RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 GRNP28799 593 aaKnown RBP4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 SOX11P35716 441 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 HIF1AQ16665 826 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 CCDC102BQ68D86 513 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 INTS5Q6P9B9 1019 aaKnown RBP4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 POTEAQ6S8J7 498 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 TRPM4Q8TD43 1214 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 CHMP7Q8WUX9 453 aaPredicted RBP4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 ADGRE2Q9UHX3 823 aa4.88□□□□□ -1.63
CBX3P4-201ENST00000538909 USP17L5A8MUK1 530 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 SASH3O75995 380 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 MAP3K6O95382 1288 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 RARAP10276 462 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 GPLD1P80108 840 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 NFIAQ12857 509 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 Q6ZS46 218 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 DTX1Q86Y01 620 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 IL22RA1Q8N6P7 574 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 TSEN2Q8NCE0 465 aaKnown RBP4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 TTC9Q92623 222 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 C7orf69Q9H7B7 122 aa4.87□□□□□ -1.63
CBX3P4-201ENST00000538909 HMX2A2RU54 273 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 ZBTB7BO15156 539 aaPredicted RBP4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 C21orf2O43822 256 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 LZTS3O60299 673 aaPredicted RBP4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 C8AP07357 584 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 EPB42P16452 691 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 TRIM50Q86XT4 487 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 TRIM42Q8IWZ5 723 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 ARMC10Q8N2F6 343 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 PLD4Q96BZ4 506 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 IFT43Q96FT9 208 aa4.86□□□□□ -1.63
CBX3P4-201ENST00000538909 PRR19A6NJB7 356 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 TGFBR3LH3BV60 316 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 J3QW42 95 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 CLDN10P78369 228 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 SETDB1Q15047 1291 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 LCE4AQ5TA78 99 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 ZC3HAV1Q7Z2W4 902 aaKnown RBP4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 ABI1Q8IZP0 508 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 UTP4Q969X6 686 aaKnown RBP4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 BCS1LQ9Y276 419 aa4.85□□□□□ -1.63
CBX3P4-201ENST00000538909 ATAD2Q6PL18 1390 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 WISP1O95388 367 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 IDH3AP50213 366 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 IER5Q5VY09 327 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 RNF43Q68DV7 783 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 ACAD11Q709F0 780 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 NFATC2IPQ8NCF5 419 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 SHKBP1Q8TBC3 707 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 SCG3Q8WXD2 468 aaKnown RBP4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 DBNDD2Q9BQY9 259 aa4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 C2orf49Q9BVC5 232 aaPredicted RBP4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 DMGDHQ9UI17 866 aaKnown RBP4.84□□□□□ -1.63
CBX3P4-201ENST00000538909 RASA1P20936 1047 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 ARID4AP29374 1257 aaPredicted RBP4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 INPP5BP32019 993 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 ATP1A2P50993 1020 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 RTN1Q16799 776 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 GAS2L2Q8NHY3 880 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 ZNF594Q96JF6 807 aaPredicted RBP4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 NSUN5Q96P11 429 aaKnown RBP4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 KLK14Q9P0G3 267 aa4.83□□□□□ -1.64
CBX3P4-201ENST00000538909 LGR5O75473 907 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 HOXA10P31260 410 aaPredicted RBP4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 NRLP54845 237 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 KRTAP5-3Q6L8H2 238 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 CEP41Q9BYV8 373 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 SRA1Q9HD15 236 aaKnown RBP4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 TRIM33Q9UPN9 1127 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 USP20Q9Y2K6 914 aa4.82□□□□□ -1.64
CBX3P4-201ENST00000538909 LOC102724428A0A0B4J2F2 783 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 USP17L3A6NCW0 530 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 USP17L4A6NCW7 530 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 M0R2N6 131 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 GHRHP01286 108 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 ARSDP51689 593 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 SIK1P57059 783 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 TXNDC11Q6PKC3 985 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 USP17L2Q6R6M4 530 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 USP17L1Q7RTZ2 530 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 MAP4K3Q8IVH8 894 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 OGFOD1Q8N543 542 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 GALNT11Q8NCW6 608 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 DCAF11Q8TEB1 546 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 KCNF1Q9H3M0 494 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 ALG2Q9H553 416 aa4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 TLR7Q9NYK1 1049 aaKnown RBP4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 ANGEL1Q9UNK9 670 aaKnown RBP4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 RBM19Q9Y4C8 960 aaKnown RBP4.81□□□□□ -1.64
CBX3P4-201ENST00000538909 PALM3A6NDB9 673 aaPredicted RBP4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 WDR64B1ANS9 1081 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 LINC01387J3KSC0 135 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 CDC25BP30305 580 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 STAG2Q8N3U4 1231 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 POU5F2Q8N7G0 328 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 FAM46AQ96IP4 442 aaKnown RBP4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 KCNK4Q9NYG8 393 aa4.8□□□□□ -1.64
CBX3P4-201ENST00000538909 PSAPP07602 524 aa4.79□□□□□ -1.64
CBX3P4-201ENST00000538909 CD68P34810 354 aaPredicted RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms