RNA–Protein interactions for RNA: ENST00000545658.1

LRP6-207, Transcript of LDL receptor related protein 6, humanhuman

TSL 3

Gene LRP6, Length 435 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-207ENST00000545658 ARHGAP35Q9NRY4 1499 aa6.39□□□□□ -1.39
LRP6-207ENST00000545658 GPATCH8Q9UKJ3 1502 aaKnown RBP6.39□□□□□ -1.39
LRP6-207ENST00000545658 COL16A1Q07092 1604 aaPredicted RBP6.39□□□□□ -1.39
LRP6-207ENST00000545658 LRRIQ1Q96JM4 1722 aa6.39□□□□□ -1.39
LRP6-207ENST00000545658 A0A1W2PNR3 127 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 BACH1O14867 736 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 LTKP29376 864 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 CTBSQ01459 385 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 KANK3Q6NY19 840 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 PODNQ7Z5L7 613 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 TXNDC2Q86VQ3 553 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 ZNF295-AS1Q8N0V1 137 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 C1orf216Q8TAB5 229 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 NDFIP2Q9NV92 336 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 SLAIN2Q9P270 581 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 IQSEC3Q9UPP2 1182 aaPredicted RBP6.38□□□□□ -1.39
LRP6-207ENST00000545658 ARHGAP23Q9P227 1491 aa6.38□□□□□ -1.39
LRP6-207ENST00000545658 SLIT1O75093 1534 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 NCOA2Q15596 1464 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 CCDC18Q5T9S5 1454 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 RTEL1-TNFRSF6BF6WH68 1400 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 EEA1Q15075 1411 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 MSH6P52701 1360 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 C2CD2LO14523 706 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 KCNA6P17658 529 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 TATP17735 454 aaPredicted RBP6.37□□□□□ -1.39
LRP6-207ENST00000545658 TBCELQ5QJ74 424 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 FIGNL1Q6PIW4 674 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 PROSER2Q86WR7 435 aaPredicted RBP6.37□□□□□ -1.39
LRP6-207ENST00000545658 BEND7Q8N7W2 519 aaPredicted RBP6.37□□□□□ -1.39
LRP6-207ENST00000545658 GALNT6Q8NCL4 622 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 CLUAP1Q96AJ1 413 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 DNAAF2Q9NVR5 837 aaKnown RBP6.37□□□□□ -1.39
LRP6-207ENST00000545658 CFDP1Q9UEE9 299 aaPredicted RBP6.37□□□□□ -1.39
LRP6-207ENST00000545658 PCDHGC4Q9Y5F7 938 aa6.37□□□□□ -1.39
LRP6-207ENST00000545658 TIAM1Q13009 1591 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 PRDM15P57071 1507 aaPredicted RBP6.36□□□□□ -1.39
LRP6-207ENST00000545658 ERVK-7P63135 1459 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 ATAD2Q6PL18 1390 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 AFF2P51816 1311 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 DCDC2BA2VCK2 349 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 USP17L3A6NCW0 530 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 USP17L4A6NCW7 530 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 PHF20L1A8MW92 1017 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 SHISA8B8ZZ34 492 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 ATXN7O15265 892 aaPredicted RBP6.36□□□□□ -1.39
LRP6-207ENST00000545658 TMEM132AQ24JP5 1023 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 GPAT2Q6NUI2 795 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 USP17L2Q6R6M4 530 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 BICDL1Q6ZP65 573 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 C1orf229Q6ZS94 237 aaPredicted RBP6.36□□□□□ -1.39
LRP6-207ENST00000545658 USP17L1Q7RTZ2 530 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 NLRP8Q86W28 1048 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 TRIM50Q86XT4 487 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 TNS4Q8IZW8 715 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 UCN2Q96RP3 112 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 LRRC4BQ9NT99 713 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 SCHIP1Q9P0W5 487 aaPredicted RBP6.36□□□□□ -1.39
LRP6-207ENST00000545658 GJA3Q9Y6H8 435 aa6.36□□□□□ -1.39
LRP6-207ENST00000545658 ATP9BO43861 1147 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 TXLNAP40222 546 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 RBM6P78332 1123 aaKnown RBP6.35□□□□□ -1.39
LRP6-207ENST00000545658 SLC9A9Q8IVB4 645 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 GOLGA6L1Q8N7Z2 621 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 TPCN2Q8NHX9 752 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 ZDHHC1Q8WTX9 485 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 EDARADDQ8WWZ3 215 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 ZIC5Q96T25 663 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 RRAGCQ9HB90 399 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 ZDHHC3Q9NYG2 299 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 GGA1Q9UJY5 639 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 GDF2Q9UK05 429 aaPredicted RBP6.35□□□□□ -1.39
LRP6-207ENST00000545658 ZNF232Q9UNY5 417 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 KIAA1024Q9UPX6 916 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 EID1Q9Y6B2 187 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 DNMT3AQ9Y6K1 912 aaPredicted RBP6.35□□□□□ -1.39
LRP6-207ENST00000545658 UBR1Q8IWV7 1749 aa6.35□□□□□ -1.39
LRP6-207ENST00000545658 NKTRP30414 1462 aaKnown RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 MBD5Q9P267 1494 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 CCNB3Q8WWL7 1395 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 SHPRHQ149N8 1683 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 KHNYNO15037 678 aaKnown RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 ZBTB7BO15156 539 aaPredicted RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 MAPTP10636 758 aaKnown RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 CD33P20138 364 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 AMPD1P23109 780 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 SNRPNP63162 240 aaKnown RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 CLDN10P78369 228 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 CCDC102BQ68D86 513 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 PLEKHM2Q8IWE5 1019 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 L3MBTL2Q969R5 705 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
LRP6-207ENST00000545658 ABCC3O15438 1527 aa6.34□□□□□ -1.39
LRP6-207ENST00000545658 CASKIN1Q8WXD9 1431 aa6.33□□□□□ -1.4
LRP6-207ENST00000545658 AHDC1Q5TGY3 1603 aaPredicted RBP6.33□□□□□ -1.4
LRP6-207ENST00000545658 ZNF644Q9H582 1327 aaPredicted RBP6.33□□□□□ -1.4
LRP6-207ENST00000545658 ATP1A2P50993 1020 aa6.33□□□□□ -1.4
LRP6-207ENST00000545658 EPHA4P54764 986 aa6.33□□□□□ -1.4
LRP6-207ENST00000545658 FOXK2Q01167 660 aa6.33□□□□□ -1.4
LRP6-207ENST00000545658 TNP2Q05952 138 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms