RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 SCAND2PQ9GZW5 306 aaPredicted RBP13.8□□□□□ -0.2
CHERP-203ENST00000546361 DACH1Q9UI36 760 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 RIMBP2O15034 1052 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 MCM5P33992 734 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 SSRP1Q08945 709 aaKnown RBP13.8□□□□□ -0.2
CHERP-203ENST00000546361 MCMDC2Q4G0Z9 681 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 TFCP2Q12800 502 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 CCDC191Q8NCU4 936 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 TANGO6Q9C0B7 1094 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 PAG1Q9NWQ8 432 aa13.8□□□□□ -0.2
CHERP-203ENST00000546361 PDCL3Q9H2J4 239 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 CHMP4BP1P59074 171 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 TBC1D2Q9BYX2 928 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 CCDC87Q9NVE4 849 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 KDM5DQ9BY66 1539 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 TNIP1Q15025 636 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 CUL5Q93034 780 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 RBM8AQ9Y5S9 174 aaKnown RBP13.79□□□□□ -0.2
CHERP-203ENST00000546361 PLEKHG1Q9ULL1 1385 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 ESR2Q92731 530 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 JAG2Q9Y219 1238 aa13.79□□□□□ -0.2
CHERP-203ENST00000546361 APBA3O96018 575 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 SYCP1Q15431 976 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 LRRC2Q9BYS8 371 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 ANKRD2Q9GZV1 360 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 METAP2P50579 478 aaKnown RBP eCLIP13.78□□□□□ -0.23e-6■■□□□ 11.5
CHERP-203ENST00000546361 PICALMQ13492 652 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 RBM26Q5T8P6 1007 aaKnown RBP13.78□□□□□ -0.2
CHERP-203ENST00000546361 CCDC24Q8N4L8 307 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 IL17REQ8NFR9 667 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 SMARCE1Q969G3 411 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 TFIP11Q9UBB9 837 aaKnown RBP13.78□□□□□ -0.2
CHERP-203ENST00000546361 ARAP3Q8WWN8 1544 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 NPHP4O75161 1426 aaPredicted RBP13.78□□□□□ -0.2
CHERP-203ENST00000546361 WTAPQ15007 396 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 EYA3Q99504 573 aa13.78□□□□□ -0.2
CHERP-203ENST00000546361 ZNHIT6Q9NWK9 470 aaKnown RBP13.78□□□□□ -0.2
CHERP-203ENST00000546361 SBNO2Q9Y2G9 1366 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 ERVV-2B6SEH9 535 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 EYA2O00167 538 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 ZBTB7BO15156 539 aaPredicted RBP13.77□□□□□ -0.2
CHERP-203ENST00000546361 EIF4A1P60842 406 aaKnown RBP13.77□□□□□ -0.2
CHERP-203ENST00000546361 SPC24Q8NBT2 197 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 RAB34Q9BZG1 259 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 PLXNC1O60486 1568 aa13.77□□□□□ -0.2
CHERP-203ENST00000546361 MPNDQ8N594 471 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 EFCAB6Q5THR3 1501 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 KLF18A0A0U1RQI7 1052 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 ITGA6P23229 1130 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 SMC5Q8IY18 1101 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 KLHDC4Q8TBB5 520 aa13.77□□□□□ -0.21
CHERP-203ENST00000546361 TSPY3P0CV98 308 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 TSPY8P0CW00 308 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 MIGA1Q8NAN2 632 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 ARHGEF25Q86VW2 580 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 MNS1Q8NEH6 495 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 VEZTQ9HBM0 779 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 CLEC11AQ9Y240 323 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 TTC41PQ6P2S7 1318 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 PHKG2P15735 406 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 PPFIBP1Q86W92 1011 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 SLC26A6Q9BXS9 759 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 KRT23Q9C075 422 aa13.76□□□□□ -0.21
CHERP-203ENST00000546361 ZNF335Q9H4Z2 1342 aaPredicted RBP13.76□□□□□ -0.21
CHERP-203ENST00000546361 PDE8AO60658 829 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 TRMT1LQ7Z2T5 733 aaKnown RBP13.75□□□□□ -0.21
CHERP-203ENST00000546361 TMTC2Q8N394 836 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 CCDC12Q8WUD4 166 aaPredicted RBP13.75□□□□□ -0.21
CHERP-203ENST00000546361 USP19O94966 1318 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 MCM9Q9NXL9 1143 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 CCDC39Q9UFE4 941 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 KIAA0232Q92628 1395 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 ROBO2Q9HCK4 1378 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 PLA2R1Q13018 1463 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 ZBTB43O43298 467 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 LDHBP07195 334 aaKnown RBP13.75□□□□□ -0.21
CHERP-203ENST00000546361 NBPF7P0C2Y1 421 aaPredicted RBP13.75□□□□□ -0.21
CHERP-203ENST00000546361 IBSPP21815 317 aaPredicted RBP13.75□□□□□ -0.21
CHERP-203ENST00000546361 MAP3K11Q16584 847 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 FAM43AQ8N2R8 423 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 A0A1B0GUL7 405 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 KCNQ3O43525 872 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 CAMK4Q16566 473 aa13.75□□□□□ -0.21
CHERP-203ENST00000546361 SPATA31E1Q6ZUB1 1445 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 MAGEB6P1A0A0J9YX57 407 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 GJB2P29033 226 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 NMIQ13287 307 aaPredicted RBP13.74□□□□□ -0.21
CHERP-203ENST00000546361 NECAB1Q8N987 351 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 CNNM2Q9H8M5 875 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 INSRP06213 1382 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 GIGYF1O75420 1035 aaPredicted RBP13.74□□□□□ -0.21
CHERP-203ENST00000546361 MAGEB6Q8N7X4 407 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 TBC1D32Q96NH3 1257 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 ABCA9Q8IUA7 1624 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 UGGT1Q9NYU2 1555 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 MYCNP04198 464 aaPredicted RBP13.74□□□□□ -0.21
CHERP-203ENST00000546361 PLCG2P16885 1265 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 BAG6P46379 1132 aa13.74□□□□□ -0.21
CHERP-203ENST00000546361 GCKRQ14397 625 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms