RNA–Protein interactions for RNA: ENST00000542841.1

SRGAP1-205, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 836 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-205ENST00000542841 TRPM7Q96QT4 1865 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 RIC1Q4ADV7 1423 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 MAP3K15Q6ZN16 1313 aa14.9□□□□□ -0.02
SRGAP1-205ENST00000542841 IBTKQ9P2D0 1353 aaPredicted RBP14.89□□□□□ -0.03
SRGAP1-205ENST00000542841 BRPF1P55201 1214 aaPredicted RBP14.89□□□□□ -0.03
SRGAP1-205ENST00000542841 NEUROD2Q15784 382 aa14.89□□□□□ -0.03
SRGAP1-205ENST00000542841 AOC3Q16853 763 aa14.89□□□□□ -0.03
SRGAP1-205ENST00000542841 CDCA7LQ96GN5 454 aa14.89□□□□□ -0.03
SRGAP1-205ENST00000542841 GPTP24298 496 aa14.88□□□□□ -0.03
SRGAP1-205ENST00000542841 SUSD4Q5VX71 490 aa14.87□□□□□ -0.03
SRGAP1-205ENST00000542841 SUPT20HQ8NEM7 779 aa14.87□□□□□ -0.03
SRGAP1-205ENST00000542841 MIS18AQ9NYP9 233 aa14.87□□□□□ -0.03
SRGAP1-205ENST00000542841 ZNRF3Q9ULT6 936 aa14.87□□□□□ -0.03
SRGAP1-205ENST00000542841 UBN2Q6ZU65 1347 aa14.87□□□□□ -0.03
SRGAP1-205ENST00000542841 NEFLP07196 543 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 CT47B1P0C2W7 299 aaPredicted RBP14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 CXCL9Q07325 125 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 DGKZQ13574 1117 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 TTLL7Q6ZT98 887 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 PPP1R42Q7Z4L9 355 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 SLC51AQ86UW1 340 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 NLRP3Q96P20 1036 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 GLIS2Q9BZE0 524 aaPredicted RBP14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 ZBTB3Q9H5J0 574 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 ZNF408Q9H9D4 720 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 ATP6V0A2Q9Y487 856 aa14.86□□□□□ -0.03
SRGAP1-205ENST00000542841 LAMB4A4D0S4 1761 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 MYL6BP14649 208 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 GMPSP49915 693 aaPredicted RBP14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 CIAPIN1Q6FI81 312 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 ZNF34Q8IZ26 560 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 ZC3H15Q8WU90 426 aaKnown RBP14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 BCL2L13Q9BXK5 485 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 PGAP2Q9UHJ9 254 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 CDHR2Q9BYE9 1310 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 NUP98P52948 1817 aa14.85□□□□□ -0.03
SRGAP1-205ENST00000542841 NTSR2O95665 410 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 NOGQ13253 232 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 TNIP1Q15025 636 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 GIGYF2Q6Y7W6 1299 aaKnown RBP14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 C3orf67Q6ZVT6 689 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 CDC37L1Q7L3B6 337 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 RCAN3Q9UKA8 241 aa14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 SUPT16HQ9Y5B9 1047 aaKnown RBP14.84□□□□□ -0.03
SRGAP1-205ENST00000542841 GNAI1P63096 354 aa14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 PARP10Q53GL7 1025 aa14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 DPP8Q6V1X1 898 aaPredicted RBP14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 RTFDC1Q9BY42 306 aaPredicted RBP14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 SPINK5Q9NQ38 1064 aaPredicted RBP14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 IFT57Q9NWB7 429 aa14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 GTF3C3Q9Y5Q9 886 aa14.83□□□□□ -0.04
SRGAP1-205ENST00000542841 BBOX1O75936 387 aa14.82□□□□□ -0.04
SRGAP1-205ENST00000542841 HIRAP54198 1017 aaPredicted RBP14.82□□□□□ -0.04
SRGAP1-205ENST00000542841 EIF4A1P60842 406 aaKnown RBP14.82□□□□□ -0.04
SRGAP1-205ENST00000542841 ERICH6BQ5W0A0 696 aa14.82□□□□□ -0.04
SRGAP1-205ENST00000542841 CASP8AP2Q9UKL3 1982 aa14.82□□□□□ -0.04
SRGAP1-205ENST00000542841 RAD17O75943 681 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 HUNKP57058 714 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 KIAA2012Q0VF49 1180 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 SLC10A5Q5PT55 438 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 SP8Q8IXZ3 490 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 MPNDQ8N594 471 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 UTP14AQ9BVJ6 771 aaKnown RBP14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 CNOT7Q9UIV1 285 aaKnown RBP14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 ABCC4O15439 1325 aa14.81□□□□□ -0.04
SRGAP1-205ENST00000542841 H7C1D1 291 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 ZNF853P0CG23 659 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 TRPM4Q8TD43 1214 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 BABAM1Q9NWV8 329 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 ERBB4Q15303 1308 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 FANCIQ9NVI1 1328 aa14.8□□□□□ -0.04
SRGAP1-205ENST00000542841 USP48Q86UV5 1035 aa14.79□□□□□ -0.04
SRGAP1-205ENST00000542841 ZNF428Q96B54 188 aa14.79□□□□□ -0.04
SRGAP1-205ENST00000542841 RGMBQ6NW40 437 aa14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 MICALL2Q8IY33 904 aa14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 ZIC5Q96T25 663 aa14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 SAGE1Q9NXZ1 904 aa14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 KDM3BQ7LBC6 1761 aa14.78□□□□□ -0.04
SRGAP1-205ENST00000542841 DDX46Q7L014 1031 aaKnown RBP14.77□□□□□ -0.05
SRGAP1-205ENST00000542841 SHTN1A0MZ66 631 aa14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 YDJCA8MPS7 323 aa14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 RRP1P56182 461 aaKnown RBP14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 C2orf69Q8N8R5 385 aa14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 DPF2Q92785 391 aa14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 CCDC102AQ96A19 550 aa14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 GBA2Q9HCG7 927 aaPredicted RBP14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 TNRC18O15417 2968 aaPredicted RBP14.76□□□□□ -0.05
SRGAP1-205ENST00000542841 FAM155AB1AL88 458 aaPredicted RBP14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 CHL1O00533 1208 aa14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 HCLS1P14317 486 aaPredicted RBP14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 GRAPQ13588 217 aa14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 HSP90AB3PQ58FF7 597 aa14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 KRT26Q7Z3Y9 468 aa14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 TMC4Q7Z404 712 aa14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 GRAPLQ8TC17 118 aaPredicted RBP14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 THUMPD2Q9BTF0 503 aaKnown RBP14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 ZBTB12Q9Y330 459 aaPredicted RBP14.75□□□□□ -0.05
SRGAP1-205ENST00000542841 TRPA1O75762 1119 aa14.74□□□□□ -0.05
SRGAP1-205ENST00000542841 EIF2S2P20042 333 aaKnown RBP14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms