RNA–Protein interactions for RNA: ENST00000543264.6

SHD-201, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHD, Length 2,577 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-201ENST00000543264 RESTQ13127 1097 aa27.91■■■□□ 2.06
SHD-201ENST00000543264 ZNF397Q8NF99 534 aaPredicted RBP27.91■■■□□ 2.06
SHD-201ENST00000543264 CHD2O14647 1828 aaKnown RBP27.91■■■□□ 2.06
SHD-201ENST00000543264 RBM6P78332 1123 aaKnown RBP27.9■■■□□ 2.06
SHD-201ENST00000543264 SARM1Q6SZW1 724 aa27.9■■■□□ 2.06
SHD-201ENST00000543264 MRFAP1L1Q96HT8 127 aa27.9■■■□□ 2.06
SHD-201ENST00000543264 TLR7Q9NYK1 1049 aaKnown RBP27.9■■■□□ 2.06
SHD-201ENST00000543264 MAP3K2Q9Y2U5 619 aa27.9■■■□□ 2.06
SHD-201ENST00000543264 NPHP4O75161 1426 aaPredicted RBP27.89■■■□□ 2.06
SHD-201ENST00000543264 ADGRL3Q9HAR2 1447 aa27.89■■■□□ 2.06
SHD-201ENST00000543264 A0A087WWV3 80 aa27.89■■■□□ 2.06
SHD-201ENST00000543264 BECN2A8MW95 431 aa27.89■■■□□ 2.06
SHD-201ENST00000543264 SASH1O94885 1247 aa27.89■■■□□ 2.06
SHD-201ENST00000543264 ZNF589Q86UQ0 364 aaPredicted RBP27.89■■■□□ 2.06
SHD-201ENST00000543264 KRT222Q8N1A0 295 aa27.89■■■□□ 2.06
SHD-201ENST00000543264 ALDH8A1Q9H2A2 487 aaPredicted RBP27.89■■■□□ 2.06
SHD-201ENST00000543264 ESF1Q9H501 851 aaKnown RBP27.89■■■□□ 2.06
SHD-201ENST00000543264 NEMFO60524 1076 aa27.89■■■□□ 2.05
SHD-201ENST00000543264 CWF19L2Q2TBE0 894 aaKnown RBP27.89■■■□□ 2.05
SHD-201ENST00000543264 CCDC69A6NI79 296 aa27.88■■■□□ 2.05
SHD-201ENST00000543264 G3BP1Q13283 466 aaKnown RBP eCLIP27.88■■■□□ 2.05
SHD-201ENST00000543264 TAF3Q5VWG9 929 aa27.88■■■□□ 2.05
SHD-201ENST00000543264 NYAP1Q6ZVC0 841 aa27.88■■■□□ 2.05
SHD-201ENST00000543264 CFAP45Q9UL16 551 aa27.88■■■□□ 2.05
SHD-201ENST00000543264 GIGYF1O75420 1035 aaPredicted RBP27.86■■■□□ 2.05
SHD-201ENST00000543264 HSP90B1P14625 803 aaKnown RBP27.86■■■□□ 2.05
SHD-201ENST00000543264 TERF2Q15554 542 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 ELF2Q15723 593 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 STX1AQ16623 288 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 GTF3C6Q969F1 213 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 NPHP1O15259 732 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 FOSBP53539 338 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 CCAR1Q8IX12 1150 aaKnown RBP27.86■■■□□ 2.05
SHD-201ENST00000543264 SLC26A8Q96RN1 970 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 SIL1Q9H173 461 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 SNRKQ9NRH2 765 aa27.86■■■□□ 2.05
SHD-201ENST00000543264 FBXO38Q6PIJ6 1188 aa27.85■■■□□ 2.05
SHD-201ENST00000543264 CCZ1BP86790 482 aa27.84■■■□□ 2.05
SHD-201ENST00000543264 CCZ1P86791 482 aaPredicted RBP27.84■■■□□ 2.05
SHD-201ENST00000543264 ZSCAN16Q9H4T2 348 aaPredicted RBP27.84■■■□□ 2.05
SHD-201ENST00000543264 HMG20BQ9P0W2 317 aa27.84■■■□□ 2.05
SHD-201ENST00000543264 HOXB7P09629 217 aa27.84■■■□□ 2.05
SHD-201ENST00000543264 FBXW7Q969H0 707 aa27.84■■■□□ 2.05
SHD-201ENST00000543264 FTOQ9C0B1 505 aaKnown RBP eCLIP27.84■■■□□ 2.05
SHD-201ENST00000543264 ADAMTS13Q76LX8 1427 aa27.84■■■□□ 2.05
SHD-201ENST00000543264 CCAR2Q8N163 923 aaKnown RBP27.83■■■□□ 2.05
SHD-201ENST00000543264 EDC3Q96F86 508 aaKnown RBP27.83■■■□□ 2.05
SHD-201ENST00000543264 ERO1AQ96HE7 468 aa27.83■■■□□ 2.05
SHD-201ENST00000543264 PTPRUQ92729 1446 aa27.83■■■□□ 2.05
SHD-201ENST00000543264 ALDH1L1O75891 902 aa27.83■■■□□ 2.05
SHD-201ENST00000543264 Q6ZUG5 572 aa27.83■■■□□ 2.05
SHD-201ENST00000543264 CHMP4AQ9BY43 222 aa27.83■■■□□ 2.05
SHD-201ENST00000543264 TAF5LO75529 589 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 NEK1Q96PY6 1258 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 NWD1Q149M9 1564 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 TMEM2Q9UHN6 1383 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 MED23Q9ULK4 1368 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 BTBD11A6QL63 1104 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 CTAGE5O15320 804 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 SUCLG2Q96I99 432 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 GOLPH3LQ9H4A5 285 aa27.82■■■□□ 2.04
SHD-201ENST00000543264 DBF4Q9UBU7 674 aaPredicted RBP27.82■■■□□ 2.04
SHD-201ENST00000543264 AGLP35573 1532 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 TSPOAP1O95153 1857 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 CEMIPQ8WUJ3 1361 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 PROSER3Q2NL68 480 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 TSGA10IPQ3SY00 556 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 DHX40Q8IX18 779 aaKnown RBP27.81■■■□□ 2.04
SHD-201ENST00000543264 ERCC4Q92889 916 aaPredicted RBP27.81■■■□□ 2.04
SHD-201ENST00000543264 LRRC2Q9BYS8 371 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 BICC1Q9H694 974 aaKnown RBP27.81■■■□□ 2.04
SHD-201ENST00000543264 TEFQ10587 303 aa27.81■■■□□ 2.04
SHD-201ENST00000543264 SLU7O95391 586 aaKnown RBP27.8■■■□□ 2.04
SHD-201ENST00000543264 KSR2Q6VAB6 950 aa27.8■■■□□ 2.04
SHD-201ENST00000543264 CCDC73Q6ZRK6 1079 aa27.8■■■□□ 2.04
SHD-201ENST00000543264 HDAC5Q9UQL6 1122 aa27.8■■■□□ 2.04
SHD-201ENST00000543264 KLHDC4Q8TBB5 520 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 KINO60870 393 aaKnown RBP27.79■■■□□ 2.04
SHD-201ENST00000543264 LTKP29376 864 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 ADD1P35611 737 aaKnown RBP27.79■■■□□ 2.04
SHD-201ENST00000543264 KRT32Q14532 448 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 AOPEPQ8N6M6 819 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 KAZALD1Q96I82 304 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 ANO10Q9NW15 660 aa27.79■■■□□ 2.04
SHD-201ENST00000543264 FGD1P98174 961 aa27.78■■■□□ 2.04
SHD-201ENST00000543264 RCOR1Q9UKL0 485 aa27.78■■■□□ 2.04
SHD-201ENST00000543264 SNW1Q13573 536 aaKnown RBP27.78■■■□□ 2.04
SHD-201ENST00000543264 SCRN1Q12765 414 aa27.77■■■□□ 2.04
SHD-201ENST00000543264 ABTB2Q8N961 1025 aa27.77■■■□□ 2.04
SHD-201ENST00000543264 ST7Q9NRC1 585 aa27.77■■■□□ 2.04
SHD-201ENST00000543264 GRM8O00222 908 aa27.77■■■□□ 2.04
SHD-201ENST00000543264 SYTL4Q96C24 671 aaPredicted RBP27.77■■■□□ 2.04
SHD-201ENST00000543264 MPRIPQ6WCQ1 1025 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 C14orf37Q86TY3 774 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 FAM53CQ9NYF3 392 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 AMOTL2Q9Y2J4 779 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 PIK3C2AO00443 1686 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 DIP2BQ9P265 1576 aa27.76■■■□□ 2.03
SHD-201ENST00000543264 USPL1Q5W0Q7 1092 aa27.75■■■□□ 2.03
SHD-201ENST00000543264 CCDC129Q6ZRS4 1044 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms