RNA–Protein interactions for RNA: ENST00000547430.2

HIF1A-205, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 2

Gene HIF1A, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-205ENST00000547430 C9orf131Q5VYM1 1079 aa11.04□□□□□ -0.64
HIF1A-205ENST00000547430 NLRP13Q86W25 1043 aa11.04□□□□□ -0.64
HIF1A-205ENST00000547430 EFSO43281 561 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 THBS1P07996 1170 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 FAM157BP0CG42 384 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 GALNT12Q8IXK2 581 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 C1orf127Q8N9H9 656 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 RNF34Q969K3 372 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 OSBPL7Q9BZF2 842 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 NPHS2Q9NP85 383 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 NLRP2Q9NX02 1062 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 CNTN3Q9P232 1028 aa11.03□□□□□ -0.64
HIF1A-205ENST00000547430 ZNF76P36508 570 aa11.02□□□□□ -0.65
HIF1A-205ENST00000547430 FIGNL1Q6PIW4 674 aa11.02□□□□□ -0.65
HIF1A-205ENST00000547430 NT5DC4Q86YG4 428 aa11.02□□□□□ -0.65
HIF1A-205ENST00000547430 KCNH4Q9UQ05 1017 aa11.02□□□□□ -0.65
HIF1A-205ENST00000547430 EREGO14944 169 aa11.01□□□□□ -0.65
HIF1A-205ENST00000547430 MAN1A2O60476 641 aa11.01□□□□□ -0.65
HIF1A-205ENST00000547430 VEGFBP49765 207 aa11.01□□□□□ -0.65
HIF1A-205ENST00000547430 UBAP2LQ14157 1087 aaKnown RBP11.01□□□□□ -0.65
HIF1A-205ENST00000547430 NAALADL2Q58DX5 795 aa11.01□□□□□ -0.65
HIF1A-205ENST00000547430 ATP13A2Q9NQ11 1180 aa11.01□□□□□ -0.65
HIF1A-205ENST00000547430 PMEPA1Q969W9 287 aa11□□□□□ -0.65
HIF1A-205ENST00000547430 SLC35F4A4IF30 521 aa10.99□□□□□ -0.65
HIF1A-205ENST00000547430 ATXN7O15265 892 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-205ENST00000547430 GFRA3O60609 400 aa10.99□□□□□ -0.65
HIF1A-205ENST00000547430 POLR3DP05423 398 aaPredicted RBP10.99□□□□□ -0.65
HIF1A-205ENST00000547430 SREK1Q8WXA9 508 aaKnown RBP10.99□□□□□ -0.65
HIF1A-205ENST00000547430 SRCIN1Q9C0H9 1055 aa10.99□□□□□ -0.65
HIF1A-205ENST00000547430 FAM8A1Q9UBU6 413 aa10.99□□□□□ -0.65
HIF1A-205ENST00000547430 PCDHGC4Q9Y5F7 938 aa10.99□□□□□ -0.65
HIF1A-205ENST00000547430 SFSWAPQ12872 951 aaKnown RBP10.98□□□□□ -0.65
HIF1A-205ENST00000547430 TTC39BQ5VTQ0 682 aaPredicted RBP10.98□□□□□ -0.65
HIF1A-205ENST00000547430 GSX2Q9BZM3 304 aa10.98□□□□□ -0.65
HIF1A-205ENST00000547430 TGIF2Q9GZN2 237 aa10.98□□□□□ -0.65
HIF1A-205ENST00000547430 AAASQ9NRG9 546 aa10.98□□□□□ -0.65
HIF1A-205ENST00000547430 LOC105371045A0A1W2PR82 267 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 PTSQ03393 145 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 LAMC2Q13753 1193 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 CCINQ13939 588 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 NUCKS1Q9H1E3 243 aaKnown RBP10.97□□□□□ -0.65
HIF1A-205ENST00000547430 SUV39H2Q9H5I1 410 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 USP31Q70CQ4 1352 aa10.97□□□□□ -0.65
HIF1A-205ENST00000547430 DCDC2BA2VCK2 349 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 SOBPA7XYQ1 873 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 ST8SIA5O15466 376 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 SASH3O75995 380 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 CES1P23141 567 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 TNP2Q05952 138 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 RIPOR1Q6ZS17 1223 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 BCO2Q9BYV7 579 aa10.96□□□□□ -0.65
HIF1A-205ENST00000547430 KHNYNO15037 678 aaKnown RBP10.95□□□□□ -0.66
HIF1A-205ENST00000547430 CYP2E1P05181 493 aaPredicted RBP10.95□□□□□ -0.66
HIF1A-205ENST00000547430 USP17L7P0C7H9 530 aa10.95□□□□□ -0.66
HIF1A-205ENST00000547430 PTPN12Q05209 780 aaKnown RBP10.95□□□□□ -0.66
HIF1A-205ENST00000547430 KIAA0319Q5VV43 1072 aa10.95□□□□□ -0.66
HIF1A-205ENST00000547430 NXPE4Q6UWF7 544 aa10.95□□□□□ -0.66
HIF1A-205ENST00000547430 OR13H1Q8NG92 308 aa10.95□□□□□ -0.66
HIF1A-205ENST00000547430 NDFIP2Q9NV92 336 aa10.95□□□□□ -0.66
HIF1A-205ENST00000547430 POTECB2RU33 542 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 H7C1W4 665 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
HIF1A-205ENST00000547430 MAPTP10636 758 aaKnown RBP10.94□□□□□ -0.66
HIF1A-205ENST00000547430 TARSP26639 723 aaKnown RBP10.94□□□□□ -0.66
HIF1A-205ENST00000547430 GRM2Q14416 872 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 DRC1Q96MC2 740 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 STRN4Q9NRL3 753 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 HCN2Q9UL51 889 aa10.94□□□□□ -0.66
HIF1A-205ENST00000547430 MMP20O60882 483 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 ST13P50502 369 aaKnown RBP10.93□□□□□ -0.66
HIF1A-205ENST00000547430 DBN1Q16643 649 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 MEI1Q5TIA1 1274 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 KRT25Q7Z3Z0 450 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 TRIM22Q8IYM9 498 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 TINF2Q9BSI4 451 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 EFCC1Q9HA90 598 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 ZFATQ9P243 1243 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 KANSL3Q9P2N6 904 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 DACH1Q9UI36 760 aa10.93□□□□□ -0.66
HIF1A-205ENST00000547430 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.93□□□□□ -0.66
HIF1A-205ENST00000547430 BNIP3LO60238 219 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 RARAP10276 462 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 EDN3P14138 238 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 LAPTM4AQ15012 233 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 SF3A1Q15459 793 aaKnown RBP10.92□□□□□ -0.66
HIF1A-205ENST00000547430 TAF1CQ15572 869 aaPredicted RBP10.92□□□□□ -0.66
HIF1A-205ENST00000547430 PEAR1Q5VY43 1037 aaPredicted RBP10.92□□□□□ -0.66
HIF1A-205ENST00000547430 GLIS3Q8NEA6 775 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 CCSER2Q9H7U1 834 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 CUEDC1Q9NWM3 386 aaPredicted RBP10.92□□□□□ -0.66
HIF1A-205ENST00000547430 SALL4Q9UJQ4 1053 aa10.92□□□□□ -0.66
HIF1A-205ENST00000547430 A0A1W2PP55 124 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 PHF20L1A8MW92 1017 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 SOX18P35713 384 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 HS2ST1Q7LGA3 356 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 CCDC155Q8N6L0 562 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 GMCL1Q96IK5 515 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 LATS2Q9NRM7 1088 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 MARK1Q9P0L2 795 aa10.91□□□□□ -0.66
HIF1A-205ENST00000547430 HOXD8P13378 290 aaPredicted RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms