RNA–Protein interactions for RNA: ENST00000538070.1

UBE3B-208, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,655 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-208ENST00000538070 TBC1D2BQ9UPU7 963 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 NUTM2BA6NNL0 878 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 NUTM2EB1AL46 878 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 H3BQV1 296 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 JAK2O60674 1132 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 MBD3O95983 291 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 IFIT1P09914 478 aaKnown RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 PSMA5P28066 241 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 IFFO2Q5TF58 517 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 VPS53Q5VIR6 699 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 NUTM2AQ8IVF1 878 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 HELBQ8NG08 1087 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 SYAP1Q96A49 352 aaPredicted RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 INTS4Q96HW7 963 aaKnown RBP10.38□□□□□ -0.75
UBE3B-208ENST00000538070 ARID3AQ99856 593 aa10.38□□□□□ -0.75
UBE3B-208ENST00000538070 A0A0G2JLW4 131 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 BRF1Q92994 677 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 ACSBG1Q96GR2 724 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 TSPY26PQ9H489 355 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 CEP126Q9P2H0 1117 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 HIP1O00291 1037 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 PI16Q6UXB8 463 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 FAM184AQ8NB25 1140 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 TTC14Q96N46 770 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 ZNF830Q96NB3 372 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-208ENST00000538070 LMTK3Q96Q04 1460 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 F13A1P00488 732 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 APPP05067 770 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 HCLS1P14317 486 aaPredicted RBP10.37□□□□□ -0.75
UBE3B-208ENST00000538070 CCDC173Q0VFZ6 552 aa10.37□□□□□ -0.75
UBE3B-208ENST00000538070 CHD2O14647 1828 aaKnown RBP10.36□□□□□ -0.75
UBE3B-208ENST00000538070 NECTIN1Q15223 517 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 LRSAM1Q6UWE0 723 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 Q6ZUG5 572 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 CDC37L1Q7L3B6 337 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 TTC39AQ5SRH9 613 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 TTLL5Q6EMB2 1281 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 FAM208AQ9UK61 1670 aaKnown RBP10.36□□□□□ -0.75
UBE3B-208ENST00000538070 A0A1B0GUL7 405 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 ADORA1P30542 326 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 DNTTIP2Q5QJE6 756 aaKnown RBP10.36□□□□□ -0.75
UBE3B-208ENST00000538070 KIF6Q6ZMV9 814 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 CKAP2LQ8IYA6 745 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 MAP4K1Q92918 833 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 NCOA5Q9HCD5 579 aaKnown RBP10.36□□□□□ -0.75
UBE3B-208ENST00000538070 USP25Q9UHP3 1055 aa10.36□□□□□ -0.75
UBE3B-208ENST00000538070 NEK1Q96PY6 1258 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 ZSWIM6Q9HCJ5 1215 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 CNNM1Q9NRU3 951 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 PAG1Q9NWQ8 432 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 PCDH11XQ9BZA7 1347 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 PCDH11YQ9BZA8 1340 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 PXDNLA1KZ92 1463 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 TAF5LO75529 589 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 COPRSQ9NQ92 184 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 MST1RQ04912 1400 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 SNAP23O00161 211 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 APOBRQ0VD83 1088 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 BICD2Q8TD16 824 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 ATP6V1DQ9Y5K8 247 aa10.35□□□□□ -0.75
UBE3B-208ENST00000538070 WDR17Q8IZU2 1322 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 ZNF445P59923 1031 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 MCMDC2Q4G0Z9 681 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 METTL24Q5JXM2 366 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 SPC24Q8NBT2 197 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 ZSCAN31Q96LW9 406 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-208ENST00000538070 ISY1Q9ULR0 285 aaKnown RBP10.34□□□□□ -0.75
UBE3B-208ENST00000538070 MTMR6Q9Y217 621 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 NCAPD2Q15021 1401 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 ATP5JP18859 108 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 RPS6KB1P23443 525 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 RFX5P48382 616 aaPredicted RBP10.34□□□□□ -0.75
UBE3B-208ENST00000538070 CLEC17AQ6ZS10 378 aa10.34□□□□□ -0.75
UBE3B-208ENST00000538070 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.34□□□□□ -0.75
UBE3B-208ENST00000538070 TRMT112Q9UI30 125 aaKnown RBP10.34□□□□□ -0.75
UBE3B-208ENST00000538070 RGPD5Q99666 1765 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 IDH1O75874 414 aaKnown RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 CYP21A2P08686 494 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 LDHAL6AQ6ZMR3 332 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 PIGBQ92521 554 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 GPHNQ9NQX3 736 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 TOMM22Q9NS69 142 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 RPAP1Q9BWH6 1393 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 KCNQ4P56696 695 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 FOXO4P98177 505 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 IFIT5Q13325 482 aaKnown RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 HLFQ16534 295 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 CCDC158Q5M9N0 1113 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 BCL11BQ9C0K0 894 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 SH2B1Q9NRF2 756 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 IQSEC3Q9UPP2 1182 aaPredicted RBP10.33□□□□□ -0.76
UBE3B-208ENST00000538070 TNS3Q68CZ2 1445 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 HEG1Q9ULI3 1381 aa10.33□□□□□ -0.76
UBE3B-208ENST00000538070 EYA2O00167 538 aa10.32□□□□□ -0.76
UBE3B-208ENST00000538070 ST3GAL1Q11201 340 aa10.32□□□□□ -0.76
UBE3B-208ENST00000538070 OTUD7BQ6GQQ9 843 aa10.32□□□□□ -0.76
UBE3B-208ENST00000538070 MARF1Q9Y4F3 1742 aaKnown RBP10.32□□□□□ -0.76
UBE3B-208ENST00000538070 PHF14O94880 888 aa10.32□□□□□ -0.76
UBE3B-208ENST00000538070 SPATA32Q96LK8 384 aa10.32□□□□□ -0.76
UBE3B-208ENST00000538070 R3HCC1Q9Y3T6 440 aaKnown RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms