RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 C3orf67Q6ZVT6 689 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 SGIP1Q9BQI5 828 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 GREM2Q9H772 168 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 ANKRD36CQ5JPF3 1778 aa10.72□□□□□ -0.69
LPCAT3-208ENST00000538987 A0A0G2JLW4 131 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 ITGA6P23229 1130 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 CHRNA5P30532 468 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 ALDH1B1P30837 517 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 FAM161AQ3B820 660 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 CASZ1Q86V15 1759 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 ANKRD44Q8N8A2 993 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 MASTLQ96GX5 879 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 PDZRN3Q9UPQ7 1066 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 PCDHB15Q9Y5E8 787 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 CD2APQ9Y5K6 639 aa10.71□□□□□ -0.69
LPCAT3-208ENST00000538987 PNMA6EA0A0J9YXQ4 647 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 NPR1P16066 1061 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 IGHMBP2P38935 993 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 TGFB2P61812 414 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 OS9Q13438 667 aaPredicted RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 RABL6Q3YEC7 729 aaPredicted RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 ERICH6BQ5W0A0 696 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 ANKRD18AQ8IVF6 992 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 ZNF594Q96JF6 807 aaPredicted RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 CDC5LQ99459 802 aaKnown RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 MPHOSPH8Q99549 860 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 BCL11AQ9H165 835 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 TMX4Q9H1E5 349 aaPredicted RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 RWDD1Q9H446 243 aaPredicted RBP10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 SEC31BQ9NQW1 1179 aa10.7□□□□□ -0.7
LPCAT3-208ENST00000538987 KLRG2A4D1S0 409 aaPredicted RBP10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 SURF6O75683 361 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 SRGNP10124 158 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 DPEP1P16444 411 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 RPS8P62241 208 aaKnown RBP10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 G3BP1Q13283 466 aaKnown RBP eCLIP10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 LDHAL6AQ6ZMR3 332 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 KLHDC4Q8TBB5 520 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 CCDC136Q96JN2 1154 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 FHDC1Q9C0D6 1143 aaPredicted RBP10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 SIL1Q9H173 461 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 CNNM1Q9NRU3 951 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 WWC3Q9ULE0 1092 aa10.69□□□□□ -0.7
LPCAT3-208ENST00000538987 COL24A1Q17RW2 1714 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 APBB1O00213 710 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 MTX1Q13505 466 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 CRY2Q49AN0 593 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 STYK1Q6J9G0 422 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 SIRT2Q8IXJ6 389 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 SSH3Q8TE77 659 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 CNKSR1Q969H4 720 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 CRAMP1Q96RY5 1269 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 PPP4R2Q9NY27 417 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 PIM2Q9P1W9 311 aa10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 ZNF219Q9P2Y4 722 aaPredicted RBP10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 ZBTB47Q9UFB7 747 aaPredicted RBP10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 PA2G4Q9UQ80 394 aaKnown RBP10.68□□□□□ -0.7
LPCAT3-208ENST00000538987 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 C10orf71Q711Q0 1435 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 BBOX1O75936 387 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 HOXA10P31260 410 aaPredicted RBP10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 GRAPQ13588 217 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 POLA2Q14181 598 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 HSP90AB4PQ58FF6 505 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 TTLL6Q8N841 843 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 GRAPLQ8TC17 118 aaPredicted RBP10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 CELF1Q92879 486 aaKnown RBP10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 GTF3C3Q9Y5Q9 886 aa10.67□□□□□ -0.7
LPCAT3-208ENST00000538987 PPEF1O14829 653 aaPredicted RBP10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 PTPN12Q05209 780 aaKnown RBP10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 PELP1Q8IZL8 1130 aaKnown RBP10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 NLGN2Q8NFZ4 835 aa10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 SYT17Q9BSW7 474 aa10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 PUS3Q9BZE2 481 aaKnown RBP10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 COPRSQ9NQ92 184 aa10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 EXOC6BQ9Y2D4 811 aa10.66□□□□□ -0.7
LPCAT3-208ENST00000538987 RTL9Q8NET4 1388 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 N4BP2Q86UW6 1770 aaPredicted RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 EYA2O00167 538 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 IGHDP01880 384 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 KCNA3P22001 575 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 RFX5P48382 616 aaPredicted RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 HDAC1Q13547 482 aaPredicted RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 LRRC24Q50LG9 513 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 DALRD3Q5D0E6 543 aaKnown RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 METTL24Q5JXM2 366 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 B4GALNT3Q6L9W6 998 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 PRPF40BQ6NWY9 871 aaKnown RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 BSDC1Q9NW68 430 aaPredicted RBP10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 BCS1LQ9Y276 419 aa10.65□□□□□ -0.7
LPCAT3-208ENST00000538987 NRXN2Q9P2S2 1712 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 C21orf2O43822 256 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 IL15P40933 162 aaPredicted RBP10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 KCNJ4P48050 445 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 TMC4Q7Z404 712 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 ERC1Q8IUD2 1116 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 HELBQ8NG08 1087 aaPredicted RBP10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 GCC1Q96CN9 775 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 DCTPP1Q9H773 170 aa10.64□□□□□ -0.71
LPCAT3-208ENST00000538987 ANKIB1Q9P2G1 1089 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms