RNA–Protein interactions for RNA: ENST00000547752.5

PTPRR-206, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 2

Gene PTPRR, Length 1,729 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-206ENST00000547752 A0A0G2JLW4 131 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 ZBTB7BO15156 539 aaPredicted RBP12.14□□□□□ -0.47
PTPRR-206ENST00000547752 PDE8AO60658 829 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 PDE6BP35913 854 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 TGFB2P61812 414 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 MVPQ14764 893 aaKnown RBP12.14□□□□□ -0.47
PTPRR-206ENST00000547752 SF3B3Q15393 1217 aaKnown RBP12.14□□□□□ -0.47
PTPRR-206ENST00000547752 CRY2Q49AN0 593 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 NLRP3Q96P20 1036 aa12.14□□□□□ -0.47
PTPRR-206ENST00000547752 LAMB2P55268 1798 aa12.13□□□□□ -0.47
PTPRR-206ENST00000547752 COL11A2P13942 1736 aaPredicted RBP12.12□□□□□ -0.47
PTPRR-206ENST00000547752 CSF1RP07333 972 aa12.12□□□□□ -0.47
PTPRR-206ENST00000547752 SRGNP10124 158 aa12.12□□□□□ -0.47
PTPRR-206ENST00000547752 CTSWP56202 376 aa12.12□□□□□ -0.47
PTPRR-206ENST00000547752 ANKRD44Q8N8A2 993 aa12.12□□□□□ -0.47
PTPRR-206ENST00000547752 TTLL11Q8NHH1 800 aa12.12□□□□□ -0.47
PTPRR-206ENST00000547752 H0YIN7 160 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 UBTFL1P0CB47 393 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-206ENST00000547752 PDZRN3Q9UPQ7 1066 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 COL4A1P02462 1669 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 GNAI3P08754 354 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 NPR1P16066 1061 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 HOXA10P31260 410 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-206ENST00000547752 STYK1Q6J9G0 422 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 MASTLQ96GX5 879 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 CCDC85AQ96PX6 553 aaPredicted RBP12.11□□□□□ -0.47
PTPRR-206ENST00000547752 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
PTPRR-206ENST00000547752 BICC1Q9H694 974 aaKnown RBP12.11□□□□□ -0.47
PTPRR-206ENST00000547752 LRRFIP2Q9Y608 721 aaKnown RBP12.11□□□□□ -0.47
PTPRR-206ENST00000547752 CENPBP07199 599 aaPredicted RBP12.1□□□□□ -0.47
PTPRR-206ENST00000547752 HSP90B1P14625 803 aaKnown RBP12.1□□□□□ -0.47
PTPRR-206ENST00000547752 RABL6Q3YEC7 729 aaPredicted RBP12.1□□□□□ -0.47
PTPRR-206ENST00000547752 LMBR1LQ6UX01 489 aa12.1□□□□□ -0.47
PTPRR-206ENST00000547752 ZNF622Q969S3 477 aaKnown RBP eCLIP12.1□□□□□ -0.47
PTPRR-206ENST00000547752 SEC31BQ9NQW1 1179 aa12.1□□□□□ -0.47
PTPRR-206ENST00000547752 DDX19BQ9UMR2 479 aa12.1□□□□□ -0.47
PTPRR-206ENST00000547752 RBM17Q96I25 401 aaKnown RBP12.09□□□□□ -0.47
PTPRR-206ENST00000547752 CRAMP1Q96RY5 1269 aa12.09□□□□□ -0.47
PTPRR-206ENST00000547752 GREM2Q9H772 168 aa12.09□□□□□ -0.47
PTPRR-206ENST00000547752 C1orf115Q9H7X2 142 aa12.09□□□□□ -0.47
PTPRR-206ENST00000547752 ZBTB40Q9NUA8 1239 aa12.09□□□□□ -0.47
PTPRR-206ENST00000547752 RTL9Q8NET4 1388 aa12.09□□□□□ -0.47
PTPRR-206ENST00000547752 GNAI2P04899 355 aa12.08□□□□□ -0.47
PTPRR-206ENST00000547752 FAM161AQ3B820 660 aa12.08□□□□□ -0.47
PTPRR-206ENST00000547752 CCDC152Q4G0S7 254 aa12.08□□□□□ -0.47
PTPRR-206ENST00000547752 SLC51AQ86UW1 340 aa12.08□□□□□ -0.47
PTPRR-206ENST00000547752 RPGRQ92834 1020 aaKnown RBP12.08□□□□□ -0.47
PTPRR-206ENST00000547752 WWC3Q9ULE0 1092 aa12.08□□□□□ -0.47
PTPRR-206ENST00000547752 DLEC1Q9Y238 1755 aa12.08□□□□□ -0.48
PTPRR-206ENST00000547752 HAX1O00165 279 aa12.08□□□□□ -0.48
PTPRR-206ENST00000547752 CELF1Q92879 486 aaKnown RBP12.08□□□□□ -0.48
PTPRR-206ENST00000547752 PIM2Q9P1W9 311 aa12.08□□□□□ -0.48
PTPRR-206ENST00000547752 RFX5P48382 616 aaPredicted RBP12.07□□□□□ -0.48
PTPRR-206ENST00000547752 IRX6P78412 446 aaPredicted RBP12.07□□□□□ -0.48
PTPRR-206ENST00000547752 GRAPQ13588 217 aa12.07□□□□□ -0.48
PTPRR-206ENST00000547752 DDX46Q7L014 1031 aaKnown RBP12.07□□□□□ -0.48
PTPRR-206ENST00000547752 TTLL6Q8N841 843 aa12.07□□□□□ -0.48
PTPRR-206ENST00000547752 GRAPLQ8TC17 118 aaPredicted RBP12.07□□□□□ -0.48
PTPRR-206ENST00000547752 CNKSR1Q969H4 720 aa12.07□□□□□ -0.48
PTPRR-206ENST00000547752 MYH3P11055 1940 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 TAF1P21675 1872 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 ITGA6P23229 1130 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 BRCA1P38398 1863 aaKnown RBP12.06□□□□□ -0.48
PTPRR-206ENST00000547752 PRPF40BQ6NWY9 871 aaKnown RBP12.06□□□□□ -0.48
PTPRR-206ENST00000547752 EXOC6Q8TAG9 804 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 C7orf43Q8WVR3 580 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 HDAC5Q9UQL6 1122 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 CHMP3Q9Y3E7 222 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 SLX4Q8IY92 1834 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 ALDH1B1P30837 517 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 MTX1Q13505 466 aa12.06□□□□□ -0.48
PTPRR-206ENST00000547752 DALRD3Q5D0E6 543 aaKnown RBP12.06□□□□□ -0.48
PTPRR-206ENST00000547752 ZNF594Q96JF6 807 aaPredicted RBP12.06□□□□□ -0.48
PTPRR-206ENST00000547752 PNMA6EA0A0J9YXQ4 647 aa12.05□□□□□ -0.48
PTPRR-206ENST00000547752 ANKRD18BA2A2Z9 1011 aa12.05□□□□□ -0.48
PTPRR-206ENST00000547752 YBX3P16989 372 aaKnown RBP eCLIP12.05□□□□□ -0.48
PTPRR-206ENST00000547752 RPS8P62241 208 aaKnown RBP12.05□□□□□ -0.48
PTPRR-206ENST00000547752 ATP8B2P98198 1209 aa12.05□□□□□ -0.48
PTPRR-206ENST00000547752 IFIT5Q13325 482 aaKnown RBP12.05□□□□□ -0.48
PTPRR-206ENST00000547752 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
PTPRR-206ENST00000547752 OLFM4Q6UX06 510 aa12.05□□□□□ -0.48
PTPRR-206ENST00000547752 PPEF1O14829 653 aaPredicted RBP12.04□□□□□ -0.48
PTPRR-206ENST00000547752 BBOX1O75936 387 aa12.04□□□□□ -0.48
PTPRR-206ENST00000547752 POLA2Q14181 598 aa12.04□□□□□ -0.48
PTPRR-206ENST00000547752 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
PTPRR-206ENST00000547752 KLHDC4Q8TBB5 520 aa12.04□□□□□ -0.48
PTPRR-206ENST00000547752 CHMP4BQ9H444 224 aaKnown RBP12.04□□□□□ -0.48
PTPRR-206ENST00000547752 BCS1LQ9Y276 419 aa12.04□□□□□ -0.48
PTPRR-206ENST00000547752 PTPN12Q05209 780 aaKnown RBP12.03□□□□□ -0.48
PTPRR-206ENST00000547752 CCDC57Q2TAC2 916 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 ANKRD18AQ8IVF6 992 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 CDC5LQ99459 802 aaKnown RBP12.03□□□□□ -0.48
PTPRR-206ENST00000547752 PUS3Q9BZE2 481 aaKnown RBP12.03□□□□□ -0.48
PTPRR-206ENST00000547752 SRGAP3O43295 1099 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 C21orf2O43822 256 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 SP8Q8IXZ3 490 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 SSH3Q8TE77 659 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 PA2G4Q9UQ80 394 aaKnown RBP12.03□□□□□ -0.48
PTPRR-206ENST00000547752 ATP6V0A2Q9Y487 856 aa12.03□□□□□ -0.48
PTPRR-206ENST00000547752 PCDHB15Q9Y5E8 787 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms