RNA–Protein interactions for RNA: ENST00000537568.1

LMO3-216, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 594 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-216ENST00000537568 CCDC116Q8IYX3 515 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 SLC10A4Q96EP9 437 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 AATKQ6ZMQ8 1374 aa11.61□□□□□ -0.55
LMO3-216ENST00000537568 SBNO1A3KN83 1393 aa11.6□□□□□ -0.55
LMO3-216ENST00000537568 PTK2Q05397 1052 aa11.6□□□□□ -0.55
LMO3-216ENST00000537568 NDUFB9Q9Y6M9 179 aa11.6□□□□□ -0.55
LMO3-216ENST00000537568 MFAP1P55081 439 aaKnown RBP11.59□□□□□ -0.55
LMO3-216ENST00000537568 PDE3BQ13370 1112 aa11.59□□□□□ -0.55
LMO3-216ENST00000537568 MEIOBQ8N635 442 aa11.59□□□□□ -0.55
LMO3-216ENST00000537568 MTMR7Q9Y216 660 aa11.59□□□□□ -0.55
LMO3-216ENST00000537568 PEAK1Q9H792 1746 aa11.59□□□□□ -0.55
LMO3-216ENST00000537568 NAIPQ13075 1403 aa11.59□□□□□ -0.55
LMO3-216ENST00000537568 GRIN3BO60391 1043 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 C6orf118Q5T5N4 469 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 ADAM32Q8TC27 787 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 PBXIP1Q96AQ6 731 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 TRIM34Q9BYJ4 488 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 GPSM3Q9Y4H4 160 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
LMO3-216ENST00000537568 ARHGEF10O15013 1369 aa11.57□□□□□ -0.56
LMO3-216ENST00000537568 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP11.57□□□□□ -0.56
LMO3-216ENST00000537568 SOBPA7XYQ1 873 aa11.57□□□□□ -0.56
LMO3-216ENST00000537568 HSPA1AP0DMV8 641 aaKnown RBP11.57□□□□□ -0.56
LMO3-216ENST00000537568 HSPA1BP0DMV9 641 aaKnown RBP11.57□□□□□ -0.56
LMO3-216ENST00000537568 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
LMO3-216ENST00000537568 RGS22Q8NE09 1264 aa11.57□□□□□ -0.56
LMO3-216ENST00000537568 KCTD15Q96SI1 283 aaPredicted RBP11.57□□□□□ -0.56
LMO3-216ENST00000537568 STK32BQ9NY57 414 aa11.57□□□□□ -0.56
LMO3-216ENST00000537568 NXF1Q9UBU9 619 aaKnown RBP11.57□□□□□ -0.56
LMO3-216ENST00000537568 KIF1AQ12756 1690 aa11.56□□□□□ -0.56
LMO3-216ENST00000537568 PPP1R26Q5T8A7 1209 aaPredicted RBP11.56□□□□□ -0.56
LMO3-216ENST00000537568 PNMA1Q8ND90 353 aa11.56□□□□□ -0.56
LMO3-216ENST00000537568 ADAMTS19Q8TE59 1207 aa11.56□□□□□ -0.56
LMO3-216ENST00000537568 CDV3Q9UKY7 258 aaKnown RBP11.56□□□□□ -0.56
LMO3-216ENST00000537568 E9PCH4 1651 aa11.55□□□□□ -0.56
LMO3-216ENST00000537568 TOMM70O94826 608 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 BMP2P12643 396 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 VEGFBP49765 207 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 TXNRD1Q16881 649 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 WASHC4Q2M389 1173 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 INTS6LQ5JSJ4 861 aaKnown RBP11.54□□□□□ -0.56
LMO3-216ENST00000537568 USP35Q9P2H5 1018 aa11.54□□□□□ -0.56
LMO3-216ENST00000537568 UPP2O95045 317 aa11.53□□□□□ -0.56
LMO3-216ENST00000537568 CSB-PGBD3P0DP91 1061 aa11.53□□□□□ -0.56
LMO3-216ENST00000537568 DAPK1P53355 1430 aa11.52□□□□□ -0.56
LMO3-216ENST00000537568 SBF2Q86WG5 1849 aa11.52□□□□□ -0.57
LMO3-216ENST00000537568 WIPF1O43516 503 aa11.52□□□□□ -0.57
LMO3-216ENST00000537568 VAC14Q08AM6 782 aa11.52□□□□□ -0.57
LMO3-216ENST00000537568 FOXD4L5Q5VV16 416 aaPredicted RBP11.52□□□□□ -0.57
LMO3-216ENST00000537568 FOXD4L4Q8WXT5 416 aaPredicted RBP11.52□□□□□ -0.57
LMO3-216ENST00000537568 COL24A1Q17RW2 1714 aa11.52□□□□□ -0.57
LMO3-216ENST00000537568 NRXN1Q9ULB1 1477 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 PSME1Q06323 249 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 CBLBQ13191 982 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 CFAP70Q5T0N1 1121 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 SLC16A10Q8TF71 515 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 STRN4Q9NRL3 753 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 PGPEP1Q9NXJ5 209 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 CHIC2Q9UKJ5 165 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 FMN2Q9NZ56 1722 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 CRYBG1Q9Y4K1 1723 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 OVOS2A0A0G2JMS6 1433 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 OVOS2A0A0J9YW53 1432 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 OVOS2Q6IE36 1432 aa11.51□□□□□ -0.57
LMO3-216ENST00000537568 PAPPAQ13219 1627 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 PHRF1Q9P1Y6 1649 aaKnown RBP11.5□□□□□ -0.57
LMO3-216ENST00000537568 PATL2C9JE40 543 aaKnown RBP11.5□□□□□ -0.57
LMO3-216ENST00000537568 CHRNA2Q15822 529 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 NBPF20Q3BBV1 942 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 WAPLQ7Z5K2 1190 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 NPAS3Q8IXF0 933 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 TSEN34Q9BSV6 310 aaKnown RBP11.5□□□□□ -0.57
LMO3-216ENST00000537568 PRDM11Q9NQV5 511 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 PLEKHH1Q9ULM0 1364 aa11.5□□□□□ -0.57
LMO3-216ENST00000537568 MAN1A2O60476 641 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 DHX9Q08211 1270 aaKnown RBP11.49□□□□□ -0.57
LMO3-216ENST00000537568 ZNF827Q17R98 1081 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 PPP1R12CQ9BZL4 782 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 USTQ9Y2C2 406 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 ANKRD30AQ9BXX3 1397 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 SSH2Q76I76 1423 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 ATP7BP35670 1465 aa11.49□□□□□ -0.57
LMO3-216ENST00000537568 TNRC18O15417 2968 aaPredicted RBP11.49□□□□□ -0.57
LMO3-216ENST00000537568 CARNS1A5YM72 827 aa11.48□□□□□ -0.57
LMO3-216ENST00000537568 H3BM21 787 aa11.48□□□□□ -0.57
LMO3-216ENST00000537568 ZNF326Q5BKZ1 582 aaKnown RBP11.48□□□□□ -0.57
LMO3-216ENST00000537568 Q6ZVU0 165 aa11.48□□□□□ -0.57
LMO3-216ENST00000537568 DZIP3Q86Y13 1208 aaKnown RBP11.48□□□□□ -0.57
LMO3-216ENST00000537568 DHX57Q6P158 1386 aaKnown RBP11.48□□□□□ -0.57
LMO3-216ENST00000537568 KIAA0232Q92628 1395 aa11.48□□□□□ -0.57
LMO3-216ENST00000537568 TRPM3Q9HCF6 1732 aaPredicted RBP11.48□□□□□ -0.57
LMO3-216ENST00000537568 PARP4Q9UKK3 1724 aaKnown RBP11.47□□□□□ -0.57
LMO3-216ENST00000537568 ALS2Q96Q42 1657 aa11.47□□□□□ -0.57
LMO3-216ENST00000537568 BRD1O95696 1058 aa11.47□□□□□ -0.57
LMO3-216ENST00000537568 RAB15P59190 212 aa11.47□□□□□ -0.57
LMO3-216ENST00000537568 KCNA1Q09470 495 aa11.47□□□□□ -0.57
LMO3-216ENST00000537568 LARP1Q6PKG0 1096 aaKnown RBP11.47□□□□□ -0.57
LMO3-216ENST00000537568 TCP11L2Q8N4U5 519 aa11.47□□□□□ -0.57
LMO3-216ENST00000537568 GPR37L1O60883 481 aa11.46□□□□□ -0.57
LMO3-216ENST00000537568 RBM25P49756 843 aaKnown RBP11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms