RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 DACT1Q9NYF0 836 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 TLR7Q9NYK1 1049 aaKnown RBP11.45□□□□□ -0.58
CDH13-204ENST00000539548 MRC1P22897 1456 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 TAF5LO75529 589 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 CHAF1AQ13111 956 aaPredicted RBP11.45□□□□□ -0.58
CDH13-204ENST00000539548 KRT32Q14532 448 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 CBX8Q9HC52 389 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 TFIP11Q9UBB9 837 aaKnown RBP11.45□□□□□ -0.58
CDH13-204ENST00000539548 CHMP3Q9Y3E7 222 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 PXDNQ92626 1479 aa11.45□□□□□ -0.58
CDH13-204ENST00000539548 PDIA6Q15084 440 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 ANO6Q4KMQ2 910 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.44□□□□□ -0.58
CDH13-204ENST00000539548 LUZP1Q86V48 1076 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 TDRD7Q8NHU6 1098 aaKnown RBP11.44□□□□□ -0.58
CDH13-204ENST00000539548 PRDM4Q9UKN5 801 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 TAF6LQ9Y6J9 622 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 PRAMEF22A3QJZ6 481 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 IGKV5-2P06315 115 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 PTGS1P23219 599 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 PSME1Q06323 249 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 PLA2G4DQ86XP0 818 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 TCEANC2Q96MN5 208 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 BCL2L12Q9HB09 334 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 ADAMTS7Q9UKP4 1686 aa11.44□□□□□ -0.58
CDH13-204ENST00000539548 RIOK3O14730 519 aaKnown RBP11.43□□□□□ -0.58
CDH13-204ENST00000539548 CAVIN2O95810 425 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 ATP5JP18859 108 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 ZNF75DP51815 510 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 ZNF589Q86UQ0 364 aaPredicted RBP11.43□□□□□ -0.58
CDH13-204ENST00000539548 CKAP2LQ8IYA6 745 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 CTIFO43310 598 aaKnown RBP11.43□□□□□ -0.58
CDH13-204ENST00000539548 RESTQ13127 1097 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 CCDC186Q7Z3E2 898 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 ARHGEF25Q86VW2 580 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 GTF3C6Q969F1 213 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 PGBD1Q96JS3 809 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 SIL1Q9H173 461 aa11.43□□□□□ -0.58
CDH13-204ENST00000539548 CAMTA1Q9Y6Y1 1673 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 RFX7Q2KHR2 1363 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 NEURL1BA8MQ27 555 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 AIMP1Q12904 312 aaKnown RBP11.42□□□□□ -0.58
CDH13-204ENST00000539548 STK3Q13188 491 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 RIC3Q7Z5B4 369 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 NEK1Q96PY6 1258 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 ZSCAN16Q9H4T2 348 aaPredicted RBP11.42□□□□□ -0.58
CDH13-204ENST00000539548 COPRSQ9NQ92 184 aa11.42□□□□□ -0.58
CDH13-204ENST00000539548 NR1I2O75469 434 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 NEXNQ0ZGT2 675 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 GCKRQ14397 625 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 ANKRD7Q92527 254 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 ARID3AQ99856 593 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 TRIM5Q9C035 493 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 U3KPZ7 1027 aaPredicted RBP11.41□□□□□ -0.58
CDH13-204ENST00000539548 GCP02774 474 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 CDC25BP30305 580 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 ZNF165P49910 485 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 DRC7Q8IY82 874 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 KLHDC4Q8TBB5 520 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 ANKRD24Q8TF21 1146 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 BRF1Q92994 677 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 METTL22Q9BUU2 404 aaPredicted RBP11.41□□□□□ -0.58
CDH13-204ENST00000539548 CFAP45Q9UL16 551 aa11.41□□□□□ -0.58
CDH13-204ENST00000539548 SLIT3O75094 1523 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 MYH15Q9Y2K3 1946 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 EPHA10Q5JZY3 1008 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 ZSCAN25Q6NSZ9 544 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 BICD2Q8TD16 824 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 LLPHQ9BRT6 129 aaKnown RBP11.4□□□□□ -0.58
CDH13-204ENST00000539548 COL15A1P39059 1388 aa11.4□□□□□ -0.58
CDH13-204ENST00000539548 FAM177BA6PVY3 158 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 JAK2O60674 1132 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 RFX5P48382 616 aaPredicted RBP11.4□□□□□ -0.59
CDH13-204ENST00000539548 SYCP1Q15431 976 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 ESCO1Q5FWF5 840 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 PPP4R3BQ5MIZ7 849 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 UTP14CQ5TAP6 766 aaKnown RBP11.4□□□□□ -0.59
CDH13-204ENST00000539548 Q6ZUG5 572 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 PDCL2Q8N4E4 241 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 SMARCC2Q8TAQ2 1214 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 NRBP1Q9UHY1 535 aa11.4□□□□□ -0.59
CDH13-204ENST00000539548 DBNLQ9UJU6 430 aaKnown RBP11.4□□□□□ -0.59
CDH13-204ENST00000539548 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 H3BQV1 296 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 TNNI3KQ59H18 835 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 IFFO2Q5TF58 517 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 EDC3Q96F86 508 aaKnown RBP11.39□□□□□ -0.59
CDH13-204ENST00000539548 DNAJC25Q9H1X3 360 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 RCOR1Q9UKL0 485 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 FPGT-TNNI3KV9GXZ4 949 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 C5P01031 1676 aa11.39□□□□□ -0.59
CDH13-204ENST00000539548 SMTNL1A8MU46 457 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 CTAGE5O15320 804 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 PFKFB2O60825 505 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 ADD1P35611 737 aaKnown RBP11.38□□□□□ -0.59
CDH13-204ENST00000539548 PTPN12Q05209 780 aaKnown RBP11.38□□□□□ -0.59
CDH13-204ENST00000539548 LRMPQ12912 555 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 IQCB1Q15051 598 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 MCMDC2Q4G0Z9 681 aa11.38□□□□□ -0.59
CDH13-204ENST00000539548 NAA16Q6N069 864 aaPredicted RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms