RNA–Protein interactions for RNA: ENST00000536805.5

PTCD2-211, Transcript of pentatricopeptide repeat domain 2, humanhuman

TSL 2 BASIC

Gene PTCD2, Length 1,911 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-211ENST00000536805 G3BP1Q13283 466 aaKnown RBP eCLIP14.29□□□□□ -0.12
PTCD2-211ENST00000536805 USHBP1Q8N6Y0 703 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 DDX54Q8TDD1 881 aaKnown RBP14.29□□□□□ -0.12
PTCD2-211ENST00000536805 FSD1Q9BTV5 496 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 LGR6Q9HBX8 967 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 CHMP3Q9Y3E7 222 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 HEG1Q9ULI3 1381 aa14.29□□□□□ -0.12
PTCD2-211ENST00000536805 MYH15Q9Y2K3 1946 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 KCNQ3O43525 872 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 TNNT1P13805 278 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 LRMPQ12912 555 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 USPL1Q5W0Q7 1092 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 ABTB2Q8N961 1025 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 BICD2Q8TD16 824 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 GTF3C6Q969F1 213 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 EAF2Q96CJ1 260 aaPredicted RBP14.28□□□□□ -0.12
PTCD2-211ENST00000536805 ZSCAN16Q9H4T2 348 aaPredicted RBP14.28□□□□□ -0.12
PTCD2-211ENST00000536805 OGFRQ9NZT2 677 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 CGNQ9P2M7 1197 aaKnown RBP14.28□□□□□ -0.12
PTCD2-211ENST00000536805 CLIP2Q9UDT6 1046 aa14.28□□□□□ -0.12
PTCD2-211ENST00000536805 GRM8O00222 908 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 CTAGE5O15320 804 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 DTNBO60941 627 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 NR1I2O75469 434 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 ANXA1P04083 346 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 U2AF2P26368 475 aaKnown RBP eCLIP14.27□□□□□ -0.12
PTCD2-211ENST00000536805 LINS1Q8NG48 757 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 PGBD1Q96JS3 809 aa14.27□□□□□ -0.12
PTCD2-211ENST00000536805 C16orf45Q96MC5 204 aaPredicted RBP14.27□□□□□ -0.12
PTCD2-211ENST00000536805 ZHX1Q9UKY1 873 aaPredicted RBP14.27□□□□□ -0.12
PTCD2-211ENST00000536805 CCDC112Q8NEF3 446 aa14.27□□□□□ -0.13
PTCD2-211ENST00000536805 MRFAP1L1Q96HT8 127 aa14.27□□□□□ -0.13
PTCD2-211ENST00000536805 DNAJC25Q9H1X3 360 aa14.27□□□□□ -0.13
PTCD2-211ENST00000536805 TFIP11Q9UBB9 837 aaKnown RBP14.27□□□□□ -0.13
PTCD2-211ENST00000536805 NRBP1Q9UHY1 535 aa14.27□□□□□ -0.13
PTCD2-211ENST00000536805 CFAP45Q9UL16 551 aa14.27□□□□□ -0.13
PTCD2-211ENST00000536805 COL9A3Q14050 684 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-211ENST00000536805 NUTM2GQ5VZR2 741 aa14.26□□□□□ -0.13
PTCD2-211ENST00000536805 SUCLG2Q96I99 432 aa14.26□□□□□ -0.13
PTCD2-211ENST00000536805 SIPA1L3O60292 1781 aaPredicted RBP14.26□□□□□ -0.13
PTCD2-211ENST00000536805 TAF5LO75529 589 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 RBM6P78332 1123 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 IQCB1Q15051 598 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 PLEKHO1Q53GL0 409 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 NBPF6Q5VWK0 638 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 CACTINQ8WUQ7 758 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 KAZALD1Q96I82 304 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 NBPF4Q96M43 638 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 CTNNA3Q9UI47 895 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 SPDYE4A6NLX3 237 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 DDX58O95786 925 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 STX1AQ16623 288 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 TPD52L1Q16890 204 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 CWF19L2Q2TBE0 894 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 ZNF530Q6P9A1 599 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 BRF1Q92994 677 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 TCEANC2Q96MN5 208 aa14.25□□□□□ -0.13
PTCD2-211ENST00000536805 LLPHQ9BRT6 129 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 CCDC8Q9H0W5 538 aaPredicted RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 BICC1Q9H694 974 aaKnown RBP14.25□□□□□ -0.13
PTCD2-211ENST00000536805 GOLGA6L19H0YKK7 550 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 CCDC144BQ3MJ40 725 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 AMOTQ4VCS5 1084 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 ZNF589Q86UQ0 364 aaPredicted RBP14.24□□□□□ -0.13
PTCD2-211ENST00000536805 CCDC144CPQ8IYA2 1237 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 BOLA2Q9H3K6 86 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 TLR7Q9NYK1 1049 aaKnown RBP14.24□□□□□ -0.13
PTCD2-211ENST00000536805 TAF6LQ9Y6J9 622 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 RGPD2P0DJD1 1756 aa14.24□□□□□ -0.13
PTCD2-211ENST00000536805 RNMTO43148 476 aaKnown RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 GABPB1Q06547 395 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 PROSER3Q2NL68 480 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 CEP135Q66GS9 1140 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 ATL3Q6DD88 541 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 LRRC8AQ8IWT6 810 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 SMARCC2Q8TAQ2 1214 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 NEK1Q96PY6 1258 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 KCND1Q9NSA2 647 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 U3KPZ7 1027 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 PXDNQ92626 1479 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 H3BQV1 296 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 JAK2O60674 1132 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 STK3Q13188 491 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 IFFO2Q5TF58 517 aa14.23□□□□□ -0.13
PTCD2-211ENST00000536805 NAA16Q6N069 864 aaPredicted RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 DDX41Q9UJV9 622 aaKnown RBP14.23□□□□□ -0.13
PTCD2-211ENST00000536805 NYAP1Q6ZVC0 841 aa14.22□□□□□ -0.13
PTCD2-211ENST00000536805 ATP5JP18859 108 aa14.21□□□□□ -0.13
PTCD2-211ENST00000536805 DDX21Q9NR30 783 aaKnown RBP eCLIP14.21□□□□□ -0.13
PTCD2-211ENST00000536805 RCOR1Q9UKL0 485 aa14.21□□□□□ -0.13
PTCD2-211ENST00000536805 PFKFB2O60825 505 aa14.21□□□□□ -0.14
PTCD2-211ENST00000536805 ADD1P35611 737 aaKnown RBP14.21□□□□□ -0.14
PTCD2-211ENST00000536805 C1orf141Q5JVX7 400 aa14.21□□□□□ -0.14
PTCD2-211ENST00000536805 MPRIPQ6WCQ1 1025 aa14.21□□□□□ -0.14
PTCD2-211ENST00000536805 C11orf57Q6ZUT1 292 aaPredicted RBP14.21□□□□□ -0.14
PTCD2-211ENST00000536805 MORC2Q9Y6X9 1032 aaPredicted RBP14.21□□□□□ -0.14
PTCD2-211ENST00000536805 COL15A1P39059 1388 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms