RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 IMPACTQ9P2X3 320 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 TFIP11Q9UBB9 837 aaKnown RBP8.16□□□□□ -1.1
CPSF7-215ENST00000536145 RCOR1Q9UKL0 485 aa8.16□□□□□ -1.1
CPSF7-215ENST00000536145 MRC1P22897 1456 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 USP6P35125 1406 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 ATP8B1O43520 1251 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 PNMA6AP0CW24 399 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-215ENST00000536145 CLCN6P51797 869 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 GSDMDP57764 484 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 TPRNQ4KMQ1 711 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 HSP90AB4PQ58FF6 505 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 HSP90AB2PQ58FF8 381 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-215ENST00000536145 FERMT3Q86UX7 667 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 PIAS4Q8N2W9 510 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-215ENST00000536145 NOL10Q9BSC4 688 aaKnown RBP8.15□□□□□ -1.1
CPSF7-215ENST00000536145 TSPYL1Q9H0U9 437 aa8.15□□□□□ -1.1
CPSF7-215ENST00000536145 FEZ2Q9UHY8 353 aaPredicted RBP8.15□□□□□ -1.1
CPSF7-215ENST00000536145 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.15□□□□□ -1.14e-11■■□□□ 12.6
CPSF7-215ENST00000536145 MYH15Q9Y2K3 1946 aa8.15□□□□□ -1.11
CPSF7-215ENST00000536145 SBNO1A3KN83 1393 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 PSMA5P28066 241 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 ANKRD1Q15327 319 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 BEND3Q5T5X7 828 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 USPL1Q5W0Q7 1092 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 POTEDQ86YR6 584 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 SMARCC2Q8TAQ2 1214 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 EVI5LQ96CN4 794 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 PPP1R13BQ96KQ4 1090 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 GOLPH3LQ9H4A5 285 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 ECHDC1Q9NTX5 307 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 ORC3Q9UBD5 711 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-215ENST00000536145 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.14□□□□□ -1.11
CPSF7-215ENST00000536145 USP16Q9Y5T5 823 aa8.14□□□□□ -1.11
CPSF7-215ENST00000536145 V9GYY5 206 aaPredicted RBP8.14□□□□□ -1.11
CPSF7-215ENST00000536145 AGLP35573 1532 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 PHLPP2Q6ZVD8 1323 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-215ENST00000536145 TADA3O75528 432 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 NMIQ13287 307 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-215ENST00000536145 SNW1Q13573 536 aaKnown RBP8.13□□□□□ -1.11
CPSF7-215ENST00000536145 ERCC6LQ2NKX8 1250 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 ARMCX5Q6P1M9 558 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 IL17REQ8NFR9 667 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 ZNF592Q92610 1267 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 BPIFA3Q9BQP9 254 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 ZSCAN16Q9H4T2 348 aaPredicted RBP8.13□□□□□ -1.11
CPSF7-215ENST00000536145 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 TAF6LQ9Y6J9 622 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 USP54Q70EL1 1684 aa8.13□□□□□ -1.11
CPSF7-215ENST00000536145 NCAPD2Q15021 1401 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 KDM3BQ7LBC6 1761 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 NEDD4P46934 1319 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 VGLL3A8MV65 326 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 GOLGA6L19H0YKK7 550 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 HIP1O00291 1037 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 SRGAP3O43295 1099 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 JAK2O60674 1132 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 ZKSCAN1P17029 563 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 DHX8Q14562 1220 aaKnown RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 ATL3Q6DD88 541 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 NAA16Q6N069 864 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 TRIM65Q6PJ69 517 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 BLOC1S2Q6QNY1 142 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 FILIP1Q7Z7B0 1213 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 IQUBQ8NA54 791 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 CCDC150Q8NCX0 1101 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 BICD2Q8TD16 824 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 DDX54Q8TDD1 881 aaKnown RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 BRF1Q92994 677 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 GTF3C6Q969F1 213 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 FAM227BQ96M60 508 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 EYA1Q99502 592 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 TMX1Q9H3N1 280 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 PHAXQ9H814 394 aaKnown RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 ATG3Q9NT62 314 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 ANO10Q9NW15 660 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 TRMT1Q9NXH9 659 aaKnown RBP8.12□□□□□ -1.11
CPSF7-215ENST00000536145 HMG20BQ9P0W2 317 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 TSPOAP1O95153 1857 aa8.12□□□□□ -1.11
CPSF7-215ENST00000536145 FLT4P35916 1363 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 KIF13AQ9H1H9 1805 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 GOLGA6L4A6NEF3 574 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 ERICH4A6NGS2 130 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 FANCGO15287 622 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 HOXB7P09629 217 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 NBPF7P0C2Y1 421 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-215ENST00000536145 RAD51AP2Q09MP3 1159 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 MLECQ14165 292 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 NCAPHQ15003 741 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 CCAR1Q8IX12 1150 aaKnown RBP8.11□□□□□ -1.11
CPSF7-215ENST00000536145 LLPHQ9BRT6 129 aaKnown RBP8.11□□□□□ -1.11
CPSF7-215ENST00000536145 BCL11BQ9C0K0 894 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-215ENST00000536145 PSD3Q9NYI0 1048 aa8.11□□□□□ -1.11
CPSF7-215ENST00000536145 COL15A1P39059 1388 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 RFX7Q2KHR2 1363 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 CEMIPQ8WUJ3 1361 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 UTYO14607 1347 aa8.1□□□□□ -1.11
CPSF7-215ENST00000536145 ACEP12821 1306 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms