RNA–Protein interactions for RNA: ENST00000539429.1

GTF2H3-207, Transcript of general transcription factor IIH subunit 3, humanhuman

TSL 2

Gene GTF2H3, Length 858 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H3-207ENST00000539429 LMOD3Q0VAK6 560 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 RC3H1Q5TC82 1133 aaKnown RBP12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 SMIM5Q71RC9 77 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 SLF2Q8IX21 1173 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 DNAJC10Q8IXB1 793 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 RUNDC1Q96C34 613 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 FMNL2Q96PY5 1086 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 ARXQ96QS3 562 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 GOPCQ9HD26 462 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 ADAMTS8Q9UP79 889 aa12.42□□□□□ -0.42
GTF2H3-207ENST00000539429 CNTNAP4Q9C0A0 1308 aa12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 STARD3NLO95772 234 aa12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 RFC4P35249 363 aa12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 CRKLP46109 303 aaKnown RBP12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 TAF7Q15545 349 aaPredicted RBP12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 MRS2Q9HD23 443 aa12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 RRP7AQ9Y3A4 280 aaKnown RBP12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 CEMIPQ8WUJ3 1361 aa12.41□□□□□ -0.42
GTF2H3-207ENST00000539429 RPS6KA4O75676 772 aa12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 TMPOP42166 694 aaKnown RBP12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 CDAN1Q8IWY9 1227 aa12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 TEX13AQ9BXU3 409 aaPredicted RBP12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 CCDC87Q9NVE4 849 aa12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 ZNF330Q9Y3S2 320 aaPredicted RBP12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 GTF3C3Q9Y5Q9 886 aa12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 KCPQ6ZWJ8 1503 aa12.4□□□□□ -0.42
GTF2H3-207ENST00000539429 GOLGA8CPA6NN73 597 aa12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 SH3D19Q5HYK7 790 aa12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 PNISRQ8TF01 805 aaKnown RBP12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 THUMPD2Q9BTF0 503 aaKnown RBP12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 MIS18AQ9NYP9 233 aa12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 CICQ96RK0 1608 aaPredicted RBP12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 HEG1Q9ULI3 1381 aa12.39□□□□□ -0.43
GTF2H3-207ENST00000539429 C4AP0C0L4 1744 aa12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 SLC10A3P09131 477 aa12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 CANXP27824 592 aaKnown RBP12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 DIXDC1Q155Q3 683 aa12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 LRCH3Q96II8 777 aa12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 LAS1LQ9Y4W2 734 aaKnown RBP12.38□□□□□ -0.43
GTF2H3-207ENST00000539429 KCNQ3O43525 872 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 ZPR1O75312 459 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 CYP19A1P11511 503 aaPredicted RBP12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 AMIGO3Q86WK7 504 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 TBC1D2Q9BYX2 928 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 FHDC1Q9C0D6 1143 aaPredicted RBP12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 TSPYL4Q9UJ04 414 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 KDM3BQ7LBC6 1761 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 COL24A1Q17RW2 1714 aa12.37□□□□□ -0.43
GTF2H3-207ENST00000539429 RNF40O75150 1001 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 SNRPA1P09661 255 aaKnown RBP12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 GCGRP47871 477 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 CCDC184Q52MB2 194 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 NLGN1Q8N2Q7 840 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 ANKK1Q8NFD2 765 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 SPIRE2Q8WWL2 714 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 ZBTB1Q9Y2K1 713 aa12.36□□□□□ -0.43
GTF2H3-207ENST00000539429 APAF1O14727 1248 aa12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 SKIV2LQ15477 1246 aaKnown RBP12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 MYSM1Q5VVJ2 828 aa12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 INTS5Q6P9B9 1019 aaKnown RBP12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 NUTM1Q86Y26 1132 aa12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 LAMB4A4D0S4 1761 aa12.35□□□□□ -0.43
GTF2H3-207ENST00000539429 PCMTD1Q96MG8 357 aaPredicted RBP12.34□□□□□ -0.43
GTF2H3-207ENST00000539429 SYT17Q9BSW7 474 aa12.34□□□□□ -0.43
GTF2H3-207ENST00000539429 PARP3Q9Y6F1 533 aa12.34□□□□□ -0.43
GTF2H3-207ENST00000539429 COL15A1P39059 1388 aa12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 A0A087WZG4 1122 aa12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 MMP10P09238 476 aa12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 FAM9BQ8IZU0 186 aa12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 SRP68Q9UHB9 627 aaKnown RBP12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 SOS1Q07889 1333 aaPredicted RBP12.33□□□□□ -0.44
GTF2H3-207ENST00000539429 SENP3-EIF4A1A0A087X0R7 540 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 SOWAHBA6NEL2 793 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 KDM4AO75164 1064 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 A1BGP04217 495 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 GYS1P13807 737 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 CALD1Q05682 793 aaKnown RBP12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 USPL1Q5W0Q7 1092 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 WNT2BQ93097 391 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 USP42Q9H9J4 1324 aaKnown RBP12.32□□□□□ -0.44
GTF2H3-207ENST00000539429 PRAMEF22A3QJZ6 481 aa12.31□□□□□ -0.44
GTF2H3-207ENST00000539429 IL6STP40189 918 aaPredicted RBP12.31□□□□□ -0.44
GTF2H3-207ENST00000539429 PIP4K2AP48426 406 aaPredicted RBP12.31□□□□□ -0.44
GTF2H3-207ENST00000539429 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
GTF2H3-207ENST00000539429 NPHP1O15259 732 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 CFHP08603 1231 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 EIF4A1P60842 406 aaKnown RBP12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 GPR162Q16538 588 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 BICDL1Q6ZP65 573 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 NGEFQ8N5V2 710 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 BABAM1Q9NWV8 329 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 NARFQ9UHQ1 456 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 TBC1D2BQ9UPU7 963 aa12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 SALL2Q9Y467 1007 aaPredicted RBP12.3□□□□□ -0.44
GTF2H3-207ENST00000539429 GIGYF1O75420 1035 aaPredicted RBP12.29□□□□□ -0.44
GTF2H3-207ENST00000539429 EIF2S2P20042 333 aaKnown RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms