RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 SPON1Q9HCB6 807 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 SEC31BQ9NQW1 1179 aa21.43■■□□□ 1.02
KRT4-201ENST00000548097 COL4A1P02462 1669 aa21.42■■□□□ 1.02
KRT4-201ENST00000548097 CSF1RP07333 972 aa21.42■■□□□ 1.02
KRT4-201ENST00000548097 ATP8B2P98198 1209 aa21.42■■□□□ 1.02
KRT4-201ENST00000548097 TAF1P21675 1872 aa21.42■■□□□ 1.02
KRT4-201ENST00000548097 BRIP1Q9BX63 1249 aa21.41■■□□□ 1.02
KRT4-201ENST00000548097 ZNF594Q96JF6 807 aaPredicted RBP21.41■■□□□ 1.02
KRT4-201ENST00000548097 HDAC5Q9UQL6 1122 aa21.41■■□□□ 1.02
KRT4-201ENST00000548097 CHRNA5P30532 468 aa21.4■■□□□ 1.02
KRT4-201ENST00000548097 PA2G4Q9UQ80 394 aaKnown RBP21.4■■□□□ 1.02
KRT4-201ENST00000548097 IGHDP01880 384 aa21.39■■□□□ 1.02
KRT4-201ENST00000548097 ITGA6P23229 1130 aa21.39■■□□□ 1.02
KRT4-201ENST00000548097 RPAP2Q8IXW5 612 aaPredicted RBP21.39■■□□□ 1.02
KRT4-201ENST00000548097 C10orf71Q711Q0 1435 aa21.39■■□□□ 1.01
KRT4-201ENST00000548097 GOLGB1Q14789 3259 aaKnown RBP21.39■■□□□ 1.01
KRT4-201ENST00000548097 SF3B3Q15393 1217 aaKnown RBP21.39■■□□□ 1.01
KRT4-201ENST00000548097 CCDC152Q4G0S7 254 aa21.39■■□□□ 1.01
KRT4-201ENST00000548097 B4GALNT3Q6L9W6 998 aa21.39■■□□□ 1.01
KRT4-201ENST00000548097 COL11A2P13942 1736 aaPredicted RBP21.38■■□□□ 1.01
KRT4-201ENST00000548097 HSP90B1P14625 803 aaKnown RBP21.38■■□□□ 1.01
KRT4-201ENST00000548097 MTX1Q13505 466 aa21.38■■□□□ 1.01
KRT4-201ENST00000548097 SLC51AQ86UW1 340 aa21.38■■□□□ 1.01
KRT4-201ENST00000548097 RFX5P48382 616 aaPredicted RBP21.37■■□□□ 1.01
KRT4-201ENST00000548097 AAMPQ13685 434 aa21.37■■□□□ 1.01
KRT4-201ENST00000548097 CCDC57Q2TAC2 916 aa21.37■■□□□ 1.01
KRT4-201ENST00000548097 WWC3Q9ULE0 1092 aa21.37■■□□□ 1.01
KRT4-201ENST00000548097 RIC1Q4ADV7 1423 aa21.37■■□□□ 1.01
KRT4-201ENST00000548097 PDE6BP35913 854 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 IFIT5Q13325 482 aaKnown RBP21.36■■□□□ 1.01
KRT4-201ENST00000548097 CRY2Q49AN0 593 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 C2CD5Q86YS7 1000 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 SSH3Q8TE77 659 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 SIL1Q9H173 461 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 KLRG2A4D1S0 409 aaPredicted RBP21.36■■□□□ 1.01
KRT4-201ENST00000548097 POLA2Q14181 598 aa21.36■■□□□ 1.01
KRT4-201ENST00000548097 RPGRQ92834 1020 aaKnown RBP21.36■■□□□ 1.01
KRT4-201ENST00000548097 CELF1Q92879 486 aaKnown RBP21.36■■□□□ 1.01
KRT4-201ENST00000548097 A0A0G2JLW4 131 aa21.35■■□□□ 1.01
KRT4-201ENST00000548097 SRGNP10124 158 aa21.35■■□□□ 1.01
KRT4-201ENST00000548097 ANKRD18BA2A2Z9 1011 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 PTPN12Q05209 780 aaKnown RBP21.34■■□□□ 1.01
KRT4-201ENST00000548097 ZNF622Q969S3 477 aaKnown RBP eCLIP21.34■■□□□ 1.01
KRT4-201ENST00000548097 PUS3Q9BZE2 481 aaKnown RBP21.34■■□□□ 1.01
KRT4-201ENST00000548097 EXOC6BQ9Y2D4 811 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 SPEF2Q9C093 1822 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 APBB1O00213 710 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 DDX46Q7L014 1031 aaKnown RBP21.34■■□□□ 1.01
KRT4-201ENST00000548097 CCDC136Q96JN2 1154 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 PPP4R2Q9NY27 417 aa21.34■■□□□ 1.01
KRT4-201ENST00000548097 KIF13BQ9NQT8 1826 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 H0YIN7 160 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 DPEP1P16444 411 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 TAF7LQ5H9L4 462 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 ERICH6BQ5W0A0 696 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 BCL11AQ9H165 835 aa21.33■■□□□ 1.01
KRT4-201ENST00000548097 LRRC24Q50LG9 513 aa21.32■■□□□ 1
KRT4-201ENST00000548097 HMMRO75330 724 aa21.32■■□□□ 1
KRT4-201ENST00000548097 SURF6O75683 361 aaKnown RBP21.32■■□□□ 1
KRT4-201ENST00000548097 HDAC1Q13547 482 aaPredicted RBP21.32■■□□□ 1
KRT4-201ENST00000548097 NLGN2Q8NFZ4 835 aa21.32■■□□□ 1
KRT4-201ENST00000548097 RBM17Q96I25 401 aaKnown RBP21.32■■□□□ 1
KRT4-201ENST00000548097 CACNA1SQ13698 1873 aa21.31■■□□□ 1
KRT4-201ENST00000548097 RWDD1Q9H446 243 aaPredicted RBP21.31■■□□□ 1
KRT4-201ENST00000548097 NPR1P16066 1061 aa21.3■■□□□ 1
KRT4-201ENST00000548097 KCNA3P22001 575 aa21.3■■□□□ 1
KRT4-201ENST00000548097 MASTLQ96GX5 879 aa21.3■■□□□ 1
KRT4-201ENST00000548097 FHDC1Q9C0D6 1143 aaPredicted RBP21.3■■□□□ 1
KRT4-201ENST00000548097 KIAA1551Q9HCM1 1747 aa21.3■■□□□ 1
KRT4-201ENST00000548097 RTL9Q8NET4 1388 aa21.3■■□□□ 1
KRT4-201ENST00000548097 HOXA10P31260 410 aaPredicted RBP21.29■■□□□ 1
KRT4-201ENST00000548097 GRAPQ13588 217 aa21.29■■□□□ 1
KRT4-201ENST00000548097 ANKRD18AQ8IVF6 992 aa21.29■■□□□ 1
KRT4-201ENST00000548097 GRAPLQ8TC17 118 aaPredicted RBP21.29■■□□□ 1
KRT4-201ENST00000548097 COPRSQ9NQ92 184 aa21.29■■□□□ 1
KRT4-201ENST00000548097 RPS8P62241 208 aaKnown RBP21.29■■□□□ 1
KRT4-201ENST00000548097 LDHAL6AQ6ZMR3 332 aa21.29■■□□□ 1
KRT4-201ENST00000548097 CDC5LQ99459 802 aaKnown RBP21.29■■□□□ 1
KRT4-201ENST00000548097 ZNF219Q9P2Y4 722 aaPredicted RBP21.29■■□□□ 1
KRT4-201ENST00000548097 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.29■■□□□ 1
KRT4-201ENST00000548097 IGHMBP2P38935 993 aaKnown RBP21.28■■□□□ 1
KRT4-201ENST00000548097 OLFM4Q6UX06 510 aa21.28■■□□□ 1
KRT4-201ENST00000548097 MPHOSPH8Q99549 860 aa21.28■■□□□ 1
KRT4-201ENST00000548097 CD2APQ9Y5K6 639 aa21.28■■□□□ 1
KRT4-201ENST00000548097 DCTPP1Q9H773 170 aa21.27■■□□□ 1
KRT4-201ENST00000548097 CNNM1Q9NRU3 951 aa21.27■■□□□ 1
KRT4-201ENST00000548097 TGFB2P61812 414 aa21.27■□□□□ 0.99
KRT4-201ENST00000548097 OS9Q13438 667 aaPredicted RBP21.27■□□□□ 0.99
KRT4-201ENST00000548097 ATG9AQ7Z3C6 839 aa21.27■□□□□ 0.99
KRT4-201ENST00000548097 CRAMP1Q96RY5 1269 aa21.27■□□□□ 0.99
KRT4-201ENST00000548097 EYA2O00167 538 aa21.26■□□□□ 0.99
KRT4-201ENST00000548097 G3BP1Q13283 466 aaKnown RBP eCLIP21.26■□□□□ 0.99
KRT4-201ENST00000548097 STYK1Q6J9G0 422 aa21.26■□□□□ 0.99
KRT4-201ENST00000548097 HELBQ8NG08 1087 aaPredicted RBP21.26■□□□□ 0.99
KRT4-201ENST00000548097 SMARCA5O60264 1052 aaPredicted RBP21.25■□□□□ 0.99
KRT4-201ENST00000548097 NOP58Q9Y2X3 529 aaKnown RBP21.25■□□□□ 0.99
KRT4-201ENST00000548097 SLX4Q8IY92 1834 aa21.25■□□□□ 0.99
KRT4-201ENST00000548097 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
KRT4-201ENST00000548097 LRP5O75197 1615 aa21.25■□□□□ 0.99
KRT4-201ENST00000548097 SASH1O94885 1247 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms