RNA–Protein interactions for RNA: ENST00000546281.5

LMO3-234, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 496 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-234ENST00000546281 CEP85Q6P2H3 762 aa15.46■□□□□ 0.07
LMO3-234ENST00000546281 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
LMO3-234ENST00000546281 C1orf115Q9H7X2 142 aa15.46■□□□□ 0.07
LMO3-234ENST00000546281 PCDHB15Q9Y5E8 787 aa15.46■□□□□ 0.07
LMO3-234ENST00000546281 SRGNP10124 158 aa15.45■□□□□ 0.06
LMO3-234ENST00000546281 RFX5P48382 616 aaPredicted RBP15.45■□□□□ 0.06
LMO3-234ENST00000546281 POLA2Q14181 598 aa15.45■□□□□ 0.06
LMO3-234ENST00000546281 CCDC152Q4G0S7 254 aa15.45■□□□□ 0.06
LMO3-234ENST00000546281 SSH3Q8TE77 659 aa15.45■□□□□ 0.06
LMO3-234ENST00000546281 NEFLP07196 543 aa15.44■□□□□ 0.06
LMO3-234ENST00000546281 KCNA3P22001 575 aa15.44■□□□□ 0.06
LMO3-234ENST00000546281 CRAMP1Q96RY5 1269 aa15.44■□□□□ 0.06
LMO3-234ENST00000546281 GREM2Q9H772 168 aa15.44■□□□□ 0.06
LMO3-234ENST00000546281 PNMA6EA0A0J9YXQ4 647 aa15.43■□□□□ 0.06
LMO3-234ENST00000546281 H0YIN7 160 aa15.43■□□□□ 0.06
LMO3-234ENST00000546281 NPR1P16066 1061 aa15.43■□□□□ 0.06
LMO3-234ENST00000546281 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
LMO3-234ENST00000546281 ITGA6P23229 1130 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 FAM161AQ3B820 660 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 STYK1Q6J9G0 422 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 C2CD5Q86YS7 1000 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 MASTLQ96GX5 879 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 SEC31BQ9NQW1 1179 aa15.42■□□□□ 0.06
LMO3-234ENST00000546281 SRGAP3O43295 1099 aa15.41■□□□□ 0.06
LMO3-234ENST00000546281 PTPN12Q05209 780 aaKnown RBP15.41■□□□□ 0.06
LMO3-234ENST00000546281 IFIT5Q13325 482 aaKnown RBP15.41■□□□□ 0.06
LMO3-234ENST00000546281 HDAC1Q13547 482 aaPredicted RBP15.41■□□□□ 0.06
LMO3-234ENST00000546281 DDX46Q7L014 1031 aaKnown RBP15.41■□□□□ 0.06
LMO3-234ENST00000546281 RBM17Q96I25 401 aaKnown RBP15.41■□□□□ 0.06
LMO3-234ENST00000546281 COPRSQ9NQ92 184 aa15.41■□□□□ 0.06
LMO3-234ENST00000546281 DDX60Q8IY21 1712 aaKnown RBP15.4■□□□□ 0.06
LMO3-234ENST00000546281 ANKRD18BA2A2Z9 1011 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 BBOX1O75936 387 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 DPEP1P16444 411 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 CHRNA5P30532 468 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 ALDH1B1P30837 517 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 CCDC57Q2TAC2 916 aa15.4■□□□□ 0.06
LMO3-234ENST00000546281 RPGRQ92834 1020 aaKnown RBP15.4■□□□□ 0.06
LMO3-234ENST00000546281 CCDC85AQ96PX6 553 aaPredicted RBP15.4■□□□□ 0.06
LMO3-234ENST00000546281 NOP58Q9Y2X3 529 aaKnown RBP15.4■□□□□ 0.06
LMO3-234ENST00000546281 A0A0G2JLW4 131 aa15.39■□□□□ 0.05
LMO3-234ENST00000546281 HMMRO75330 724 aa15.39■□□□□ 0.05
LMO3-234ENST00000546281 RPS8P62241 208 aaKnown RBP15.39■□□□□ 0.05
LMO3-234ENST00000546281 GRAPQ13588 217 aa15.39■□□□□ 0.05
LMO3-234ENST00000546281 GRAPLQ8TC17 118 aaPredicted RBP15.39■□□□□ 0.05
LMO3-234ENST00000546281 CELF1Q92879 486 aaKnown RBP15.39■□□□□ 0.05
LMO3-234ENST00000546281 CDC5LQ99459 802 aaKnown RBP15.39■□□□□ 0.05
LMO3-234ENST00000546281 FHDC1Q9C0D6 1143 aaPredicted RBP15.39■□□□□ 0.05
LMO3-234ENST00000546281 FBXO3Q9UK99 471 aa15.39■□□□□ 0.05
LMO3-234ENST00000546281 TNRC6CQ9HCJ0 1690 aaKnown RBP15.38■□□□□ 0.05
LMO3-234ENST00000546281 GOLGB1Q14789 3259 aaKnown RBP15.38■□□□□ 0.05
LMO3-234ENST00000546281 CNKSR1Q969H4 720 aa15.38■□□□□ 0.05
LMO3-234ENST00000546281 SYT17Q9BSW7 474 aa15.38■□□□□ 0.05
LMO3-234ENST00000546281 BSDC1Q9NW68 430 aaPredicted RBP15.38■□□□□ 0.05
LMO3-234ENST00000546281 CHMP3Q9Y3E7 222 aa15.38■□□□□ 0.05
LMO3-234ENST00000546281 LAMB2P55268 1798 aa15.38■□□□□ 0.05
LMO3-234ENST00000546281 ANKRD31Q8N7Z5 1873 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 CIAO1O76071 339 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 TMC4Q7Z404 712 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 ANKRD18AQ8IVF6 992 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 C7orf43Q8WVR3 580 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 ZNF594Q96JF6 807 aaPredicted RBP15.37■□□□□ 0.05
LMO3-234ENST00000546281 DCTPP1Q9H773 170 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 RIPOR2Q9Y4F9 1068 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 KIF13BQ9NQT8 1826 aa15.37■□□□□ 0.05
LMO3-234ENST00000546281 IGHDP01880 384 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 ATG9AQ7Z3C6 839 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 TTLL6Q8N841 843 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 NLGN2Q8NFZ4 835 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 KLHDC4Q8TBB5 520 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 ZNF622Q969S3 477 aaKnown RBP eCLIP15.36■□□□□ 0.05
LMO3-234ENST00000546281 RWDD1Q9H446 243 aaPredicted RBP15.36■□□□□ 0.05
LMO3-234ENST00000546281 PIM2Q9P1W9 311 aa15.36■□□□□ 0.05
LMO3-234ENST00000546281 PPP1R1BQ9UD71 204 aaPredicted RBP15.36■□□□□ 0.05
LMO3-234ENST00000546281 PA2G4Q9UQ80 394 aaKnown RBP15.36■□□□□ 0.05
LMO3-234ENST00000546281 EYA2O00167 538 aa15.35■□□□□ 0.05
LMO3-234ENST00000546281 IGHMBP2P38935 993 aaKnown RBP15.35■□□□□ 0.05
LMO3-234ENST00000546281 LDHAL6AQ6ZMR3 332 aa15.35■□□□□ 0.05
LMO3-234ENST00000546281 SP8Q8IXZ3 490 aa15.35■□□□□ 0.05
LMO3-234ENST00000546281 PUS3Q9BZE2 481 aaKnown RBP15.35■□□□□ 0.05
LMO3-234ENST00000546281 LRRC24Q50LG9 513 aa15.34■□□□□ 0.05
LMO3-234ENST00000546281 PRPF40BQ6NWY9 871 aaKnown RBP15.34■□□□□ 0.05
LMO3-234ENST00000546281 MPHOSPH8Q99549 860 aa15.34■□□□□ 0.05
LMO3-234ENST00000546281 PPP4R2Q9NY27 417 aa15.34■□□□□ 0.05
LMO3-234ENST00000546281 MINPP1Q9UNW1 487 aa15.34■□□□□ 0.05
LMO3-234ENST00000546281 ATP6V0A2Q9Y487 856 aa15.34■□□□□ 0.05
LMO3-234ENST00000546281 LRP5O75197 1615 aa15.33■□□□□ 0.04
LMO3-234ENST00000546281 COL4A1P02462 1669 aa15.33■□□□□ 0.04
LMO3-234ENST00000546281 SURF6O75683 361 aaKnown RBP15.33■□□□□ 0.04
LMO3-234ENST00000546281 IL15P40933 162 aaPredicted RBP15.33■□□□□ 0.04
LMO3-234ENST00000546281 HSP90AB4PQ58FF6 505 aa15.33■□□□□ 0.04
LMO3-234ENST00000546281 DALRD3Q5D0E6 543 aaKnown RBP15.33■□□□□ 0.04
LMO3-234ENST00000546281 TAF7LQ5H9L4 462 aa15.33■□□□□ 0.04
LMO3-234ENST00000546281 KIAA1551Q9HCM1 1747 aa15.32■□□□□ 0.04
LMO3-234ENST00000546281 PPEF1O14829 653 aaPredicted RBP15.32■□□□□ 0.04
LMO3-234ENST00000546281 RAB11FIP3O75154 756 aa15.32■□□□□ 0.04
LMO3-234ENST00000546281 G3BP1Q13283 466 aaKnown RBP eCLIP15.32■□□□□ 0.04
LMO3-234ENST00000546281 CC2D2BQ6DHV5 1058 aa15.32■□□□□ 0.04
LMO3-234ENST00000546281 SMC5Q8IY18 1101 aa15.32■□□□□ 0.04
LMO3-234ENST00000546281 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms