RNA–Protein interactions for RNA: ENST00000537024.5

SNHG1-203, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 532 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-203ENST00000537024 LORP23490 312 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-203ENST00000537024 LTKP29376 864 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 CLIP1P30622 1438 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 NAA30Q147X3 362 aaPredicted RBP6.29□□□□□ -1.4
SNHG1-203ENST00000537024 CAPN12Q6ZSI9 719 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 GAS2L2Q8NHY3 880 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 PURBQ96QR8 312 aaKnown RBP6.29□□□□□ -1.4
SNHG1-203ENST00000537024 BCL2L13Q9BXK5 485 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 ETNK1Q9HBU6 452 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.29□□□□□ -1.4
SNHG1-203ENST00000537024 PGPEP1Q9NXJ5 209 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 CAMTA1Q9Y6Y1 1673 aa6.29□□□□□ -1.4
SNHG1-203ENST00000537024 CAMSAP2Q08AD1 1489 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 SIAH2O43255 324 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 KCNA6P17658 529 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 MAPK1P28482 360 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 MTMR3Q13615 1198 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 TSPAN10Q9H1Z9 355 aaPredicted RBP6.28□□□□□ -1.4
SNHG1-203ENST00000537024 ERVK-7P63135 1459 aa6.28□□□□□ -1.4
SNHG1-203ENST00000537024 BRWD3Q6RI45 1802 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 TET3O43151 1660 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 PPP1R12BO60237 982 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-203ENST00000537024 LILRA1O75019 489 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 HELQQ8TDG4 1101 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 HPS1Q92902 700 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 MRGPRX2Q96LB1 330 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 SLC4A9Q96Q91 983 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 DCTN4Q9UJW0 460 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 EMILIN1Q9Y6C2 1016 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 MROH1Q8NDA8 1641 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 LRRIQ1Q96JM4 1722 aa6.27□□□□□ -1.41
SNHG1-203ENST00000537024 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.27□□□□□ -1.41
SNHG1-203ENST00000537024 ASXL1Q8IXJ9 1541 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 A6NJY4 79 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 FAM13AO94988 1023 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 EPHA4P54764 986 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 NOM1Q5C9Z4 860 aaKnown RBP6.26□□□□□ -1.41
SNHG1-203ENST00000537024 ZSCAN29Q8IWY8 852 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-203ENST00000537024 GIPC2Q8TF65 315 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 KIFC2Q96AC6 838 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 TRPC5Q9UL62 973 aaPredicted RBP6.26□□□□□ -1.41
SNHG1-203ENST00000537024 CHMP3Q9Y3E7 222 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 PNPLA6Q8IY17 1366 aa6.26□□□□□ -1.41
SNHG1-203ENST00000537024 UNCXA6NJT0 531 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 NR3C2P08235 984 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ZNF16P17020 682 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ADD1P35611 737 aaKnown RBP6.25□□□□□ -1.41
SNHG1-203ENST00000537024 SMTNP53814 917 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ARHGAP4P98171 946 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ZNF326Q5BKZ1 582 aaKnown RBP6.25□□□□□ -1.41
SNHG1-203ENST00000537024 NPAS4Q8IUM7 802 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 SLC9A9Q8IVB4 645 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ASB16Q96NS5 453 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 ARHGEF10LQ9HCE6 1279 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 RAB6BQ9NRW1 208 aa6.25□□□□□ -1.41
SNHG1-203ENST00000537024 SCHIP1Q9P0W5 487 aaPredicted RBP6.25□□□□□ -1.41
SNHG1-203ENST00000537024 CHD2O14647 1828 aaKnown RBP6.25□□□□□ -1.41
SNHG1-203ENST00000537024 NINLQ9Y2I6 1382 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 A0A1W2PRU2 124 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 ALDH1A1P00352 501 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 GMPRP36959 345 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 PSMA6P60900 246 aaKnown RBP6.24□□□□□ -1.41
SNHG1-203ENST00000537024 ECM1Q16610 540 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 TBCELQ5QJ74 424 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 C16orf46Q6P387 395 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 MRRFQ96E11 262 aaKnown RBP6.24□□□□□ -1.41
SNHG1-203ENST00000537024 USP21Q9UK80 565 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 CDK11AQ9UQ88 783 aaPredicted RBP6.24□□□□□ -1.41
SNHG1-203ENST00000537024 WASF2Q9Y6W5 498 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 CHD4Q14839 1912 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.24□□□□□ -1.41
SNHG1-203ENST00000537024 KIAA1107Q9UPP5 1409 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 NCOA3Q9Y6Q9 1424 aa6.24□□□□□ -1.41
SNHG1-203ENST00000537024 GLI3P10071 1580 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 FAM181BA6NEQ2 426 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 ADH1AP07327 375 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 FOXK2Q01167 660 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 R3HDM1Q15032 1099 aaKnown RBP6.23□□□□□ -1.41
SNHG1-203ENST00000537024 MTFR1Q15390 333 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 TLR1Q15399 786 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 BRINP3Q76B58 766 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 STAG2Q8N3U4 1231 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 CNKSR1Q969H4 720 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 XAGE2Q96GT9 111 aa6.23□□□□□ -1.41
SNHG1-203ENST00000537024 C2orf49Q9BVC5 232 aaPredicted RBP6.23□□□□□ -1.41
SNHG1-203ENST00000537024 RALGAPBQ86X10 1494 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 PLEKHH2Q8IVE3 1493 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 ARHGAP35Q9NRY4 1499 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 PIK3C2BO00750 1634 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 DHX29Q7Z478 1369 aaKnown RBP6.22□□□□□ -1.41
SNHG1-203ENST00000537024 TMEM2Q9UHN6 1383 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 CDK2AP1O14519 115 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 NDUFB5O43674 189 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 IL2RAP01589 272 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 NPR3P17342 541 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 MPSTP25325 297 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 NNTQ13423 1086 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 AAMPQ13685 434 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 NBPF15Q8N660 670 aa6.22□□□□□ -1.41
SNHG1-203ENST00000537024 ZSCAN1Q8NBB4 408 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms