RNA–Protein interactions for RNA: ENST00000539030.5

SCNN1A-213, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3

Gene SCNN1A, Length 315 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-213ENST00000539030 LMBR1LQ6UX01 489 aa8.75□□□□□ -1.01
SCNN1A-213ENST00000539030 SYNE4Q8N205 404 aa8.75□□□□□ -1.01
SCNN1A-213ENST00000539030 KAZALD1Q96I82 304 aa8.75□□□□□ -1.01
SCNN1A-213ENST00000539030 BRIP1Q9BX63 1249 aa8.75□□□□□ -1.01
SCNN1A-213ENST00000539030 CHMP3Q9Y3E7 222 aa8.75□□□□□ -1.01
SCNN1A-213ENST00000539030 COL24A1Q17RW2 1714 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 IFIT5Q13325 482 aaKnown RBP8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 HDAC1Q13547 482 aaPredicted RBP8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 EPHA10Q5JZY3 1008 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 TTLL11Q8NHH1 800 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 SSH3Q8TE77 659 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 CCDC136Q96JN2 1154 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 SPON1Q9HCB6 807 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 PCDHB15Q9Y5E8 787 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 GTF3C3Q9Y5Q9 886 aa8.74□□□□□ -1.01
SCNN1A-213ENST00000539030 RTL9Q8NET4 1388 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 ABCC12Q96J65 1359 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 CASZ1Q86V15 1759 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 ANKRD18BA2A2Z9 1011 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 KLRG2A4D1S0 409 aaPredicted RBP8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 HSP90AB4PQ58FF6 505 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 DDX46Q7L014 1031 aaKnown RBP8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 CCDC24Q8N4L8 307 aa8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 RBM17Q96I25 401 aaKnown RBP8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 CDC5LQ99459 802 aaKnown RBP8.73□□□□□ -1.01
SCNN1A-213ENST00000539030 PNMA6EA0A0J9YXQ4 647 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 H0YIN7 160 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 ITGA6P23229 1130 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 POLA2Q14181 598 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 FAM161AQ3B820 660 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 RPGRQ92834 1020 aaKnown RBP8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 GCC1Q96CN9 775 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 SGIP1Q9BQI5 828 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 GREM2Q9H772 168 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 COPRSQ9NQ92 184 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 FBXO3Q9UK99 471 aa8.72□□□□□ -1.01
SCNN1A-213ENST00000539030 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.01
SCNN1A-213ENST00000539030 NPR1P16066 1061 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 ALDH1B1P30837 517 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 HOXA10P31260 410 aaPredicted RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 IGHMBP2P38935 993 aaKnown RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 PTGER2P43116 358 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 TGFB2P61812 414 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 PTPN12Q05209 780 aaKnown RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 G3BP1Q13283 466 aaKnown RBP eCLIP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 CRY2Q49AN0 593 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 CENPQQ7L2Z9 268 aaPredicted RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 SIRT2Q8IXJ6 389 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 MASTLQ96GX5 879 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 MPHOSPH8Q99549 860 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 DCTPP1Q9H773 170 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 ZBTB47Q9UFB7 747 aaPredicted RBP8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 CD2APQ9Y5K6 639 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 C10orf71Q711Q0 1435 aa8.71□□□□□ -1.02
SCNN1A-213ENST00000539030 RAB11FIP3O75154 756 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 SURF6O75683 361 aaKnown RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 BBOX1O75936 387 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 IL15P40933 162 aaPredicted RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 RFX5P48382 616 aaPredicted RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 OS9Q13438 667 aaPredicted RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 GRAPQ13588 217 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 TMC4Q7Z404 712 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 C2CD5Q86YS7 1000 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 ERC1Q8IUD2 1116 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 ANKRD18AQ8IVF6 992 aa8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 GRAPLQ8TC17 118 aaPredicted RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 NOP58Q9Y2X3 529 aaKnown RBP8.7□□□□□ -1.02
SCNN1A-213ENST00000539030 LAMB2P55268 1798 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 EYA2O00167 538 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 CIAO1O76071 339 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 IGHDP01880 384 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 SRGNP10124 158 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 RPS8P62241 208 aaKnown RBP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 STYK1Q6J9G0 422 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 B4GALNT3Q6L9W6 998 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 LDHAL6AQ6ZMR3 332 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 SMC5Q8IY18 1101 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 CNKSR1Q969H4 720 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 ZNF622Q969S3 477 aaKnown RBP eCLIP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 ZNF594Q96JF6 807 aaPredicted RBP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 TMX4Q9H1E5 349 aaPredicted RBP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 SEC31BQ9NQW1 1179 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 CNNM1Q9NRU3 951 aa8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 BSDC1Q9NW68 430 aaPredicted RBP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 PA2G4Q9UQ80 394 aaKnown RBP8.69□□□□□ -1.02
SCNN1A-213ENST00000539030 DDX60Q8IY21 1712 aaKnown RBP8.68□□□□□ -1.02
SCNN1A-213ENST00000539030 CELF1Q92879 486 aaKnown RBP8.68□□□□□ -1.02
SCNN1A-213ENST00000539030 KIF1BPQ96EK5 621 aa8.68□□□□□ -1.02
SCNN1A-213ENST00000539030 SIL1Q9H173 461 aa8.68□□□□□ -1.02
SCNN1A-213ENST00000539030 EXOC6BQ9Y2D4 811 aa8.68□□□□□ -1.02
SCNN1A-213ENST00000539030 PRELPP51888 382 aa8.67□□□□□ -1.02
SCNN1A-213ENST00000539030 MROH5Q6ZUA9 1318 aa8.67□□□□□ -1.02
SCNN1A-213ENST00000539030 KLHL34Q8N239 644 aa8.67□□□□□ -1.02
SCNN1A-213ENST00000539030 KDM2BQ8NHM5 1336 aa8.67□□□□□ -1.02
SCNN1A-213ENST00000539030 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
SCNN1A-213ENST00000539030 RHPN1Q8TCX5 695 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms