RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 IQSEC3Q9UPP2 1182 aaPredicted RBP15.25■□□□□ 0.03
SCAF11-209ENST00000547018 RFX5P48382 616 aaPredicted RBP15.24■□□□□ 0.03
SCAF11-209ENST00000547018 LDHAL6AQ6ZMR3 332 aa15.24■□□□□ 0.03
SCAF11-209ENST00000547018 GRPEL1Q9HAV7 217 aa15.24■□□□□ 0.03
SCAF11-209ENST00000547018 CWC22Q9HCG8 908 aaKnown RBP15.24■□□□□ 0.03
SCAF11-209ENST00000547018 COPRSQ9NQ92 184 aa15.24■□□□□ 0.03
SCAF11-209ENST00000547018 COL5A2P05997 1499 aaPredicted RBP15.24■□□□□ 0.03
SCAF11-209ENST00000547018 PLCB2Q00722 1185 aa15.24■□□□□ 0.03
SCAF11-209ENST00000547018 LIMCH1Q9UPQ0 1083 aa15.24■□□□□ 0.03
SCAF11-209ENST00000547018 KCNQ2O43526 872 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
SCAF11-209ENST00000547018 METTL24Q5JXM2 366 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 BLOC1S2Q6QNY1 142 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 C8orf37Q96NL8 207 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 SLC4A9Q96Q91 983 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-209ENST00000547018 OVOS2A0A0G2JMS6 1433 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 SYCE3A1L190 88 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 SLC27A2O14975 620 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 GADD45BO75293 160 aaPredicted RBP15.23■□□□□ 0.03
SCAF11-209ENST00000547018 ATP6V1AP38606 617 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 DDB1Q16531 1140 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 AOX1Q06278 1338 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 TTC39AQ5SRH9 613 aa15.23■□□□□ 0.03
SCAF11-209ENST00000547018 CPDO75976 1380 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 H7C1W4 665 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 GJB2P29033 226 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 ANAPC15P60006 121 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 TCIRG1Q13488 830 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 FAM98CQ17RN3 349 aaKnown RBP15.22■□□□□ 0.03
SCAF11-209ENST00000547018 GREM2Q9H772 168 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 NCOA3Q9Y6Q9 1424 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 KDM3BQ7LBC6 1761 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 CEBPZQ03701 1054 aaKnown RBP15.22■□□□□ 0.03
SCAF11-209ENST00000547018 TTLL5Q6EMB2 1281 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 DZIP3Q86Y13 1208 aaKnown RBP15.22■□□□□ 0.03
SCAF11-209ENST00000547018 LMBRD1Q9NUN5 540 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 CNPY2Q9Y2B0 182 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 LMO7Q8WWI1 1683 aa15.22■□□□□ 0.03
SCAF11-209ENST00000547018 EYA2O00167 538 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 MCM2P49736 904 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 ME3Q16798 604 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 CCDC191Q8NCU4 936 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 TAF5LO75529 589 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 APPP05067 770 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 ATG9AQ7Z3C6 839 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 PAG1Q9NWQ8 432 aa15.21■□□□□ 0.03
SCAF11-209ENST00000547018 DCCP43146 1447 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 IDH1O75874 414 aaKnown RBP15.2■□□□□ 0.02
SCAF11-209ENST00000547018 CCT2P78371 535 aaKnown RBP15.2■□□□□ 0.02
SCAF11-209ENST00000547018 GPT2Q8TD30 523 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 NGLY1Q96IV0 654 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 KIF1AQ12756 1690 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 UTYO14607 1347 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 ALS2Q96Q42 1657 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 IRS4O14654 1257 aaPredicted RBP15.2■□□□□ 0.02
SCAF11-209ENST00000547018 SYT1P21579 422 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 SCARF1Q14162 830 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 RNF20Q5VTR2 975 aa15.2■□□□□ 0.02
SCAF11-209ENST00000547018 ITGA6P23229 1130 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 CASP7P55210 303 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 SKOR2Q2VWA4 1001 aaPredicted RBP15.19■□□□□ 0.02
SCAF11-209ENST00000547018 TFIP11Q9UBB9 837 aaKnown RBP15.19■□□□□ 0.02
SCAF11-209ENST00000547018 GTF2E1P29083 439 aaPredicted RBP15.19■□□□□ 0.02
SCAF11-209ENST00000547018 NPHP1O15259 732 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 ATP5JP18859 108 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 GUCY1B3Q02153 619 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 XAGE2Q96GT9 111 aa15.19■□□□□ 0.02
SCAF11-209ENST00000547018 IL15P40933 162 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-209ENST00000547018 NECTIN1Q15223 517 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 CCDC158Q5M9N0 1113 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 LARP1BQ659C4 914 aaKnown RBP15.18■□□□□ 0.02
SCAF11-209ENST00000547018 BRF1Q92994 677 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 TRIM44Q96DX7 344 aaPredicted RBP15.18■□□□□ 0.02
SCAF11-209ENST00000547018 EP400Q96L91 3159 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 ZSCAN23Q3MJ62 389 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 STX6O43752 255 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 USP48Q86UV5 1035 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 MAP4K1Q92918 833 aa15.18■□□□□ 0.02
SCAF11-209ENST00000547018 HIP1O00291 1037 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 ZAP70P43403 619 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 DNM1Q05193 864 aaKnown RBP15.17■□□□□ 0.02
SCAF11-209ENST00000547018 RABL6Q3YEC7 729 aaPredicted RBP15.17■□□□□ 0.02
SCAF11-209ENST00000547018 PTF1AQ7RTS3 328 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 C5P01031 1676 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 JAK2O60674 1132 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 MRE11P49959 708 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 KLHL40Q2TBA0 621 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 TMEM63CQ9P1W3 806 aa15.17■□□□□ 0.02
SCAF11-209ENST00000547018 MCMDC2Q4G0Z9 681 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 ANP32BQ92688 251 aaKnown RBP15.16■□□□□ 0.02
SCAF11-209ENST00000547018 NCOA5Q9HCD5 579 aaKnown RBP15.16■□□□□ 0.02
SCAF11-209ENST00000547018 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-209ENST00000547018 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.16■□□□□ 0.02
SCAF11-209ENST00000547018 UBAP1LF5GYI3 381 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 BRD1O95696 1058 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 CYP21A2P08686 494 aa15.16■□□□□ 0.02
SCAF11-209ENST00000547018 Q6ZUG5 572 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms