RNA–Protein interactions for RNA: ENST00000547685.5

MMP19-205, Transcript of matrix metallopeptidase 19, humanhuman

TSL 2

Gene MMP19, Length 2,016 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP19-205ENST00000547685 CCDC83Q8IWF9 413 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 CACNA1FO60840 1977 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 GOLGA6L9A6NEM1 432 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 TADA3O75528 432 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 SWT1Q5T5J6 900 aaKnown RBP16.16■□□□□ 0.18
MMP19-205ENST00000547685 C10orf67Q8IYJ2 551 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 BPIFA3Q9BQP9 254 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 THUMPD2Q9BTF0 503 aaKnown RBP16.16■□□□□ 0.18
MMP19-205ENST00000547685 FAM107BQ9H098 131 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 DEF6Q9H4E7 631 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 ARFGAP3Q9NP61 516 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 JRKLQ9Y4A0 524 aa16.16■□□□□ 0.18
MMP19-205ENST00000547685 PXDNLA1KZ92 1463 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 PSMA5P28066 241 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 PSEN1P49768 467 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 CEP57L1Q8IYX8 460 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 THEMISQ8N1K5 641 aaPredicted RBP16.15■□□□□ 0.18
MMP19-205ENST00000547685 NFATC2IPQ8NCF5 419 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 ZSCAN16Q9H4T2 348 aaPredicted RBP16.15■□□□□ 0.18
MMP19-205ENST00000547685 STK26Q9P289 416 aa16.15■□□□□ 0.18
MMP19-205ENST00000547685 NRXN3Q9Y4C0 1643 aa16.14■□□□□ 0.18
MMP19-205ENST00000547685 UBR1Q8IWV7 1749 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 PSME1Q06323 249 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 CC2D1AQ6P1N0 951 aaPredicted RBP16.14■□□□□ 0.17
MMP19-205ENST00000547685 MPHOSPH8Q99549 860 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 USP42Q9H9J4 1324 aaKnown RBP16.14■□□□□ 0.17
MMP19-205ENST00000547685 E4F1Q66K89 784 aaPredicted RBP16.14■□□□□ 0.17
MMP19-205ENST00000547685 CCDC91Q7Z6B0 441 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 SECISBP2LQ93073 1101 aaKnown RBP16.14■□□□□ 0.17
MMP19-205ENST00000547685 TRERF1Q96PN7 1200 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 STAG3Q9UJ98 1225 aa16.14■□□□□ 0.17
MMP19-205ENST00000547685 POLR3GO15318 223 aaPredicted RBP16.13■□□□□ 0.17
MMP19-205ENST00000547685 TBC1D8O95759 1140 aa16.13■□□□□ 0.17
MMP19-205ENST00000547685 CPP00450 1065 aa16.13■□□□□ 0.17
MMP19-205ENST00000547685 ZKSCAN1P17029 563 aaPredicted RBP16.13■□□□□ 0.17
MMP19-205ENST00000547685 BRD3Q15059 726 aa16.13■□□□□ 0.17
MMP19-205ENST00000547685 BICD2Q8TD16 824 aa16.13■□□□□ 0.17
MMP19-205ENST00000547685 TRMT1Q9NXH9 659 aaKnown RBP16.13■□□□□ 0.17
MMP19-205ENST00000547685 POTEB2H3BUK9 544 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 SFPQP23246 707 aaKnown RBP eCLIP16.12■□□□□ 0.17
MMP19-205ENST00000547685 RABGGTAQ92696 567 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 MAP3K5Q99683 1374 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 REXO1L1PQ8IX06 675 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 HNRNPLLQ8WVV9 542 aaKnown RBP16.12■□□□□ 0.17
MMP19-205ENST00000547685 ADAM21Q9UKJ8 722 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 EXOC6BQ9Y2D4 811 aa16.12■□□□□ 0.17
MMP19-205ENST00000547685 CCDC151A5D8V7 595 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 TUBBP07437 444 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 ST5P78524 1137 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 RASEFQ8IZ41 740 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 CEP89Q96ST8 783 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 NRKQ7Z2Y5 1582 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 SOX12O15370 315 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 ZSCAN12O43309 604 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 MYO1BO43795 1136 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 KIF1CO43896 1103 aaKnown RBP16.11■□□□□ 0.17
MMP19-205ENST00000547685 NR1I2O75469 434 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
MMP19-205ENST00000547685 TACO1Q9BSH4 297 aaKnown RBP16.11■□□□□ 0.17
MMP19-205ENST00000547685 UTP14AQ9BVJ6 771 aaKnown RBP16.11■□□□□ 0.17
MMP19-205ENST00000547685 RNF216Q9NWF9 866 aaPredicted RBP16.11■□□□□ 0.17
MMP19-205ENST00000547685 HDAC5Q9UQL6 1122 aa16.11■□□□□ 0.17
MMP19-205ENST00000547685 EIF3JO75822 258 aaKnown RBP16.1■□□□□ 0.17
MMP19-205ENST00000547685 SMC2O95347 1197 aa16.1■□□□□ 0.17
MMP19-205ENST00000547685 BRD2P25440 801 aaKnown RBP16.1■□□□□ 0.17
MMP19-205ENST00000547685 HSP90AB4PQ58FF6 505 aa16.1■□□□□ 0.17
MMP19-205ENST00000547685 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
MMP19-205ENST00000547685 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
MMP19-205ENST00000547685 USP16Q9Y5T5 823 aa16.1■□□□□ 0.17
MMP19-205ENST00000547685 HIP1O00291 1037 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 HMOX1P09601 288 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 TUBB2AQ13885 445 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 KRT24Q2M2I5 525 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 TUBB2BQ9BVA1 445 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 MAP2K7O14733 419 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 LARGE1O95461 756 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 SLC4A2P04920 1241 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 ZRSR1Q15695 479 aaKnown RBP16.09■□□□□ 0.17
MMP19-205ENST00000547685 ME3Q16798 604 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 CDC37L1Q7L3B6 337 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 HOMER1Q86YM7 354 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 UNC5CLQ8IV45 518 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 EFCAB13Q8IY85 973 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 PI4K2BQ8TCG2 481 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 SSH3Q8TE77 659 aa16.09■□□□□ 0.17
MMP19-205ENST00000547685 JAKMIP1Q96N16 626 aaKnown RBP16.09■□□□□ 0.17
MMP19-205ENST00000547685 TRIM66O15016 1216 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 CORO7P57737 925 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 ARID5BQ14865 1188 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 CERS3Q8IU89 383 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 PGBD1Q96JS3 809 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 FUT8Q9BYC5 575 aa16.08■□□□□ 0.16
MMP19-205ENST00000547685 EDC4Q6P2E9 1401 aaKnown RBP16.08■□□□□ 0.16
MMP19-205ENST00000547685 EVCP57679 992 aa16.07■□□□□ 0.16
MMP19-205ENST00000547685 TPRNQ4KMQ1 711 aa16.07■□□□□ 0.16
MMP19-205ENST00000547685 CCDC73Q6ZRK6 1079 aa16.07■□□□□ 0.16
MMP19-205ENST00000547685 XRN1Q8IZH2 1706 aaKnown RBP16.07■□□□□ 0.16
MMP19-205ENST00000547685 GLRX3O76003 335 aaKnown RBP16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms