RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 H0YIN7 160 aa19.27■□□□□ 0.68
DDB1-216ENST00000539739 CSF1RP07333 972 aa19.27■□□□□ 0.68
DDB1-216ENST00000539739 RABL6Q3YEC7 729 aaPredicted RBP19.27■□□□□ 0.68
DDB1-216ENST00000539739 RPGRQ92834 1020 aaKnown RBP19.27■□□□□ 0.68
DDB1-216ENST00000539739 TGFB2P61812 414 aa19.26■□□□□ 0.67
DDB1-216ENST00000539739 CRY2Q49AN0 593 aa19.26■□□□□ 0.67
DDB1-216ENST00000539739 C3orf67Q6ZVT6 689 aa19.26■□□□□ 0.67
DDB1-216ENST00000539739 C2CD5Q86YS7 1000 aa19.26■□□□□ 0.67
DDB1-216ENST00000539739 DDX46Q7L014 1031 aaKnown RBP19.25■□□□□ 0.67
DDB1-216ENST00000539739 ANKRD44Q8N8A2 993 aa19.25■□□□□ 0.67
DDB1-216ENST00000539739 RBM17Q96I25 401 aaKnown RBP19.25■□□□□ 0.67
DDB1-216ENST00000539739 CCDC85AQ96PX6 553 aaPredicted RBP19.25■□□□□ 0.67
DDB1-216ENST00000539739 DDX60Q8IY21 1712 aaKnown RBP19.25■□□□□ 0.67
DDB1-216ENST00000539739 LAMB2P55268 1798 aa19.25■□□□□ 0.67
DDB1-216ENST00000539739 NPR1P16066 1061 aa19.25■□□□□ 0.67
DDB1-216ENST00000539739 CCDC57Q2TAC2 916 aa19.25■□□□□ 0.67
DDB1-216ENST00000539739 RPAP2Q8IXW5 612 aaPredicted RBP19.25■□□□□ 0.67
DDB1-216ENST00000539739 SRGNP10124 158 aa19.24■□□□□ 0.67
DDB1-216ENST00000539739 ATP8B2P98198 1209 aa19.24■□□□□ 0.67
DDB1-216ENST00000539739 IFIT5Q13325 482 aaKnown RBP19.24■□□□□ 0.67
DDB1-216ENST00000539739 MASTLQ96GX5 879 aa19.24■□□□□ 0.67
DDB1-216ENST00000539739 GREM2Q9H772 168 aa19.24■□□□□ 0.67
DDB1-216ENST00000539739 ANKRD18BA2A2Z9 1011 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 MTX1Q13505 466 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 FAM161AQ3B820 660 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 CEP85Q6P2H3 762 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 RTL9Q8NET4 1388 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 ANKRD31Q8N7Z5 1873 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 MYH3P11055 1940 aa19.23■□□□□ 0.67
DDB1-216ENST00000539739 SRGAP3O43295 1099 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 ITGA6P23229 1130 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 CHRNA5P30532 468 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 HOXA10P31260 410 aaPredicted RBP19.22■□□□□ 0.67
DDB1-216ENST00000539739 ZNF622Q969S3 477 aaKnown RBP eCLIP19.22■□□□□ 0.674e-6■■□□□ 13.5
DDB1-216ENST00000539739 CDC5LQ99459 802 aaKnown RBP19.22■□□□□ 0.67
DDB1-216ENST00000539739 TNRC6CQ9HCJ0 1690 aaKnown RBP19.22■□□□□ 0.67
DDB1-216ENST00000539739 HMMRO75330 724 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 ALDH1B1P30837 517 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 TAF7LQ5H9L4 462 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 STYK1Q6J9G0 422 aa19.22■□□□□ 0.67
DDB1-216ENST00000539739 FHDC1Q9C0D6 1143 aaPredicted RBP19.22■□□□□ 0.67
DDB1-216ENST00000539739 A0A0G2JLW4 131 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 DPEP1P16444 411 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 CNKSR1Q969H4 720 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 CRAMP1Q96RY5 1269 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 KIF13BQ9NQT8 1826 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 SEC31BQ9NQW1 1179 aa19.21■□□□□ 0.67
DDB1-216ENST00000539739 PNMA6EA0A0J9YXQ4 647 aa19.19■□□□□ 0.66
DDB1-216ENST00000539739 IGHMBP2P38935 993 aaKnown RBP19.19■□□□□ 0.66
DDB1-216ENST00000539739 GRAPQ13588 217 aa19.19■□□□□ 0.66
DDB1-216ENST00000539739 ERICH6BQ5W0A0 696 aa19.19■□□□□ 0.66
DDB1-216ENST00000539739 ANKRD18AQ8IVF6 992 aa19.19■□□□□ 0.66
DDB1-216ENST00000539739 GRAPLQ8TC17 118 aaPredicted RBP19.19■□□□□ 0.66
DDB1-216ENST00000539739 PCDHB15Q9Y5E8 787 aa19.19■□□□□ 0.66
DDB1-216ENST00000539739 RPS8P62241 208 aaKnown RBP19.18■□□□□ 0.66
DDB1-216ENST00000539739 SSH3Q8TE77 659 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 MPHOSPH8Q99549 860 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 DAXXQ9UER7 740 aaPredicted RBP19.18■□□□□ 0.66
DDB1-216ENST00000539739 LRP5O75197 1615 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 BBOX1O75936 387 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 POLA2Q14181 598 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 SYT17Q9BSW7 474 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 PIM2Q9P1W9 311 aa19.18■□□□□ 0.66
DDB1-216ENST00000539739 KCNA3P22001 575 aa19.17■□□□□ 0.66
DDB1-216ENST00000539739 TTLL6Q8N841 843 aa19.17■□□□□ 0.66
DDB1-216ENST00000539739 CELF1Q92879 486 aaKnown RBP19.17■□□□□ 0.66
DDB1-216ENST00000539739 RFX5P48382 616 aaPredicted RBP19.16■□□□□ 0.66
DDB1-216ENST00000539739 PTPN12Q05209 780 aaKnown RBP19.16■□□□□ 0.66
DDB1-216ENST00000539739 TMC4Q7Z404 712 aa19.16■□□□□ 0.66
DDB1-216ENST00000539739 SIRT2Q8IXJ6 389 aa19.16■□□□□ 0.66
DDB1-216ENST00000539739 NLGN2Q8NFZ4 835 aa19.16■□□□□ 0.66
DDB1-216ENST00000539739 ZNF594Q96JF6 807 aaPredicted RBP19.16■□□□□ 0.66
DDB1-216ENST00000539739 LDHAL6AQ6ZMR3 332 aa19.15■□□□□ 0.66
DDB1-216ENST00000539739 TMX4Q9H1E5 349 aaPredicted RBP19.15■□□□□ 0.66
DDB1-216ENST00000539739 RWDD1Q9H446 243 aaPredicted RBP19.15■□□□□ 0.66
DDB1-216ENST00000539739 COPRSQ9NQ92 184 aa19.15■□□□□ 0.66
DDB1-216ENST00000539739 TSHZ2Q9NRE2 1034 aa19.15■□□□□ 0.66
DDB1-216ENST00000539739 KLHDC4Q8TBB5 520 aa19.14■□□□□ 0.66
DDB1-216ENST00000539739 CNNM1Q9NRU3 951 aa19.14■□□□□ 0.66
DDB1-216ENST00000539739 BSDC1Q9NW68 430 aaPredicted RBP19.14■□□□□ 0.66
DDB1-216ENST00000539739 FBXO3Q9UK99 471 aa19.14■□□□□ 0.66
DDB1-216ENST00000539739 COL11A2P13942 1736 aaPredicted RBP19.14■□□□□ 0.66
DDB1-216ENST00000539739 PPEF1O14829 653 aaPredicted RBP19.14■□□□□ 0.65
DDB1-216ENST00000539739 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.651e-9■■□□□ 11.8
DDB1-216ENST00000539739 DALRD3Q5D0E6 543 aaKnown RBP19.14■□□□□ 0.65
DDB1-216ENST00000539739 PRPF40BQ6NWY9 871 aaKnown RBP19.14■□□□□ 0.65
DDB1-216ENST00000539739 PA2G4Q9UQ80 394 aaKnown RBP19.14■□□□□ 0.65
DDB1-216ENST00000539739 SURF6O75683 361 aaKnown RBP19.13■□□□□ 0.65
DDB1-216ENST00000539739 UBE2Q2Q8WVN8 375 aa19.13■□□□□ 0.65
DDB1-216ENST00000539739 SIL1Q9H173 461 aa19.13■□□□□ 0.65
DDB1-216ENST00000539739 EYA2O00167 538 aa19.12■□□□□ 0.65
DDB1-216ENST00000539739 HDAC1Q13547 482 aaPredicted RBP19.12■□□□□ 0.65
DDB1-216ENST00000539739 HSP90AB4PQ58FF6 505 aa19.12■□□□□ 0.65
DDB1-216ENST00000539739 CIAO1O76071 339 aa19.11■□□□□ 0.65
DDB1-216ENST00000539739 OS9Q13438 667 aaPredicted RBP19.11■□□□□ 0.65
DDB1-216ENST00000539739 NOP58Q9Y2X3 529 aaKnown RBP19.11■□□□□ 0.65
DDB1-216ENST00000539739 KIAA1551Q9HCM1 1747 aa19.11■□□□□ 0.65
DDB1-216ENST00000539739 DLEC1Q9Y238 1755 aa19.11■□□□□ 0.65
DDB1-216ENST00000539739 SP8Q8IXZ3 490 aa19.11■□□□□ 0.65
DDB1-216ENST00000539739 PUS3Q9BZE2 481 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms