RNA–Protein interactions for RNA: ENST00000539584.5

UBE3B-209, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 2,006 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-209ENST00000539584 NEK1Q96PY6 1258 aa15.66■□□□□ 0.1
UBE3B-209ENST00000539584 CCDC8Q9H0W5 538 aaPredicted RBP15.66■□□□□ 0.1
UBE3B-209ENST00000539584 BOLA2Q9H3K6 86 aa15.66■□□□□ 0.1
UBE3B-209ENST00000539584 CAMTA1Q9Y6Y1 1673 aa15.66■□□□□ 0.1
UBE3B-209ENST00000539584 UTP14CQ5TAP6 766 aaKnown RBP15.65■□□□□ 0.1
UBE3B-209ENST00000539584 CBX8Q9HC52 389 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 PYCARDQ9ULZ3 195 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 SLIT3O75094 1523 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 PROSER3Q2NL68 480 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 RIC3Q7Z5B4 369 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 ZNF710Q8N1W2 664 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 PAXBP1Q9Y5B6 917 aa15.65■□□□□ 0.1
UBE3B-209ENST00000539584 ZNF75DP51815 510 aa15.64■□□□□ 0.09
UBE3B-209ENST00000539584 SARM1Q6SZW1 724 aa15.64■□□□□ 0.09
UBE3B-209ENST00000539584 FERMT3Q86UX7 667 aa15.64■□□□□ 0.09
UBE3B-209ENST00000539584 SIPA1L3O60292 1781 aaPredicted RBP15.64■□□□□ 0.09
UBE3B-209ENST00000539584 NEURL1BA8MQ27 555 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 ZNF165P49910 485 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 GCKRQ14397 625 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 PDIA6Q15084 440 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 NAA16Q6N069 864 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-209ENST00000539584 MPNDQ8N594 471 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 SPC24Q8NBT2 197 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 ANKRD7Q92527 254 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 METTL22Q9BUU2 404 aaPredicted RBP15.63■□□□□ 0.09
UBE3B-209ENST00000539584 BCL2L12Q9HB09 334 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 GCP02774 474 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 IGKV5-2P06315 115 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 RESTQ13127 1097 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 LUZP1Q86V48 1076 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 BICD2Q8TD16 824 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 TRIM5Q9C035 493 aa15.63■□□□□ 0.09
UBE3B-209ENST00000539584 H3BQV1 296 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 CAMK4Q16566 473 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 TPRNQ4KMQ1 711 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 IFFO2Q5TF58 517 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 C17orf53Q8N3J3 647 aaPredicted RBP15.62■□□□□ 0.09
UBE3B-209ENST00000539584 SMARCC2Q8TAQ2 1214 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 PXDNQ92626 1479 aa15.62■□□□□ 0.09
UBE3B-209ENST00000539584 SMTNL1A8MU46 457 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 RIOK3O14730 519 aaKnown RBP15.61■□□□□ 0.09
UBE3B-209ENST00000539584 PTGS1P23219 599 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 MCMDC2Q4G0Z9 681 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 CCDC186Q7Z3E2 898 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 DRC7Q8IY82 874 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 PDCL2Q8N4E4 241 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 LRRC59Q96AG4 307 aaKnown RBP15.61■□□□□ 0.09
UBE3B-209ENST00000539584 FEZ1Q99689 392 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 RABL6Q3YEC7 729 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-209ENST00000539584 TNNI3KQ59H18 835 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 ZNF790Q6PG37 636 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 ZNF589Q86UQ0 364 aaPredicted RBP15.61■□□□□ 0.09
UBE3B-209ENST00000539584 ANKRD24Q8TF21 1146 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 MRFAP1L1Q96HT8 127 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 TLR7Q9NYK1 1049 aaKnown RBP15.61■□□□□ 0.09
UBE3B-209ENST00000539584 FPGT-TNNI3KV9GXZ4 949 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 FER1L4A9Z1Z3 1794 aa15.61■□□□□ 0.09
UBE3B-209ENST00000539584 GOLGA6L19H0YKK7 550 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 PFKFB2O60825 505 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 ZSCAN25Q6NSZ9 544 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 CKAP2LQ8IYA6 745 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 PGBD1Q96JS3 809 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 HAUS7Q99871 368 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 GTPBP4Q9BZE4 634 aaKnown RBP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 RCOR1Q9UKL0 485 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 PRDM4Q9UKN5 801 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 NR1I2O75469 434 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 DHX8Q14562 1220 aaKnown RBP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 ESCO1Q5FWF5 840 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 DDX54Q8TDD1 881 aaKnown RBP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 BRF1Q92994 677 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 ZNF396Q96N95 335 aaPredicted RBP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 TFIP11Q9UBB9 837 aaKnown RBP15.6■□□□□ 0.09
UBE3B-209ENST00000539584 SH3TC1Q8TE82 1336 aa15.6■□□□□ 0.09
UBE3B-209ENST00000539584 STX1AQ16623 288 aa15.59■□□□□ 0.09
UBE3B-209ENST00000539584 FAM173BQ6P4H8 233 aa15.59■□□□□ 0.09
UBE3B-209ENST00000539584 CLIP2Q9UDT6 1046 aa15.59■□□□□ 0.09
UBE3B-209ENST00000539584 RGPD2P0DJD1 1756 aa15.59■□□□□ 0.09
UBE3B-209ENST00000539584 RFX5P48382 616 aaPredicted RBP15.58■□□□□ 0.09
UBE3B-209ENST00000539584 AIMP1Q12904 312 aaKnown RBP15.58■□□□□ 0.09
UBE3B-209ENST00000539584 Q6ZUG5 572 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 DHX32Q7L7V1 743 aaKnown RBP15.58■□□□□ 0.09
UBE3B-209ENST00000539584 DSCC1Q9BVC3 393 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 AGXT2Q9BYV1 514 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 SIL1Q9H173 461 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 HELLSQ9NRZ9 838 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 DBNLQ9UJU6 430 aaKnown RBP15.58■□□□□ 0.09
UBE3B-209ENST00000539584 CHMP3Q9Y3E7 222 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.58■□□□□ 0.09
UBE3B-209ENST00000539584 MST1RQ04912 1400 aa15.58■□□□□ 0.09
UBE3B-209ENST00000539584 ABCC6O95255 1503 aa15.58■□□□□ 0.08
UBE3B-209ENST00000539584 RBM6P78332 1123 aaKnown RBP15.58■□□□□ 0.08
UBE3B-209ENST00000539584 PTPN12Q05209 780 aaKnown RBP15.58■□□□□ 0.08
UBE3B-209ENST00000539584 DMTNQ08495 405 aa15.58■□□□□ 0.08
UBE3B-209ENST00000539584 PPP4R3BQ5MIZ7 849 aa15.58■□□□□ 0.08
UBE3B-209ENST00000539584 ANKRD13DQ6ZTN6 518 aa15.58■□□□□ 0.08
UBE3B-209ENST00000539584 ANKLE2Q86XL3 938 aa15.58■□□□□ 0.08
UBE3B-209ENST00000539584 FBXL16Q8N461 479 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms