RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 HSP90B1P14625 803 aaKnown RBP10.28□□□□□ -0.76
DDB1-217ENST00000540166 IL13P35225 146 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 CCDC183Q5T5S1 534 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 TRIM5Q9C035 493 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 CHMP3Q9Y3E7 222 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 IGSF1Q8N6C5 1336 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 A0A0G2JLW4 131 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 PDE6BP35913 854 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 DCTN1Q14203 1278 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 JDP2Q8WYK2 163 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 ZNF428Q96B54 188 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 NIP7Q9Y221 180 aaKnown RBP eCLIP10.28□□□□□ -0.76
DDB1-217ENST00000540166 NWD2Q9ULI1 1742 aa10.28□□□□□ -0.76
DDB1-217ENST00000540166 FKBP5Q13451 457 aaPredicted RBP10.27□□□□□ -0.76
DDB1-217ENST00000540166 PKP1Q13835 747 aa10.27□□□□□ -0.76
DDB1-217ENST00000540166 ZNF710Q8N1W2 664 aa10.27□□□□□ -0.76
DDB1-217ENST00000540166 RILPL2Q969X0 211 aa10.27□□□□□ -0.76
DDB1-217ENST00000540166 MIS18AQ9NYP9 233 aa10.27□□□□□ -0.76
DDB1-217ENST00000540166 IL16Q14005 1332 aa10.27□□□□□ -0.76
DDB1-217ENST00000540166 GTF2F1P35269 517 aaKnown RBP eCLIP10.27□□□□□ -0.77
DDB1-217ENST00000540166 DDIT3P35638 169 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 CWC15Q9P013 229 aaKnown RBP10.27□□□□□ -0.77
DDB1-217ENST00000540166 RNF181Q9P0P0 153 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 SRP68Q9UHB9 627 aaKnown RBP10.27□□□□□ -0.77
DDB1-217ENST00000540166 FIBPO43427 364 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 ZNF790Q6PG37 636 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 NOL10Q9BSC4 688 aaKnown RBP10.27□□□□□ -0.77
DDB1-217ENST00000540166 CD163L1Q9NR16 1453 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 PNPLA7Q6ZV29 1317 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 WDR33Q9C0J8 1336 aaKnown RBP10.27□□□□□ -0.77
DDB1-217ENST00000540166 SERPINB2P05120 415 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 NFE2L2Q16236 605 aa10.27□□□□□ -0.77
DDB1-217ENST00000540166 DDX58O95786 925 aaKnown RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 IRX5P78411 483 aaPredicted RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 NEXNQ0ZGT2 675 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 RIC3Q7Z5B4 369 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 TSPYL6Q8N831 410 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 CCDC192P0DO97 292 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 GPTP24298 496 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 CLEC17AQ6ZS10 378 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 CERS3Q8IU89 383 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 LINC00116Q8NCU8 138 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 ARGLU1Q9NWB6 273 aaPredicted RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 ZBTB7BO15156 539 aaPredicted RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 SMARCA5O60264 1052 aaPredicted RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 ZRSR1Q15695 479 aaKnown RBP10.26□□□□□ -0.77
DDB1-217ENST00000540166 CCDC24Q8N4L8 307 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 PAXBP1Q9Y5B6 917 aa10.26□□□□□ -0.77
DDB1-217ENST00000540166 PLCH1Q4KWH8 1693 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 MAP3K5Q99683 1374 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 GOLGA6L19H0YKK7 550 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 NOM1Q5C9Z4 860 aaKnown RBP10.25□□□□□ -0.77
DDB1-217ENST00000540166 RC3H1Q5TC82 1133 aaKnown RBP10.25□□□□□ -0.77
DDB1-217ENST00000540166 TTLL6Q8N841 843 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 ANO2Q9NQ90 1003 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 CNKSR1Q969H4 720 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 ZBTB3Q9H5J0 574 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 SMTNL1A8MU46 457 aa10.25□□□□□ -0.77
DDB1-217ENST00000540166 PIP4K2AP48426 406 aaPredicted RBP10.25□□□□□ -0.77
DDB1-217ENST00000540166 ZNF496Q96IT1 587 aaPredicted RBP10.25□□□□□ -0.77
DDB1-217ENST00000540166 KDM4AO75164 1064 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 A1BGP04217 495 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 GRM1Q13255 1194 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 PPP1R42Q7Z4L9 355 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 CHAMP1Q96JM3 812 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 NYXQ9GZU5 481 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 ZBTB1Q9Y2K1 713 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 ERC2O15083 957 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 VAMP4O75379 141 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 LMOD1P29536 600 aaPredicted RBP10.24□□□□□ -0.77
DDB1-217ENST00000540166 FBXW7Q969H0 707 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 TPM4P67936 248 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 ITPK1Q13572 414 aa10.24□□□□□ -0.77
DDB1-217ENST00000540166 ZNF397Q8NF99 534 aaPredicted RBP10.24□□□□□ -0.77
DDB1-217ENST00000540166 NRKQ7Z2Y5 1582 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 SLIT3O75094 1523 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 NKX1-1Q15270 411 aaPredicted RBP10.23□□□□□ -0.77
DDB1-217ENST00000540166 HSP90AB3PQ58FF7 597 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 HDGFL1Q5TGJ6 251 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 MRPL50Q8N5N7 158 aaKnown RBP10.23□□□□□ -0.77
DDB1-217ENST00000540166 AKT1S1Q96B36 256 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 MBIPQ9NS73 344 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 MEGF6O75095 1541 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 TGFB2P61812 414 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 NLGN2Q8NFZ4 835 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 PHACTR3Q96KR7 559 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 DPEP1P16444 411 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 BMS1Q14692 1282 aaKnown RBP10.23□□□□□ -0.77
DDB1-217ENST00000540166 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 NLRP3Q96P20 1036 aa10.23□□□□□ -0.77
DDB1-217ENST00000540166 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.23□□□□□ -0.77
DDB1-217ENST00000540166 V9GYY5 206 aaPredicted RBP10.23□□□□□ -0.77
DDB1-217ENST00000540166 GTF2A1P52655 376 aaPredicted RBP10.22□□□□□ -0.77
DDB1-217ENST00000540166 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 PLEKHF1Q96S99 279 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 ARHGAP45Q92619 1136 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 TMX3Q96JJ7 454 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 SMC3Q9UQE7 1217 aa10.22□□□□□ -0.77
DDB1-217ENST00000540166 DISP2A7MBM2 1401 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms