RNA–Protein interactions for RNA: ENST00000545913.5

CIT-217, Transcript of citron rho-interacting serine/threonine kinase, humanhuman

TSL 5

Gene CIT, Length 8,520 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIT-217ENST00000545913 TTC12Q9H892 705 aaPredicted RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 IDEP14735 1019 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 WTAPQ15007 396 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 IKBKGQ9Y6K9 419 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 TBCAO75347 108 aaKnown RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 ADAMTS2O95450 1211 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 RBM25P49756 843 aaKnown RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 ACTN2P35609 894 aa13.4□□□□□ -0.26
CIT-217ENST00000545913 SMARCC1Q92922 1105 aaPredicted RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.4□□□□□ -0.265e-7■■■□□ 17.2
CIT-217ENST00000545913 IFIT1BQ5T764 474 aaKnown RBP13.4□□□□□ -0.26
CIT-217ENST00000545913 PI4KAP2A4QPH2 592 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 CKAP4Q07065 602 aaKnown RBP13.39□□□□□ -0.27
CIT-217ENST00000545913 PI4KAP1Q8N8J0 262 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 ZBTB3Q9H5J0 574 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 CCDC171Q6TFL3 1326 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 STAT6P42226 847 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 SREK1Q8WXA9 508 aaKnown RBP13.39□□□□□ -0.27
CIT-217ENST00000545913 NGLY1Q96IV0 654 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 TRIM47Q96LD4 638 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 CEP63Q96MT8 703 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 TBC1D32Q96NH3 1257 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 PRC1O43663 620 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 RFC4P35249 363 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 NUCB1Q02818 461 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 TFIP11Q9UBB9 837 aaKnown RBP13.39□□□□□ -0.27
CIT-217ENST00000545913 TSPY3P0CV98 308 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 TSPY8P0CW00 308 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 TSNARE1Q96NA8 513 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 MBIPQ9NS73 344 aa13.39□□□□□ -0.27
CIT-217ENST00000545913 CEP135Q66GS9 1140 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 HOMER2Q9NSB8 354 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 COMMD10Q9Y6G5 202 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 HDAC1Q13547 482 aaPredicted RBP13.38□□□□□ -0.27
CIT-217ENST00000545913 KLHL40Q2TBA0 621 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 CEP112Q8N8E3 955 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 ESR2Q92731 530 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 LRRC45Q96CN5 670 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 VAT1LQ9HCJ6 419 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 STX8Q9UNK0 236 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 ZBTB43O43298 467 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 ARHGAP45Q92619 1136 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 UBASH3AP57075 661 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 HAND2P61296 217 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 GRIPAP1Q4V328 841 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 BICD1Q96G01 975 aa13.38□□□□□ -0.27
CIT-217ENST00000545913 GNAQP50148 359 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 ADGRF5Q8IZF2 1346 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 SPDYE4A6NLX3 237 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 ZSCAN22P10073 491 aaPredicted RBP13.37□□□□□ -0.27
CIT-217ENST00000545913 KRT28Q7Z3Y7 464 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 N4BP3O15049 544 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 KIAA0753Q2KHM9 967 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 RNF187Q5TA31 235 aaPredicted RBP13.37□□□□□ -0.27
CIT-217ENST00000545913 SELENOOQ9BVL4 669 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 PUF60Q9UHX1 559 aaKnown RBP13.37□□□□□ -0.27
CIT-217ENST00000545913 POLR3GO15318 223 aaPredicted RBP13.37□□□□□ -0.27
CIT-217ENST00000545913 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■□□□□ 8.6
CIT-217ENST00000545913 PRPHP41219 470 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 CBX1P83916 185 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 GDPD2Q9HCC8 539 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 ADGBQ8N7X0 1667 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 HSF2BPO75031 334 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 CADPS2Q86UW7 1296 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 PRIMPOLQ96LW4 560 aa13.37□□□□□ -0.27
CIT-217ENST00000545913 LIG1P18858 919 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 CYLC1P35663 651 aaPredicted RBP13.36□□□□□ -0.27
CIT-217ENST00000545913 RTN1Q16799 776 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 DYNC1I1O14576 645 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 FERP16591 822 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 ATP5J2-PTCD1G3V325 749 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 MAATS1Q7Z4T9 603 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 SYNCQ9H7C4 482 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 CCDC155Q8N6L0 562 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 PABPN1LA6NDY0 278 aaKnown RBP13.36□□□□□ -0.27
CIT-217ENST00000545913 IDI1Q13907 227 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
CIT-217ENST00000545913 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 ZSCAN23Q3MJ62 389 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 C6orf163Q5TEZ5 329 aa13.36□□□□□ -0.27
CIT-217ENST00000545913 LARP6Q9BRS8 491 aaKnown RBP13.36□□□□□ -0.27
CIT-217ENST00000545913 LMAN1P49257 510 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 RASAL2Q9UJF2 1139 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 KDM5AP29375 1690 aaKnown RBP13.35□□□□□ -0.27
CIT-217ENST00000545913 MCMDC2Q4G0Z9 681 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 ANKRD24Q8TF21 1146 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 MSH6P52701 1360 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 GRM8O00222 908 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 PPM1FP49593 454 aaPredicted RBP13.35□□□□□ -0.27
CIT-217ENST00000545913 GNG11P61952 73 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 LRSAM1Q6UWE0 723 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 DMRT2Q9Y5R5 561 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 MYCNP04198 464 aaPredicted RBP13.35□□□□□ -0.27
CIT-217ENST00000545913 SPAG1Q07617 926 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 KIF1BO60333 1816 aa13.35□□□□□ -0.27
CIT-217ENST00000545913 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms