RNA–Protein interactions for RNA: ENST00000543886.5

PTPRO-209, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

TSL 1 (best) BASIC

Gene PTPRO, Length 2,070 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-209ENST00000543886 ZNF609O15014 1411 aa20.54■□□□□ 0.88
PTPRO-209ENST00000543886 CYP2E1P05181 493 aaPredicted RBP20.54■□□□□ 0.88
PTPRO-209ENST00000543886 IL6STP40189 918 aaPredicted RBP20.54■□□□□ 0.88
PTPRO-209ENST00000543886 INTS4Q96HW7 963 aaKnown RBP20.54■□□□□ 0.88
PTPRO-209ENST00000543886 MED23Q9ULK4 1368 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 SLIT2O94813 1529 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 ZKSCAN1P17029 563 aaPredicted RBP20.53■□□□□ 0.88
PTPRO-209ENST00000543886 BARGINQ6ZT62 677 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 NLRP10Q86W26 655 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 FBXO3Q9UK99 471 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 RBM8AQ9Y5S9 174 aaKnown RBP20.53■□□□□ 0.88
PTPRO-209ENST00000543886 CDHR2Q9BYE9 1310 aa20.53■□□□□ 0.88
PTPRO-209ENST00000543886 CASTP20810 708 aaKnown RBP20.52■□□□□ 0.88
PTPRO-209ENST00000543886 TAF7LQ5H9L4 462 aa20.52■□□□□ 0.88
PTPRO-209ENST00000543886 MARCH10Q8NA82 808 aaPredicted RBP20.52■□□□□ 0.88
PTPRO-209ENST00000543886 KCNB2Q92953 911 aa20.52■□□□□ 0.88
PTPRO-209ENST00000543886 ACSBG1Q96GR2 724 aa20.52■□□□□ 0.88
PTPRO-209ENST00000543886 ERVV-1B6SEH8 477 aa20.52■□□□□ 0.87
PTPRO-209ENST00000543886 BAG4O95429 457 aaKnown RBP20.52■□□□□ 0.87
PTPRO-209ENST00000543886 NECTIN1Q15223 517 aa20.52■□□□□ 0.87
PTPRO-209ENST00000543886 DZIP3Q86Y13 1208 aaKnown RBP20.52■□□□□ 0.87
PTPRO-209ENST00000543886 MAP4K1Q92918 833 aa20.52■□□□□ 0.87
PTPRO-209ENST00000543886 CEP126Q9P2H0 1117 aa20.52■□□□□ 0.87
PTPRO-209ENST00000543886 NUP98P52948 1817 aa20.51■□□□□ 0.87
PTPRO-209ENST00000543886 IFIT5Q13325 482 aaKnown RBP20.51■□□□□ 0.87
PTPRO-209ENST00000543886 JAKMIP1Q96N16 626 aaKnown RBP20.51■□□□□ 0.87
PTPRO-209ENST00000543886 TTC14Q96N46 770 aa20.51■□□□□ 0.87
PTPRO-209ENST00000543886 TIMM10P62072 90 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 PKP1Q13835 747 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 SKOR2Q2VWA4 1001 aaPredicted RBP20.5■□□□□ 0.87
PTPRO-209ENST00000543886 RNF20Q5VTR2 975 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 PUS3Q9BZE2 481 aaKnown RBP20.5■□□□□ 0.87
PTPRO-209ENST00000543886 TM6SF1Q9BZW5 370 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 NDUFB9Q9Y6M9 179 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 A0A1B0GUL7 405 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 CSF1RP07333 972 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 CREB3L3Q68CJ9 461 aa20.5■□□□□ 0.87
PTPRO-209ENST00000543886 CCDC85AQ96PX6 553 aaPredicted RBP20.5■□□□□ 0.87
PTPRO-209ENST00000543886 AK2P54819 239 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 DDX46Q7L014 1031 aaKnown RBP20.49■□□□□ 0.87
PTPRO-209ENST00000543886 GZF1Q9H116 711 aaPredicted RBP20.49■□□□□ 0.87
PTPRO-209ENST00000543886 TBC1D2BQ9UPU7 963 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 AKAP2Q9Y2D5 859 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 CYP46A1Q9Y6A2 500 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 ATP6V1AP38606 617 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 CCDC87Q9NVE4 849 aa20.49■□□□□ 0.87
PTPRO-209ENST00000543886 TRMT112Q9UI30 125 aaKnown RBP20.49■□□□□ 0.87
PTPRO-209ENST00000543886 JCADQ9P266 1359 aa20.48■□□□□ 0.87
PTPRO-209ENST00000543886 ZNF589Q86UQ0 364 aaPredicted RBP20.48■□□□□ 0.87
PTPRO-209ENST00000543886 KBTBD3Q8NAB2 608 aa20.48■□□□□ 0.87
PTPRO-209ENST00000543886 PAG1Q9NWQ8 432 aa20.48■□□□□ 0.87
PTPRO-209ENST00000543886 LIMCH1Q9UPQ0 1083 aa20.48■□□□□ 0.87
PTPRO-209ENST00000543886 MYH3P11055 1940 aa20.48■□□□□ 0.87
PTPRO-209ENST00000543886 SLC27A2O14975 620 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 CTSWP56202 376 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 ADCK5Q3MIX3 580 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 VPS53Q5VIR6 699 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 ZSWIM6Q9HCJ5 1215 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 PDRG1Q9NUG6 133 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 PALLDQ8WX93 1383 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 LOC102724428A0A0B4J2F2 783 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 GOLIM4O00461 696 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 IRS4O14654 1257 aaPredicted RBP20.47■□□□□ 0.87
PTPRO-209ENST00000543886 SIK1P57059 783 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 SYNE4Q8N205 404 aa20.47■□□□□ 0.87
PTPRO-209ENST00000543886 UBAP1LF5GYI3 381 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 CPA1P15085 419 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 PSMA5P28066 241 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 CRKLP46109 303 aaKnown RBP20.46■□□□□ 0.87
PTPRO-209ENST00000543886 ZDHHC9Q9Y397 364 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 SPEF2Q9C093 1822 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 CICQ96RK0 1608 aaPredicted RBP20.46■□□□□ 0.87
PTPRO-209ENST00000543886 TAF5LO75529 589 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 IFIT1P09914 478 aaKnown RBP20.46■□□□□ 0.87
PTPRO-209ENST00000543886 EIF5P55010 431 aaKnown RBP20.46■□□□□ 0.87
PTPRO-209ENST00000543886 GORABQ5T7V8 394 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 INTS5Q6P9B9 1019 aaKnown RBP20.46■□□□□ 0.87
PTPRO-209ENST00000543886 RUFY3Q7L099 469 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 TICAM2Q86XR7 235 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 TTLL11Q8NHH1 800 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 HMG20BQ9P0W2 317 aa20.46■□□□□ 0.87
PTPRO-209ENST00000543886 ANKRD18BA2A2Z9 1011 aa20.45■□□□□ 0.86
PTPRO-209ENST00000543886 ITGA6P23229 1130 aa20.45■□□□□ 0.86
PTPRO-209ENST00000543886 MCMDC2Q4G0Z9 681 aa20.45■□□□□ 0.86
PTPRO-209ENST00000543886 MCTP1Q6DN14 999 aa20.45■□□□□ 0.86
PTPRO-209ENST00000543886 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.45■□□□□ 0.86
PTPRO-209ENST00000543886 RPAP1Q9BWH6 1393 aaPredicted RBP20.45■□□□□ 0.86
PTPRO-209ENST00000543886 RREB1Q92766 1687 aa20.45■□□□□ 0.86
PTPRO-209ENST00000543886 CCDC158Q5M9N0 1113 aa20.44■□□□□ 0.86
PTPRO-209ENST00000543886 ZNF34Q8IZ26 560 aa20.44■□□□□ 0.86
PTPRO-209ENST00000543886 SMARCC1Q92922 1105 aaPredicted RBP20.44■□□□□ 0.86
PTPRO-209ENST00000543886 GREM2Q9H772 168 aa20.44■□□□□ 0.86
PTPRO-209ENST00000543886 SH3TC1Q8TE82 1336 aa20.44■□□□□ 0.86
PTPRO-209ENST00000543886 PDE8AO60658 829 aa20.44■□□□□ 0.86
PTPRO-209ENST00000543886 UBN2Q6ZU65 1347 aa20.43■□□□□ 0.86
PTPRO-209ENST00000543886 TTC39AQ5SRH9 613 aa20.43■□□□□ 0.86
PTPRO-209ENST00000543886 C8orf37Q96NL8 207 aa20.43■□□□□ 0.86
PTPRO-209ENST00000543886 FAM98CQ17RN3 349 aaKnown RBP20.42■□□□□ 0.86
PTPRO-209ENST00000543886 METTL24Q5JXM2 366 aa20.42■□□□□ 0.86
PTPRO-209ENST00000543886 L1TD1Q5T7N2 865 aaKnown RBP20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms