RNA–Protein interactions for RNA: ENST00000541864.6

SLC12A4-204, Transcript of solute carrier family 12 member 4, humanhuman

TSL 2 BASIC

Gene SLC12A4, Length 3,627 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-204ENST00000541864 METTL22Q9BUU2 404 aaPredicted RBP13.74□□□□□ -0.21
SLC12A4-204ENST00000541864 CCDC171Q6TFL3 1326 aa13.74□□□□□ -0.21
SLC12A4-204ENST00000541864 A0A0D9SFI3 127 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 ZSCAN22P10073 491 aaPredicted RBP13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 ATP2B1P20020 1258 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 ZNF592Q92610 1267 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 CACNA1FO60840 1977 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 TFCP2Q12800 502 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 HIP1O00291 1037 aa13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 BRD2P25440 801 aaKnown RBP13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 ZNF594Q96JF6 807 aaPredicted RBP13.73□□□□□ -0.21
SLC12A4-204ENST00000541864 PSMA5P28066 241 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 CPLX1O14810 134 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 CYP27B1O15528 508 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 TTC14Q96N46 770 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 SLFNL1Q499Z3 407 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 ZSCAN30Q86W11 494 aa13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 SEC62Q99442 399 aaKnown RBP13.72□□□□□ -0.21
SLC12A4-204ENST00000541864 A1BGP04217 495 aa13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 DCAF5Q96JK2 942 aa13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 MARF1Q9Y4F3 1742 aaKnown RBP13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 NCAPD2Q15021 1401 aa13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 CHD2O14647 1828 aaKnown RBP13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 C1orf167Q5SNV9 1468 aa13.71□□□□□ -0.21
SLC12A4-204ENST00000541864 TMEM94Q12767 1356 aa13.71□□□□□ -0.22
SLC12A4-204ENST00000541864 CHGBP05060 677 aa13.71□□□□□ -0.22
SLC12A4-204ENST00000541864 CSPP1Q1MSJ5 1256 aa13.71□□□□□ -0.22
SLC12A4-204ENST00000541864 SLC27A2O14975 620 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 F13A1P00488 732 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 GTF2E1P29083 439 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 ME3Q16798 604 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 RRP12Q5JTH9 1297 aaKnown RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 CCDC82Q8N4S0 544 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 BRF1Q92994 677 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 PPP1R9BQ96SB3 815 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 BECN2A8MW95 431 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 EPB41L2O43491 1005 aaKnown RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 VPS53Q5VIR6 699 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 CREBRFQ8IUR6 639 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 ZSCAN31Q96LW9 406 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 DBNDD2Q9BQY9 259 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 CCDC57Q2TAC2 916 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 ZNF589Q86UQ0 364 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 C17orf53Q8N3J3 647 aaPredicted RBP13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 SPATA32Q96LK8 384 aa13.7□□□□□ -0.22
SLC12A4-204ENST00000541864 PAXIP1Q6ZW49 1069 aaPredicted RBP13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 TRIM5Q9C035 493 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 TTC12Q9H892 705 aaPredicted RBP13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 USP42Q9H9J4 1324 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 KRT85P78386 507 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 ZSWIM6Q9HCJ5 1215 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 CNNM1Q9NRU3 951 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 CEP126Q9P2H0 1117 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 TPCN1Q9ULQ1 816 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 IDH1O75874 414 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 NECTIN1Q15223 517 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 DBNLQ9UJU6 430 aaKnown RBP13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 MTMR7Q9Y216 660 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 TAF6LQ9Y6J9 622 aa13.69□□□□□ -0.22
SLC12A4-204ENST00000541864 COL9A3Q14050 684 aaPredicted RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 TNNI3KQ59H18 835 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 SH2B1Q9NRF2 756 aaPredicted RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 FPGT-TNNI3KV9GXZ4 949 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 GOLGA6L19H0YKK7 550 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 CDK11BP21127 795 aaKnown RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 TTC39AQ5SRH9 613 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 SASS6Q6UVJ0 657 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 CADPS2Q86UW7 1296 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 BBXQ8WY36 941 aaPredicted RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 RPAP1Q9BWH6 1393 aaPredicted RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 IFIT1P09914 478 aaKnown RBP13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 NFXL1Q6ZNB6 911 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 TTLL7Q6ZT98 887 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 CCDC144CPQ8IYA2 1237 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 MAP4K1Q92918 833 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 SDF4Q9BRK5 362 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 TNMDQ9H2S6 317 aa13.68□□□□□ -0.22
SLC12A4-204ENST00000541864 ME1P48163 572 aa13.67□□□□□ -0.22
SLC12A4-204ENST00000541864 CHAF1AQ13111 956 aaPredicted RBP13.67□□□□□ -0.22
SLC12A4-204ENST00000541864 RALYLQ86SE5 291 aaKnown RBP13.67□□□□□ -0.22
SLC12A4-204ENST00000541864 PTPN12Q05209 780 aaKnown RBP13.67□□□□□ -0.22
SLC12A4-204ENST00000541864 HELBQ8NG08 1087 aaPredicted RBP13.67□□□□□ -0.22
SLC12A4-204ENST00000541864 NUTM2BA6NNL0 878 aaPredicted RBP13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 NUTM2EB1AL46 878 aaPredicted RBP13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 NUTM2AQ8IVF1 878 aaPredicted RBP13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 CCDC39Q9UFE4 941 aa13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 KDM6AO15550 1401 aaPredicted RBP13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 HEG1Q9ULI3 1381 aa13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 CCDC183Q5T5S1 534 aa13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 ZCRB1Q8TBF4 217 aaKnown RBP13.66□□□□□ -0.22
SLC12A4-204ENST00000541864 UBE2HP62256 183 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 ISM2Q6H9L7 571 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 FAM89AQ96GI7 184 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 IQSEC3Q9UPP2 1182 aaPredicted RBP13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 MTMR6Q9Y217 621 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 MEGF6O75095 1541 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 ADCY5O95622 1261 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 JAK2O60674 1132 aa13.65□□□□□ -0.22
SLC12A4-204ENST00000541864 ADAMTS2O95450 1211 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms