RNA–Protein interactions for RNA: ENST00000542068.5

CNOT9-208, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CNOT9, Length 3,259 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-208ENST00000542068 ZNF790Q6PG37 636 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 BLOC1S2Q6QNY1 142 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 DNAJC25Q9H1X3 360 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 STRN4Q9NRL3 753 aa18.16■□□□□ 0.5
CNOT9-208ENST00000542068 ZSWIM6Q9HCJ5 1215 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 CABP4P57796 275 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 MRVI1Q9Y6F6 885 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 SLC27A2O14975 620 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 LINS1Q8NG48 757 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 ZSCAN31Q96LW9 406 aaPredicted RBP18.15■□□□□ 0.5
CNOT9-208ENST00000542068 CBX8Q9HC52 389 aa18.15■□□□□ 0.5
CNOT9-208ENST00000542068 KIF13AQ9H1H9 1805 aa18.14■□□□□ 0.5
CNOT9-208ENST00000542068 HSPA2P54652 639 aa18.14■□□□□ 0.49
CNOT9-208ENST00000542068 FAM200AQ8TCP9 573 aa18.14■□□□□ 0.49
CNOT9-208ENST00000542068 SH2B1Q9NRF2 756 aaPredicted RBP18.14■□□□□ 0.49
CNOT9-208ENST00000542068 A0A087WZG4 1122 aa18.14■□□□□ 0.49
CNOT9-208ENST00000542068 ERCC4Q92889 916 aaPredicted RBP18.14■□□□□ 0.49
CNOT9-208ENST00000542068 NR1I2O75469 434 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 CCDC129Q6ZRS4 1044 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 ANKRD13DQ6ZTN6 518 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 ZNF589Q86UQ0 364 aaPredicted RBP18.13■□□□□ 0.49
CNOT9-208ENST00000542068 H3BQV1 296 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 NECTIN1Q15223 517 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 EPHA10Q5JZY3 1008 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 IFFO2Q5TF58 517 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 DDX46Q7L014 1031 aaKnown RBP18.13■□□□□ 0.49
CNOT9-208ENST00000542068 EVI5LQ96CN4 794 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 ZBTB3Q9H5J0 574 aa18.13■□□□□ 0.49
CNOT9-208ENST00000542068 DDX21Q9NR30 783 aaKnown RBP eCLIP18.13■□□□□ 0.49
CNOT9-208ENST00000542068 SASH1O94885 1247 aa18.12■□□□□ 0.49
CNOT9-208ENST00000542068 ERC1Q8IUD2 1116 aa18.12■□□□□ 0.49
CNOT9-208ENST00000542068 SPTLC3Q9NUV7 552 aa18.12■□□□□ 0.49
CNOT9-208ENST00000542068 BABAM1Q9NWV8 329 aa18.12■□□□□ 0.49
CNOT9-208ENST00000542068 NOL12Q9UGY1 213 aaKnown RBP eCLIP18.12■□□□□ 0.49
CNOT9-208ENST00000542068 V9GYY5 206 aaPredicted RBP18.12■□□□□ 0.49
CNOT9-208ENST00000542068 GUCY1B3Q02153 619 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 SMAP1Q8IYB5 467 aaPredicted RBP18.11■□□□□ 0.49
CNOT9-208ENST00000542068 FTOQ9C0B1 505 aaKnown RBP eCLIP18.11■□□□□ 0.49
CNOT9-208ENST00000542068 NPHP1O15259 732 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 ARID5BQ14865 1188 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 TOM1L2Q6ZVM7 507 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 HDAC5Q9UQL6 1122 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 TTC41PQ6P2S7 1318 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 SLFNL1Q499Z3 407 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 PIK3C2AO00443 1686 aa18.11■□□□□ 0.49
CNOT9-208ENST00000542068 IGKV5-2P06315 115 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 ZNF165P49910 485 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 TPD52L1Q16890 204 aaPredicted RBP18.1■□□□□ 0.49
CNOT9-208ENST00000542068 ALDH1L1O75891 902 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 ANKARQ7Z5J8 1434 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 PSMA5P28066 241 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 FILIP1Q7Z7B0 1213 aa18.1■□□□□ 0.49
CNOT9-208ENST00000542068 LEO1Q8WVC0 666 aaPredicted RBP18.1■□□□□ 0.49
CNOT9-208ENST00000542068 SEC62Q99442 399 aaKnown RBP18.1■□□□□ 0.49
CNOT9-208ENST00000542068 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 PXDNQ92626 1479 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 TNNT1P13805 278 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 TFCP2Q12800 502 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 BRF1Q92994 677 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 PRDM11Q9NQV5 511 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 TRMT1Q9NXH9 659 aaKnown RBP18.09■□□□□ 0.49
CNOT9-208ENST00000542068 CLIP2Q9UDT6 1046 aa18.09■□□□□ 0.49
CNOT9-208ENST00000542068 HOXB7P09629 217 aa18.08■□□□□ 0.49
CNOT9-208ENST00000542068 IFNL2Q8IZJ0 200 aa18.08■□□□□ 0.49
CNOT9-208ENST00000542068 ERBB3P21860 1342 aa18.08■□□□□ 0.49
CNOT9-208ENST00000542068 RNF20Q5VTR2 975 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 C19orf44Q9H6X5 657 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 SLC52A2Q9HAB3 445 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 LMBR1LQ6UX01 489 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 MAP4K1Q92918 833 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 IL17RAQ96F46 866 aa18.08■□□□□ 0.48
CNOT9-208ENST00000542068 PDCP20941 246 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 SYTL4Q96C24 671 aaPredicted RBP18.07■□□□□ 0.48
CNOT9-208ENST00000542068 KAZALD1Q96I82 304 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 NEURL1BA8MQ27 555 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 ZSCAN20P17040 1043 aaPredicted RBP18.07■□□□□ 0.48
CNOT9-208ENST00000542068 CCT2P78371 535 aaKnown RBP18.07■□□□□ 0.48
CNOT9-208ENST00000542068 GCKRQ14397 625 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 GORABQ5T7V8 394 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 NPHP3Q7Z494 1330 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 PGBD1Q96JS3 809 aa18.07■□□□□ 0.48
CNOT9-208ENST00000542068 GOLGA6L19H0YKK7 550 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 RPS6KB1P23443 525 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 TIMM10P62072 90 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 TOB2Q14106 344 aaPredicted RBP18.06■□□□□ 0.48
CNOT9-208ENST00000542068 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 CCDC144BQ3MJ40 725 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 CHST3Q7LGC8 479 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 SNRKQ9NRH2 765 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 A1BGP04217 495 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 SNRPA1P09661 255 aaKnown RBP18.06■□□□□ 0.48
CNOT9-208ENST00000542068 ZNF75DP51815 510 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 CACTINQ8WUQ7 758 aaKnown RBP18.06■□□□□ 0.48
CNOT9-208ENST00000542068 ZNF594Q96JF6 807 aaPredicted RBP18.06■□□□□ 0.48
CNOT9-208ENST00000542068 TM6SF1Q9BZW5 370 aa18.06■□□□□ 0.48
CNOT9-208ENST00000542068 ARHGAP23Q9P227 1491 aa18.05■□□□□ 0.48
CNOT9-208ENST00000542068 EPB41L2O43491 1005 aaKnown RBP18.05■□□□□ 0.48
CNOT9-208ENST00000542068 PHKG2P15735 406 aa18.05■□□□□ 0.48
CNOT9-208ENST00000542068 Q6ZUG5 572 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms