RNA–Protein interactions for RNA: ENST00000540574.5

PHC1-208, Transcript of polyhomeotic homolog 1, humanhuman

TSL 1 (best)

Gene PHC1, Length 3,869 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-208ENST00000540574 STK38Q15208 465 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 OTUD7BQ6GQQ9 843 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 TPCN1Q9ULQ1 816 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 OVOS2A0A0J9YW53 1432 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 OVOS2Q6IE36 1432 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 INTS4Q96HW7 963 aaKnown RBP11.67□□□□□ -0.54
PHC1-208ENST00000540574 STAP2Q9UGK3 403 aa11.67□□□□□ -0.54
PHC1-208ENST00000540574 SLC4A8Q2Y0W8 1093 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 TNNI3KQ59H18 835 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 VPS37DQ86XT2 251 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 METTL22Q9BUU2 404 aaPredicted RBP11.66□□□□□ -0.54
PHC1-208ENST00000540574 ABCF2Q9UG63 623 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 TRMT112Q9UI30 125 aaKnown RBP11.66□□□□□ -0.54
PHC1-208ENST00000540574 FPGT-TNNI3KV9GXZ4 949 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 NPHP3Q7Z494 1330 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 CEP170BQ9Y4F5 1589 aaPredicted RBP11.66□□□□□ -0.54
PHC1-208ENST00000540574 IFIT5Q13325 482 aaKnown RBP11.66□□□□□ -0.54
PHC1-208ENST00000540574 ADGRB2O60241 1585 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 A0A087WWV3 80 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 ACSBG1Q96GR2 724 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 IFT172Q9UG01 1749 aa11.66□□□□□ -0.54
PHC1-208ENST00000540574 IGKV5-2P06315 115 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 PHKG2P15735 406 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 LUZP1Q86V48 1076 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 TSC1Q92574 1164 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 DBNLQ9UJU6 430 aaKnown RBP11.65□□□□□ -0.54
PHC1-208ENST00000540574 CDC42BPGQ6DT37 1551 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 ZNF445P59923 1031 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 KRT32Q14532 448 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 MCMDC2Q4G0Z9 681 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 TTLL5Q6EMB2 1281 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 CADPS2Q86UW7 1296 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 PAG1Q9NWQ8 432 aa11.65□□□□□ -0.54
PHC1-208ENST00000540574 VPS53Q5VIR6 699 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 DCAF5Q96JK2 942 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 MPHOSPH8Q99549 860 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
PHC1-208ENST00000540574 HSP90AA4PQ58FG1 418 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 CPLX2Q6PUV4 134 aaKnown RBP11.64□□□□□ -0.55
PHC1-208ENST00000540574 DNAJC25Q9H1X3 360 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 TAF6LQ9Y6J9 622 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 SMC2O95347 1197 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 TRIM29Q14134 588 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 LRRFIP1Q32MZ4 808 aaKnown RBP11.64□□□□□ -0.55
PHC1-208ENST00000540574 MICU3Q86XE3 530 aa11.64□□□□□ -0.55
PHC1-208ENST00000540574 A0A1B0GUL7 405 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 ANO6Q4KMQ2 910 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.63□□□□□ -0.55
PHC1-208ENST00000540574 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.63□□□□□ -0.55
PHC1-208ENST00000540574 U3KPZ7 1027 aaPredicted RBP11.63□□□□□ -0.55
PHC1-208ENST00000540574 ERBB3P21860 1342 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 GOLGA8BA8MQT2 603 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 LETM1O95202 739 aaPredicted RBP11.63□□□□□ -0.55
PHC1-208ENST00000540574 HOXB7P09629 217 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 USP31Q70CQ4 1352 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 POLA2Q14181 598 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 NEURL4Q96JN8 1562 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 RIMBP3CA6NJZ7 1639 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 RIMBP3BA6NNM3 1639 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 RIMBP3Q9UFD9 1639 aa11.63□□□□□ -0.55
PHC1-208ENST00000540574 LIG1P18858 919 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 ZNF165P49910 485 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 TPD52L1Q16890 204 aaPredicted RBP11.62□□□□□ -0.55
PHC1-208ENST00000540574 IMMTQ16891 758 aaKnown RBP11.62□□□□□ -0.55
PHC1-208ENST00000540574 PI16Q6UXB8 463 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 SCAND2PQ9GZW5 306 aaPredicted RBP11.62□□□□□ -0.55
PHC1-208ENST00000540574 ZKSCAN5Q9Y2L8 839 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 ADCY9O60503 1353 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 C16orf45Q96MC5 204 aaPredicted RBP11.62□□□□□ -0.55
PHC1-208ENST00000540574 BABAM1Q9NWV8 329 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 RICTORQ6R327 1708 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 MINDY4BA8MYZ0 360 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 PES1O00541 588 aaKnown RBP11.62□□□□□ -0.55
PHC1-208ENST00000540574 CYP27B1O15528 508 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 RPS6KB1P23443 525 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 DDIT3P35638 169 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 DNAJC10Q8IXB1 793 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 RASSF8Q8NHQ8 419 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 FTOQ9C0B1 505 aaKnown RBP eCLIP11.62□□□□□ -0.55
PHC1-208ENST00000540574 MTMR6Q9Y217 621 aa11.62□□□□□ -0.55
PHC1-208ENST00000540574 KLF18A0A0U1RQI7 1052 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 ZNF213O14771 459 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 NRDCO43847 1150 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 STARD3NLO95772 234 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 CUL4AQ13619 759 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 SYNE4Q8N205 404 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 FSIP1Q8NA03 581 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 TRMT1Q9NXH9 659 aaKnown RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 PIP4K2BP78356 416 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 FAM177A1Q8N128 213 aaPredicted RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 AIDAQ96BJ3 306 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 CFAP45Q9UL16 551 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 RGS12O14924 1447 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 KDRP35968 1356 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 AKAP17AQ02040 695 aaKnown RBP11.61□□□□□ -0.55
PHC1-208ENST00000540574 TTC6Q86TZ1 520 aa11.61□□□□□ -0.55
PHC1-208ENST00000540574 C8orf76Q96K31 380 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms