RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 PDIA4P13667 645 aaKnown RBP17.05■□□□□ 0.32
USP44-203ENST00000537435 UBE3BQ7Z3V4 1068 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 MPNDQ8N594 471 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 ALDH8A1Q9H2A2 487 aaPredicted RBP17.05■□□□□ 0.32
USP44-203ENST00000537435 C19orf44Q9H6X5 657 aa17.05■□□□□ 0.32
USP44-203ENST00000537435 PDCP20941 246 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 KRT85P78386 507 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 TSGA10IPQ3SY00 556 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 TTC6Q86TZ1 520 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 NDUFB9Q9Y6M9 179 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 SCN11AQ9UI33 1791 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 RABL6Q3YEC7 729 aaPredicted RBP17.04■□□□□ 0.32
USP44-203ENST00000537435 FAM173BQ6P4H8 233 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 UBE2Q2Q8WVN8 375 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 DDX17Q92841 729 aaKnown RBP17.04■□□□□ 0.32
USP44-203ENST00000537435 DCAF5Q96JK2 942 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 FMNL2Q96PY5 1086 aa17.04■□□□□ 0.32
USP44-203ENST00000537435 ATP5J2-PTCD1G3V325 749 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 PTCD1O75127 700 aaKnown RBP17.03■□□□□ 0.32
USP44-203ENST00000537435 KIAA2012Q0VF49 1180 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 STK3Q13188 491 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 KIF1AQ12756 1690 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 COL15A1P39059 1388 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 CYP27B1O15528 508 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 KDM4AO75164 1064 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 USPL1Q5W0Q7 1092 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 KLHL34Q8N239 644 aa17.03■□□□□ 0.32
USP44-203ENST00000537435 A0A087WZG4 1122 aa17.02■□□□□ 0.32
USP44-203ENST00000537435 DNAJC2Q99543 621 aaKnown RBP17.02■□□□□ 0.32
USP44-203ENST00000537435 DBNDD2Q9BQY9 259 aa17.02■□□□□ 0.32
USP44-203ENST00000537435 CHGBP05060 677 aa17.02■□□□□ 0.31
USP44-203ENST00000537435 KRT32Q14532 448 aa17.02■□□□□ 0.31
USP44-203ENST00000537435 ZNF830Q96NB3 372 aaPredicted RBP17.02■□□□□ 0.31
USP44-203ENST00000537435 ALS2Q96Q42 1657 aa17.01■□□□□ 0.31
USP44-203ENST00000537435 CCDC129Q6ZRS4 1044 aa17.01■□□□□ 0.31
USP44-203ENST00000537435 CABLES1Q8TDN4 633 aa17.01■□□□□ 0.31
USP44-203ENST00000537435 CHRNA2Q15822 529 aa17.01■□□□□ 0.31
USP44-203ENST00000537435 SEC62Q99442 399 aaKnown RBP17.01■□□□□ 0.31
USP44-203ENST00000537435 CHMP3Q9Y3E7 222 aa17.01■□□□□ 0.31
USP44-203ENST00000537435 ELP1O95163 1332 aa17■□□□□ 0.31
USP44-203ENST00000537435 PLCB2Q00722 1185 aa17■□□□□ 0.31
USP44-203ENST00000537435 NEK1Q96PY6 1258 aa17■□□□□ 0.31
USP44-203ENST00000537435 ZNF609O15014 1411 aa17■□□□□ 0.31
USP44-203ENST00000537435 UQCRHLA0A096LP55 91 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 UQCRHP07919 91 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 CASP7P55210 303 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 CABP4P57796 275 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 HAUS7Q99871 368 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 RFX7Q2KHR2 1363 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 CCDC192P0DO97 292 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 LIG1P18858 919 aa16.99■□□□□ 0.31
USP44-203ENST00000537435 TTC12Q9H892 705 aaPredicted RBP16.99■□□□□ 0.31
USP44-203ENST00000537435 ATF3P18847 181 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 MCMDC2Q4G0Z9 681 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 LMBR1LQ6UX01 489 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 DDX46Q7L014 1031 aaKnown RBP16.98■□□□□ 0.31
USP44-203ENST00000537435 PLBD2Q8NHP8 589 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 U3KPZ7 1027 aaPredicted RBP16.98■□□□□ 0.31
USP44-203ENST00000537435 ADAMTSL3P82987 1691 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 JAK2O60674 1132 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 GTF3C6Q969F1 213 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 SCAND2PQ9GZW5 306 aaPredicted RBP16.98■□□□□ 0.31
USP44-203ENST00000537435 NUP62CLQ9H1M0 184 aa16.98■□□□□ 0.31
USP44-203ENST00000537435 TFIP11Q9UBB9 837 aaKnown RBP16.98■□□□□ 0.31
USP44-203ENST00000537435 CCDC9Q9Y3X0 531 aaKnown RBP16.98■□□□□ 0.31
USP44-203ENST00000537435 AP5Z1O43299 807 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 CYP21A2P08686 494 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 Q6ZUG5 572 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 SPATA32Q96LK8 384 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 CAMK4Q16566 473 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 MAP3K11Q16584 847 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 SASS6Q6UVJ0 657 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 PIBF1Q8WXW3 757 aa16.97■□□□□ 0.31
USP44-203ENST00000537435 GOLGA6L4A6NEF3 574 aa16.96■□□□□ 0.31
USP44-203ENST00000537435 HSP90B1P14625 803 aaKnown RBP16.96■□□□□ 0.31
USP44-203ENST00000537435 RBM10P98175 930 aaKnown RBP16.96■□□□□ 0.31
USP44-203ENST00000537435 KBTBD3Q8NAB2 608 aa16.96■□□□□ 0.31
USP44-203ENST00000537435 ABCC6O95255 1503 aa16.96■□□□□ 0.31
USP44-203ENST00000537435 LEO1Q8WVC0 666 aaPredicted RBP16.95■□□□□ 0.3
USP44-203ENST00000537435 DACT1Q9NYF0 836 aa16.95■□□□□ 0.3
USP44-203ENST00000537435 COL18A1P39060 1754 aa16.95■□□□□ 0.3
USP44-203ENST00000537435 FOXO4P98177 505 aa16.95■□□□□ 0.3
USP44-203ENST00000537435 DNTTIP2Q5QJE6 756 aaKnown RBP16.95■□□□□ 0.3
USP44-203ENST00000537435 LRRC2Q9BYS8 371 aa16.95■□□□□ 0.3
USP44-203ENST00000537435 AFDNP55196 1824 aaKnown RBP16.95■□□□□ 0.3
USP44-203ENST00000537435 NBPF26B4DH59 902 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 H7C1W4 665 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 TYRO3Q06418 890 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 NOLC1Q14978 699 aaKnown RBP eCLIP16.94■□□□□ 0.3
USP44-203ENST00000537435 NBPF14Q5TI25 921 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 NBPF10Q6P3W6 841 aaKnown RBP16.94■□□□□ 0.3
USP44-203ENST00000537435 NBPF15Q8N660 670 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 BRF1Q92994 677 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 NEUROD6Q96NK8 337 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 PDCL3Q9H2J4 239 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 TNMDQ9H2S6 317 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 ARFGEF2Q9Y6D5 1785 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 PLEKHG2Q9H7P9 1386 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 SH3TC1Q8TE82 1336 aa16.94■□□□□ 0.3
USP44-203ENST00000537435 FAM200AQ8TCP9 573 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms