RNA–Protein interactions for RNA: ENST00000539736.5

C12orf43-208, Transcript of chromosome 12 open reading frame 43, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene C12orf43, Length 1,033 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf43-208ENST00000539736 PNMA6EA0A0J9YXQ4 647 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 SRGAP3O43295 1099 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 HMMRO75330 724 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 POLA2Q14181 598 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 CCDC152Q4G0S7 254 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 SSH3Q8TE77 659 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 RTL9Q8NET4 1388 aa26.66■■□□□ 1.86
C12orf43-208ENST00000539736 KLRG2A4D1S0 409 aaPredicted RBP26.65■■□□□ 1.86
C12orf43-208ENST00000539736 C3orf67Q6ZVT6 689 aa26.65■■□□□ 1.86
C12orf43-208ENST00000539736 TNRC6CQ9HCJ0 1690 aaKnown RBP26.65■■□□□ 1.86
C12orf43-208ENST00000539736 ANKRD31Q8N7Z5 1873 aa26.64■■□□□ 1.86
C12orf43-208ENST00000539736 RWDD1Q9H446 243 aaPredicted RBP26.64■■□□□ 1.86
C12orf43-208ENST00000539736 PDE6BP35913 854 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 PTGER2P43116 358 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 CRY2Q49AN0 593 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 SPON1Q9HCB6 807 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 CHMP3Q9Y3E7 222 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 C10orf71Q711Q0 1435 aa26.63■■□□□ 1.85
C12orf43-208ENST00000539736 RFX5P48382 616 aaPredicted RBP26.62■■□□□ 1.85
C12orf43-208ENST00000539736 CCDC57Q2TAC2 916 aa26.62■■□□□ 1.85
C12orf43-208ENST00000539736 FAM161AQ3B820 660 aa26.62■■□□□ 1.85
C12orf43-208ENST00000539736 GREM2Q9H772 168 aa26.62■■□□□ 1.85
C12orf43-208ENST00000539736 IFIT5Q13325 482 aaKnown RBP26.61■■□□□ 1.85
C12orf43-208ENST00000539736 PDZRN3Q9UPQ7 1066 aa26.61■■□□□ 1.85
C12orf43-208ENST00000539736 ITGA6P23229 1130 aa26.6■■□□□ 1.85
C12orf43-208ENST00000539736 CCDC136Q96JN2 1154 aa26.6■■□□□ 1.85
C12orf43-208ENST00000539736 CCDC85AQ96PX6 553 aaPredicted RBP26.6■■□□□ 1.85
C12orf43-208ENST00000539736 ANKRD18BA2A2Z9 1011 aa26.59■■□□□ 1.85
C12orf43-208ENST00000539736 IGHDP01880 384 aa26.59■■□□□ 1.85
C12orf43-208ENST00000539736 COPRSQ9NQ92 184 aa26.59■■□□□ 1.85
C12orf43-208ENST00000539736 KIF13BQ9NQT8 1826 aa26.58■■□□□ 1.85
C12orf43-208ENST00000539736 HOXA10P31260 410 aaPredicted RBP26.57■■□□□ 1.84
C12orf43-208ENST00000539736 PTPN12Q05209 780 aaKnown RBP26.57■■□□□ 1.84
C12orf43-208ENST00000539736 DCTPP1Q9H773 170 aa26.57■■□□□ 1.84
C12orf43-208ENST00000539736 NOP58Q9Y2X3 529 aaKnown RBP26.57■■□□□ 1.84
C12orf43-208ENST00000539736 SRGNP10124 158 aa26.56■■□□□ 1.84
C12orf43-208ENST00000539736 DDX46Q7L014 1031 aaKnown RBP26.56■■□□□ 1.84
C12orf43-208ENST00000539736 RPGRQ92834 1020 aaKnown RBP26.56■■□□□ 1.84
C12orf43-208ENST00000539736 SEC31BQ9NQW1 1179 aa26.56■■□□□ 1.84
C12orf43-208ENST00000539736 B4GALNT3Q6L9W6 998 aa26.55■■□□□ 1.84
C12orf43-208ENST00000539736 CDC5LQ99459 802 aaKnown RBP26.55■■□□□ 1.84
C12orf43-208ENST00000539736 FBXO3Q9UK99 471 aa26.55■■□□□ 1.84
C12orf43-208ENST00000539736 NPR1P16066 1061 aa26.54■■□□□ 1.84
C12orf43-208ENST00000539736 TAF7LQ5H9L4 462 aa26.54■■□□□ 1.84
C12orf43-208ENST00000539736 GCC1Q96CN9 775 aa26.54■■□□□ 1.84
C12orf43-208ENST00000539736 RBM17Q96I25 401 aaKnown RBP26.54■■□□□ 1.84
C12orf43-208ENST00000539736 CRAMP1Q96RY5 1269 aa26.54■■□□□ 1.84
C12orf43-208ENST00000539736 H0YIN7 160 aa26.53■■□□□ 1.84
C12orf43-208ENST00000539736 SURF6O75683 361 aaKnown RBP26.53■■□□□ 1.84
C12orf43-208ENST00000539736 C2CD5Q86YS7 1000 aa26.53■■□□□ 1.84
C12orf43-208ENST00000539736 KLHDC4Q8TBB5 520 aa26.53■■□□□ 1.84
C12orf43-208ENST00000539736 MASTLQ96GX5 879 aa26.53■■□□□ 1.84
C12orf43-208ENST00000539736 PA2G4Q9UQ80 394 aaKnown RBP26.53■■□□□ 1.84
C12orf43-208ENST00000539736 KDM2BQ8NHM5 1336 aa26.53■■□□□ 1.84
C12orf43-208ENST00000539736 COL11A2P13942 1736 aaPredicted RBP26.52■■□□□ 1.84
C12orf43-208ENST00000539736 TGFB2P61812 414 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 GRAPQ13588 217 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 HSP90AB4PQ58FF6 505 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 STYK1Q6J9G0 422 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 SMC5Q8IY18 1101 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 GRAPLQ8TC17 118 aaPredicted RBP26.52■■□□□ 1.84
C12orf43-208ENST00000539736 ZNF594Q96JF6 807 aaPredicted RBP26.52■■□□□ 1.84
C12orf43-208ENST00000539736 CD2APQ9Y5K6 639 aa26.52■■□□□ 1.84
C12orf43-208ENST00000539736 CIAO1O76071 339 aa26.51■■□□□ 1.83
C12orf43-208ENST00000539736 IGHMBP2P38935 993 aaKnown RBP26.51■■□□□ 1.83
C12orf43-208ENST00000539736 CENPQQ7L2Z9 268 aaPredicted RBP26.51■■□□□ 1.83
C12orf43-208ENST00000539736 ANKRD18AQ8IVF6 992 aa26.51■■□□□ 1.83
C12orf43-208ENST00000539736 LRP5O75197 1615 aa26.5■■□□□ 1.83
C12orf43-208ENST00000539736 EYA2O00167 538 aa26.5■■□□□ 1.83
C12orf43-208ENST00000539736 RAB11FIP3O75154 756 aa26.5■■□□□ 1.83
C12orf43-208ENST00000539736 RPS8P62241 208 aaKnown RBP26.5■■□□□ 1.83
C12orf43-208ENST00000539736 G3BP1Q13283 466 aaKnown RBP eCLIP26.5■■□□□ 1.83
C12orf43-208ENST00000539736 CELF1Q92879 486 aaKnown RBP26.5■■□□□ 1.83
C12orf43-208ENST00000539736 EXOC6BQ9Y2D4 811 aa26.5■■□□□ 1.83
C12orf43-208ENST00000539736 ALDH1B1P30837 517 aa26.49■■□□□ 1.83
C12orf43-208ENST00000539736 LDHAL6AQ6ZMR3 332 aa26.49■■□□□ 1.83
C12orf43-208ENST00000539736 MPHOSPH8Q99549 860 aa26.49■■□□□ 1.83
C12orf43-208ENST00000539736 BBOX1O75936 387 aa26.48■■□□□ 1.83
C12orf43-208ENST00000539736 SIL1Q9H173 461 aa26.48■■□□□ 1.83
C12orf43-208ENST00000539736 BSDC1Q9NW68 430 aaPredicted RBP26.48■■□□□ 1.83
C12orf43-208ENST00000539736 TAF1P21675 1872 aa26.48■■□□□ 1.83
C12orf43-208ENST00000539736 DLEC1Q9Y238 1755 aa26.48■■□□□ 1.83
C12orf43-208ENST00000539736 COL4A1P02462 1669 aa26.47■■□□□ 1.83
C12orf43-208ENST00000539736 CHRNA5P30532 468 aa26.47■■□□□ 1.83
C12orf43-208ENST00000539736 IL15P40933 162 aaPredicted RBP26.47■■□□□ 1.83
C12orf43-208ENST00000539736 ERC1Q8IUD2 1116 aa26.47■■□□□ 1.83
C12orf43-208ENST00000539736 RIPOR2Q9Y4F9 1068 aa26.47■■□□□ 1.83
C12orf43-208ENST00000539736 KIAA1551Q9HCM1 1747 aa26.46■■□□□ 1.83
C12orf43-208ENST00000539736 LRRC24Q50LG9 513 aa26.46■■□□□ 1.83
C12orf43-208ENST00000539736 ATG9AQ7Z3C6 839 aa26.46■■□□□ 1.83
C12orf43-208ENST00000539736 CNKSR1Q969H4 720 aa26.46■■□□□ 1.83
C12orf43-208ENST00000539736 ZNF622Q969S3 477 aaKnown RBP eCLIP26.46■■□□□ 1.83
C12orf43-208ENST00000539736 PUS3Q9BZE2 481 aaKnown RBP26.46■■□□□ 1.83
C12orf43-208ENST00000539736 CNNM1Q9NRU3 951 aa26.46■■□□□ 1.83
C12orf43-208ENST00000539736 OS9Q13438 667 aaPredicted RBP26.45■■□□□ 1.82
C12orf43-208ENST00000539736 TMC4Q7Z404 712 aa26.45■■□□□ 1.82
C12orf43-208ENST00000539736 DPEP1P16444 411 aa26.44■■□□□ 1.82
C12orf43-208ENST00000539736 KCNA3P22001 575 aa26.44■■□□□ 1.82
C12orf43-208ENST00000539736 KIF1BPQ96EK5 621 aa26.44■■□□□ 1.82
C12orf43-208ENST00000539736 SPEF2Q9C093 1822 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms