RNA–Protein interactions for RNA: ENST00000538941.6

SCAPER-203, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 1 (best) BASIC

Gene SCAPER, Length 4,853 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-203ENST00000538941 LRRC8AQ8IWT6 810 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 TRIM34Q9BYJ4 488 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 RASSF4Q9H2L5 321 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 ELP1O95163 1332 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 PI4KAP2A4QPH2 592 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 HSP90AB2PQ58FF8 381 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 PI4KAP1Q8N8J0 262 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 CCDC191Q8NCU4 936 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 MRFAP1L1Q96HT8 127 aa7.94□□□□□ -1.14
SCAPER-203ENST00000538941 CSB-PGBD3P0DP91 1061 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 RPS6KB1P23443 525 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 PIP4K2AP48426 406 aaPredicted RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 UBASH3AP57075 661 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 CCT2P78371 535 aaKnown RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 FAM160A1Q05DH4 1040 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 MTHFSDQ2M296 383 aaKnown RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 KCNG4Q8TDN1 519 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 HYPKQ9NX55 129 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 USP16Q9Y5T5 823 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 Q6ZUG5 572 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 TTC6Q86TZ1 520 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 IFNKQ9P0W0 207 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 CPSF1Q10570 1443 aaKnown RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 ME3Q16798 604 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 ZNF530Q6P9A1 599 aaPredicted RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 CTR9Q6PD62 1173 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 ABTB2Q8N961 1025 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 FAM107BQ9H098 131 aa7.93□□□□□ -1.14
SCAPER-203ENST00000538941 DBF4Q9UBU7 674 aaPredicted RBP7.93□□□□□ -1.14
SCAPER-203ENST00000538941 GOLGA1Q92805 767 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 DDX41Q9UJV9 622 aaKnown RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 SLC27A2O14975 620 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 MCM3P25205 808 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 KIF4BQ2VIQ3 1234 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 MAP9Q49MG5 647 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 KRBA2Q6ZNG9 492 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 CCDC12Q8WUD4 166 aaPredicted RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 ANKRD7Q92527 254 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 PCMTD1Q96MG8 357 aaPredicted RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 LSG1Q9H089 658 aaKnown RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 TMX1Q9H3N1 280 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 NRBP1Q9UHY1 535 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 ERICH2A1L162 156 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 RDXP35241 583 aaKnown RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 ZSWIM6Q9HCJ5 1215 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 ZNF330Q9Y3S2 320 aaPredicted RBP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 EFCAB6Q5THR3 1501 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 LRRC7Q96NW7 1537 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 VGLL3A8MV65 326 aa7.92□□□□□ -1.14
SCAPER-203ENST00000538941 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.92□□□□□ -1.14
SCAPER-203ENST00000538941 EVCP57679 992 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 IMMTQ16891 758 aaKnown RBP7.91□□□□□ -1.14
SCAPER-203ENST00000538941 ZNF710Q8N1W2 664 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 MAP3K2Q9Y2U5 619 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 NR1I2O75469 434 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 KIAA0754O94854 1291 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 GTF2A1P52655 376 aaPredicted RBP7.91□□□□□ -1.14
SCAPER-203ENST00000538941 TERF2Q15554 542 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 CCDC148Q8NFR7 591 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 MYOM1P52179 1685 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 FOXO3O43524 673 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 ALDH1L1O75891 902 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 XBP1P17861 261 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 SKIDA1Q1XH10 827 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 IQCEQ6IPM2 695 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 UNC5CLQ8IV45 518 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 CNNM3Q8NE01 707 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 SSH3Q8TE77 659 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 CACTINQ8WUQ7 758 aaKnown RBP7.91□□□□□ -1.14
SCAPER-203ENST00000538941 AATKQ6ZMQ8 1374 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 FBXO31Q5XUX0 539 aaPredicted RBP7.91□□□□□ -1.14
SCAPER-203ENST00000538941 PLCD4Q9BRC7 762 aa7.91□□□□□ -1.14
SCAPER-203ENST00000538941 ACEP12821 1306 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 LMOD1P29536 600 aaPredicted RBP7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CCDC158Q5M9N0 1113 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CCDC47Q96A33 483 aaKnown RBP7.9□□□□□ -1.14
SCAPER-203ENST00000538941 LLPHQ9BRT6 129 aaKnown RBP7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CRACR2AQ9BSW2 395 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CHPF2Q9P2E5 772 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 GLI2P10070 1586 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 ATP7BP35670 1465 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CDK12Q9NYV4 1490 aaPredicted RBP7.9□□□□□ -1.14
SCAPER-203ENST00000538941 PTPDC1A2A3K4 754 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 POLR3DP05423 398 aaPredicted RBP7.9□□□□□ -1.14
SCAPER-203ENST00000538941 SYKP43405 635 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 TUBB4BP68371 445 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 ERCC6LQ2NKX8 1250 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 C10orf67Q8IYJ2 551 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 RASEFQ8IZ41 740 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CEP112Q8N8E3 955 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 PNPLA6Q8IY17 1366 aa7.9□□□□□ -1.14
SCAPER-203ENST00000538941 CTIFO43310 598 aaKnown RBP7.9□□□□□ -1.15
SCAPER-203ENST00000538941 CAPN2P17655 700 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 TTC39AQ5SRH9 613 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 ISM2Q6H9L7 571 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 AEBP2Q6ZN18 517 aaPredicted RBP7.9□□□□□ -1.15
SCAPER-203ENST00000538941 KCNF1Q9H3M0 494 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 BRMS1Q9HCU9 246 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 TPCN1Q9ULQ1 816 aa7.9□□□□□ -1.15
SCAPER-203ENST00000538941 MORC2Q9Y6X9 1032 aaPredicted RBP7.9□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms