RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CALR3Q96L12 384 aaKnown RBP13.28□□□□□ -0.28
CDH4-201ENST00000543233 CSB-PGBD3P0DP91 1061 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 BIRC2Q13490 618 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 PROSER3Q2NL68 480 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 UVSSAQ2YD98 709 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 KRT28Q7Z3Y7 464 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 EIF4A1P60842 406 aaKnown RBP13.28□□□□□ -0.28
CDH4-201ENST00000543233 TPM4P67936 248 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 ST5P78524 1137 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 CHRNA2Q15822 529 aa13.28□□□□□ -0.28
CDH4-201ENST00000543233 PLEKHO1Q53GL0 409 aaPredicted RBP13.28□□□□□ -0.28
CDH4-201ENST00000543233 MAP2K2P36507 400 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 ATP8B2P98198 1209 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 SRLQ86TD4 932 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 PACS2Q86VP3 889 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 ANKRD20A12PQ8NF67 263 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 KIF24Q5T7B8 1368 aa13.27□□□□□ -0.28
CDH4-201ENST00000543233 DTNBO60941 627 aa13.27□□□□□ -0.29
CDH4-201ENST00000543233 MUM1L1Q5H9M0 696 aa13.27□□□□□ -0.29
CDH4-201ENST00000543233 KCNH5Q8NCM2 988 aa13.27□□□□□ -0.29
CDH4-201ENST00000543233 PAXBP1Q9Y5B6 917 aa13.27□□□□□ -0.29
CDH4-201ENST00000543233 ERC2O15083 957 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 TPM3P06753 285 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 CWF19L2Q2TBE0 894 aaKnown RBP13.26□□□□□ -0.29
CDH4-201ENST00000543233 MNS1Q8NEH6 495 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 SMARCE1Q969G3 411 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 SH3BP1Q9Y3L3 701 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 KDM4AO75164 1064 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 ATP6V1AP38606 617 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 NEK4P51957 841 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 LRMPQ12912 555 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 KIF1BPQ96EK5 621 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 UPF3BQ9BZI7 483 aaKnown RBP13.26□□□□□ -0.29
CDH4-201ENST00000543233 MYL6BP14649 208 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 LMAN1P49257 510 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 NBPF20Q3BBV1 942 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 CEP135Q66GS9 1140 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 RPAINQ86UA6 219 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 DNAAF4Q8WXU2 420 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 ANKARQ7Z5J8 1434 aa13.26□□□□□ -0.29
CDH4-201ENST00000543233 RABEP1Q15276 862 aa13.25□□□□□ -0.29
CDH4-201ENST00000543233 C9orf78Q9NZ63 289 aaPredicted RBP13.25□□□□□ -0.29
CDH4-201ENST00000543233 LARP6Q9BRS8 491 aaKnown RBP13.25□□□□□ -0.29
CDH4-201ENST00000543233 PA2G4Q9UQ80 394 aaKnown RBP13.25□□□□□ -0.29
CDH4-201ENST00000543233 ANKRD65E5RJM6 399 aa13.24□□□□□ -0.29
CDH4-201ENST00000543233 KIF1CO43896 1103 aaKnown RBP13.24□□□□□ -0.29
CDH4-201ENST00000543233 PALD1Q9ULE6 856 aa13.24□□□□□ -0.29
CDH4-201ENST00000543233 MAP3K2Q9Y2U5 619 aa13.24□□□□□ -0.29
CDH4-201ENST00000543233 CYP2E1P05181 493 aaPredicted RBP13.24□□□□□ -0.29
CDH4-201ENST00000543233 ARHGEF25Q86VW2 580 aa13.24□□□□□ -0.29
CDH4-201ENST00000543233 RNMTO43148 476 aaKnown RBP13.23□□□□□ -0.29
CDH4-201ENST00000543233 AKAP4Q5JQC9 854 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 CCDC186Q7Z3E2 898 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 RGPD1P0DJD0 1748 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 ST18O60284 1047 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 GADD45BO75293 160 aaPredicted RBP13.23□□□□□ -0.29
CDH4-201ENST00000543233 SIL1Q9H173 461 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 IL25Q9H293 177 aa13.23□□□□□ -0.29
CDH4-201ENST00000543233 CWC22Q9HCG8 908 aaKnown RBP13.23□□□□□ -0.29
CDH4-201ENST00000543233 SOS1Q07889 1333 aaPredicted RBP13.23□□□□□ -0.29
CDH4-201ENST00000543233 ZCCHC17Q9NP64 241 aaKnown RBP13.22□□□□□ -0.29
CDH4-201ENST00000543233 ZDHHC9Q9Y397 364 aa13.22□□□□□ -0.29
CDH4-201ENST00000543233 AK7Q96M32 723 aa13.22□□□□□ -0.29
CDH4-201ENST00000543233 RHPN1Q8TCX5 695 aa13.22□□□□□ -0.29
CDH4-201ENST00000543233 DDX54Q8TDD1 881 aaKnown RBP13.22□□□□□ -0.29
CDH4-201ENST00000543233 RAPGEF4Q8WZA2 1011 aa13.22□□□□□ -0.29
CDH4-201ENST00000543233 ATF3P18847 181 aa13.21□□□□□ -0.29
CDH4-201ENST00000543233 LEKR1Q6ZMV7 388 aa13.21□□□□□ -0.29
CDH4-201ENST00000543233 ESYT1Q9BSJ8 1104 aa13.21□□□□□ -0.29
CDH4-201ENST00000543233 PNMA6AP0CW24 399 aaPredicted RBP13.21□□□□□ -0.3
CDH4-201ENST00000543233 TSGA10IPQ3SY00 556 aa13.21□□□□□ -0.3
CDH4-201ENST00000543233 BEND3Q5T5X7 828 aa13.21□□□□□ -0.3
CDH4-201ENST00000543233 MCTP2Q6DN12 878 aa13.21□□□□□ -0.3
CDH4-201ENST00000543233 MED4Q9NPJ6 270 aa13.21□□□□□ -0.3
CDH4-201ENST00000543233 FMN2Q9NZ56 1722 aa13.21□□□□□ -0.3
CDH4-201ENST00000543233 CHMLP26374 656 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 MNAT1P51948 309 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 KLHDC4Q8TBB5 520 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 ERO1AQ96HE7 468 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 NWD1Q149M9 1564 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 MPHOSPH10O00566 681 aaKnown RBP13.2□□□□□ -0.3
CDH4-201ENST00000543233 ERCC6LQ2NKX8 1250 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 CWC27Q6UX04 472 aaKnown RBP13.2□□□□□ -0.3
CDH4-201ENST00000543233 ADGRL3Q9HAR2 1447 aa13.2□□□□□ -0.3
CDH4-201ENST00000543233 CALRP27797 417 aaKnown RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 MAGEA9P43362 315 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 PLA2G4AP47712 749 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 RAI14Q9P0K7 980 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 DBF4Q9UBU7 674 aaPredicted RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 SPG7Q9UQ90 795 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 PXDNQ92626 1479 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 GIGYF1O75420 1035 aaPredicted RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 OAS2P29728 719 aaKnown RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 TMCO3Q6UWJ1 677 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 CCDC34Q96HJ3 373 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 ATG3Q9NT62 314 aa13.19□□□□□ -0.3
CDH4-201ENST00000543233 NPHP4O75161 1426 aaPredicted RBP13.19□□□□□ -0.3
CDH4-201ENST00000543233 SSR1P43307 286 aaKnown RBP13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms