RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 TRMT112Q9UI30 125 aaKnown RBP17.91■□□□□ 0.46
ATL3-203ENST00000538786 USP21Q9UK80 565 aa17.91■□□□□ 0.46
ATL3-203ENST00000538786 RREB1Q92766 1687 aa17.91■□□□□ 0.46
ATL3-203ENST00000538786 IFIT5Q13325 482 aaKnown RBP17.9■□□□□ 0.46
ATL3-203ENST00000538786 ANKRD36CQ5JPF3 1778 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 KAT6BQ8WYB5 2073 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 HAUS7Q99871 368 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 ZNF609O15014 1411 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 RFX7Q2KHR2 1363 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 NMIQ13287 307 aaPredicted RBP17.9■□□□□ 0.46
ATL3-203ENST00000538786 SYNE4Q8N205 404 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 PUS3Q9BZE2 481 aaKnown RBP17.9■□□□□ 0.46
ATL3-203ENST00000538786 FOXD4L1Q9NU39 408 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 CEP126Q9P2H0 1117 aa17.9■□□□□ 0.46
ATL3-203ENST00000538786 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
ATL3-203ENST00000538786 IRS4O14654 1257 aaPredicted RBP17.89■□□□□ 0.45
ATL3-203ENST00000538786 CTSWP56202 376 aa17.89■□□□□ 0.45
ATL3-203ENST00000538786 TTLL11Q8NHH1 800 aa17.89■□□□□ 0.45
ATL3-203ENST00000538786 NEUROD6Q96NK8 337 aa17.89■□□□□ 0.45
ATL3-203ENST00000538786 TAF7LQ5H9L4 462 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 FAM227BQ96M60 508 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 CCDC171Q6TFL3 1326 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 TIMM10P62072 90 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 AKAP2Q9Y2D5 859 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 SNX14Q9Y5W7 946 aa17.88■□□□□ 0.45
ATL3-203ENST00000538786 A0A1B0GUL7 405 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 PDE8AO60658 829 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 CAMTA2O94983 1202 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 PTH1RQ03431 593 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 RAB3GAP1Q15042 981 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 AK7Q96M32 723 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 CCDC85AQ96PX6 553 aaPredicted RBP17.87■□□□□ 0.45
ATL3-203ENST00000538786 ZNF831Q5JPB2 1677 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 NUP98P52948 1817 aa17.87■□□□□ 0.45
ATL3-203ENST00000538786 A0A0D9SFI3 127 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 ITGA6P23229 1130 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 TICAM2Q86XR7 235 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 EDC3Q96F86 508 aaKnown RBP17.86■□□□□ 0.45
ATL3-203ENST00000538786 DNAJC2Q99543 621 aaKnown RBP17.86■□□□□ 0.45
ATL3-203ENST00000538786 CWC22Q9HCG8 908 aaKnown RBP17.86■□□□□ 0.45
ATL3-203ENST00000538786 MED23Q9ULK4 1368 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 KCNB2Q92953 911 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 UPF3BQ9BZI7 483 aaKnown RBP17.86■□□□□ 0.45
ATL3-203ENST00000538786 GREM2Q9H772 168 aa17.86■□□□□ 0.45
ATL3-203ENST00000538786 ANKRD18BA2A2Z9 1011 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 MCM4P33991 863 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 PARP10Q53GL7 1025 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 RASEFQ8IZ41 740 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.85■□□□□ 0.45
ATL3-203ENST00000538786 MAP4K1Q92918 833 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 TMX3Q96JJ7 454 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 THSD7AQ9UPZ6 1657 aa17.85■□□□□ 0.45
ATL3-203ENST00000538786 HSPA1LP34931 641 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 NECTIN1Q15223 517 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 SH3TC1Q8TE82 1336 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 SUSD4Q5VX71 490 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 LDHAL6AQ6ZMR3 332 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 KBTBD3Q8NAB2 608 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 TNPO1Q92973 898 aaKnown RBP17.84■□□□□ 0.45
ATL3-203ENST00000538786 UTP14AQ9BVJ6 771 aaKnown RBP17.84■□□□□ 0.45
ATL3-203ENST00000538786 RIPOR2Q9Y4F9 1068 aa17.84■□□□□ 0.45
ATL3-203ENST00000538786 DEKP35659 375 aaKnown RBP17.83■□□□□ 0.44
ATL3-203ENST00000538786 LINC00116Q8NCU8 138 aa17.83■□□□□ 0.44
ATL3-203ENST00000538786 RBM8AQ9Y5S9 174 aaKnown RBP17.83■□□□□ 0.44
ATL3-203ENST00000538786 NDUFB9Q9Y6M9 179 aa17.83■□□□□ 0.44
ATL3-203ENST00000538786 COL5A3P25940 1745 aaPredicted RBP17.82■□□□□ 0.44
ATL3-203ENST00000538786 MEX3CQ5U5Q3 659 aaKnown RBP17.82■□□□□ 0.44
ATL3-203ENST00000538786 PRPF40BQ6NWY9 871 aaKnown RBP17.82■□□□□ 0.44
ATL3-203ENST00000538786 PAG1Q9NWQ8 432 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 ZNF652Q9Y2D9 606 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 RIC1Q4ADV7 1423 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 ZKSCAN1P17029 563 aaPredicted RBP17.82■□□□□ 0.44
ATL3-203ENST00000538786 CUL4AQ13619 759 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 CCDC158Q5M9N0 1113 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 DDX46Q7L014 1031 aaKnown RBP17.82■□□□□ 0.44
ATL3-203ENST00000538786 TM6SF1Q9BZW5 370 aa17.82■□□□□ 0.44
ATL3-203ENST00000538786 CNTNAP4Q9C0A0 1308 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 GOLIM4O00461 696 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 IFIT1P09914 478 aaKnown RBP17.81■□□□□ 0.44
ATL3-203ENST00000538786 KCNJ4P48050 445 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 NUCB2P80303 420 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 METTL24Q5JXM2 366 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 ZNF589Q86UQ0 364 aaPredicted RBP17.81■□□□□ 0.44
ATL3-203ENST00000538786 XAGE2Q96GT9 111 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 GJD4Q96KN9 370 aaPredicted RBP17.81■□□□□ 0.44
ATL3-203ENST00000538786 TTC14Q96N46 770 aa17.81■□□□□ 0.44
ATL3-203ENST00000538786 HSP90B1P14625 803 aaKnown RBP17.8■□□□□ 0.44
ATL3-203ENST00000538786 GORABQ5T7V8 394 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 CREB3L3Q68CJ9 461 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 CLEC4GQ6UXB4 293 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 ZGPATQ8N5A5 531 aaKnown RBP17.8■□□□□ 0.44
ATL3-203ENST00000538786 INTS4Q96HW7 963 aaKnown RBP17.8■□□□□ 0.44
ATL3-203ENST00000538786 GBP4Q96PP9 640 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 CNNM1Q9NRU3 951 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 NIP7Q9Y221 180 aaKnown RBP eCLIP17.8■□□□□ 0.44
ATL3-203ENST00000538786 MYH14Q7Z406 1995 aaKnown RBP17.8■□□□□ 0.44
ATL3-203ENST00000538786 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 RGL2O15211 777 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 TAF5LO75529 589 aa17.8■□□□□ 0.44
ATL3-203ENST00000538786 RNF20Q5VTR2 975 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms