RNA–Protein interactions for RNA: ENST00000536404.6

CHRNB1-202, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNB1, Length 1,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-202ENST00000536404 NPR1P16066 1061 aa14.25□□□□□ -0.13
CHRNB1-202ENST00000536404 MFAP1P55081 439 aaKnown RBP14.25□□□□□ -0.13
CHRNB1-202ENST00000536404 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
CHRNB1-202ENST00000536404 C7orf43Q8WVR3 580 aa14.25□□□□□ -0.13
CHRNB1-202ENST00000536404 BCL2L13Q9BXK5 485 aa14.25□□□□□ -0.13
CHRNB1-202ENST00000536404 GTF2E1P29083 439 aaPredicted RBP14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 BRPF1P55201 1214 aaPredicted RBP14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 HTRA3P83110 453 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 FSTL1Q12841 308 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 ERFEQ4G0M1 354 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 OLFM4Q6UX06 510 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 KIF6Q6ZMV9 814 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 MTERF4Q7Z6M4 381 aaKnown RBP14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 DNAJC5GQ8N7S2 189 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 TAOK3Q9H2K8 898 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 ZBTB3Q9H5J0 574 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 LTBP3Q9NS15 1303 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 TNRC6CQ9HCJ0 1690 aaKnown RBP14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 TIAM2Q8IVF5 1701 aa14.24□□□□□ -0.13
CHRNB1-202ENST00000536404 POTECB2RU33 542 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 TRIM27P14373 513 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 VEGFAP15692 232 aaPredicted RBP14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 EIF2S2P20042 333 aaKnown RBP14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 GPTP24298 496 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 NUTM1Q86Y26 1132 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 NUP98P52948 1817 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 XRCC6P12956 609 aaKnown RBP eCLIP14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 NUCB1Q02818 461 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 PDIA6Q15084 440 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 SMAP1Q8IYB5 467 aaPredicted RBP14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 GCC1Q96CN9 775 aa14.23□□□□□ -0.13
CHRNB1-202ENST00000536404 ABCC12Q96J65 1359 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 DICER1Q9UPY3 1922 aaKnown RBP14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 ANXA1P04083 346 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 TERF1P54274 439 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 PROSER3Q2NL68 480 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 SOGA3Q5TF21 947 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 SUSD4Q5VX71 490 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 LRP10Q7Z4F1 713 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 ZBTB40Q9NUA8 1239 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 UBN2Q6ZU65 1347 aa14.22□□□□□ -0.13
CHRNB1-202ENST00000536404 ARFGEF2Q9Y6D5 1785 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 LMOD3Q0VAK6 560 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 CCDC93Q567U6 631 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 BMP2KLQ5H9B9 411 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 DPY19L2Q6NUT2 758 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 ZNF34Q8IZ26 560 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 SMC1BQ8NDV3 1235 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 SSH1Q8WYL5 1049 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 NECTIN2Q92692 538 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 NYXQ9GZU5 481 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 TNNQ9UQP3 1299 aa14.21□□□□□ -0.13
CHRNB1-202ENST00000536404 ERBB4Q15303 1308 aa14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 DDNO94850 711 aaPredicted RBP14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 KRT24Q2M2I5 525 aa14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 GIGYF2Q6Y7W6 1299 aaKnown RBP14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 ARHGAP45Q92619 1136 aa14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 NOB1Q9ULX3 412 aaKnown RBP14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 TRIM35Q9UPQ4 493 aa14.2□□□□□ -0.14
CHRNB1-202ENST00000536404 GOLGA6L22H0YM25 854 aa14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 ZNF277Q9NRM2 450 aaPredicted RBP14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 CHL1O00533 1208 aa14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 ALDH1B1P30837 517 aa14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 FKBP4Q02790 459 aaKnown RBP eCLIP14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 CRY2Q49AN0 593 aa14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 CHD1LQ86WJ1 897 aa14.19□□□□□ -0.14
CHRNB1-202ENST00000536404 WDR90Q96KV7 1748 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 NTSR2O95665 410 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 DDIT3P35638 169 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 C3orf67Q6ZVT6 689 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 SLC51AQ86UW1 340 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 GRPEL1Q9HAV7 217 aa14.18□□□□□ -0.14
CHRNB1-202ENST00000536404 AIMP1Q12904 312 aaKnown RBP14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 COPS6Q7L5N1 327 aa14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 RTKN2Q8IZC4 609 aa14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 SYNE4Q8N205 404 aa14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 TMEM57Q8N5G2 664 aa14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 XAGE3Q8WTP9 111 aa14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 TSR2Q969E8 191 aaKnown RBP14.17□□□□□ -0.14
CHRNB1-202ENST00000536404 HOXA10P31260 410 aaPredicted RBP14.16□□□□□ -0.14
CHRNB1-202ENST00000536404 RPGRQ92834 1020 aaKnown RBP14.16□□□□□ -0.14
CHRNB1-202ENST00000536404 TRIM44Q96DX7 344 aaPredicted RBP14.16□□□□□ -0.14
CHRNB1-202ENST00000536404 IBTKQ9P2D0 1353 aaPredicted RBP14.16□□□□□ -0.14
CHRNB1-202ENST00000536404 POTEIP0CG38 1075 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 POTEJP0CG39 1038 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 RAB3GAP1Q15042 981 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 PARP10Q53GL7 1025 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 UTP14CQ5TAP6 766 aaKnown RBP14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 PPP1R42Q7Z4L9 355 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 KLRG1Q96E93 195 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 ZNF541Q9H0D2 1346 aa14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 ANP32BQ92688 251 aaKnown RBP14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 UTP14AQ9BVJ6 771 aaKnown RBP14.15□□□□□ -0.14
CHRNB1-202ENST00000536404 IARSP41252 1262 aaKnown RBP14.14□□□□□ -0.15
CHRNB1-202ENST00000536404 RIC1Q4ADV7 1423 aa14.14□□□□□ -0.15
CHRNB1-202ENST00000536404 SPRYD3Q8NCJ5 442 aa14.14□□□□□ -0.15
CHRNB1-202ENST00000536404 RBM17Q96I25 401 aaKnown RBP14.14□□□□□ -0.15
CHRNB1-202ENST00000536404 DDX21Q9NR30 783 aaKnown RBP eCLIP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms