RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CRY2Q49AN0 593 aa19.49■□□□□ 0.71
CNN1-202ENST00000535659 CCDC152Q4G0S7 254 aa19.49■□□□□ 0.71
CNN1-202ENST00000535659 LAMB2P55268 1798 aa19.49■□□□□ 0.71
CNN1-202ENST00000535659 TNRC6CQ9HCJ0 1690 aaKnown RBP19.48■□□□□ 0.71
CNN1-202ENST00000535659 H0YIN7 160 aa19.48■□□□□ 0.71
CNN1-202ENST00000535659 SRGNP10124 158 aa19.47■□□□□ 0.71
CNN1-202ENST00000535659 ATP8B2P98198 1209 aa19.47■□□□□ 0.71
CNN1-202ENST00000535659 C2CD5Q86YS7 1000 aa19.47■□□□□ 0.71
CNN1-202ENST00000535659 RPAP2Q8IXW5 612 aaPredicted RBP19.47■□□□□ 0.71
CNN1-202ENST00000535659 KLHL34Q8N239 644 aa19.47■□□□□ 0.71
CNN1-202ENST00000535659 CCDC85AQ96PX6 553 aaPredicted RBP19.47■□□□□ 0.71
CNN1-202ENST00000535659 MTX1Q13505 466 aa19.46■□□□□ 0.71
CNN1-202ENST00000535659 RPGRQ92834 1020 aaKnown RBP19.46■□□□□ 0.71
CNN1-202ENST00000535659 CHMP3Q9Y3E7 222 aa19.46■□□□□ 0.71
CNN1-202ENST00000535659 NPR1P16066 1061 aa19.46■□□□□ 0.71
CNN1-202ENST00000535659 HOXA10P31260 410 aaPredicted RBP19.46■□□□□ 0.71
CNN1-202ENST00000535659 DDX46Q7L014 1031 aaKnown RBP19.46■□□□□ 0.71
CNN1-202ENST00000535659 MASTLQ96GX5 879 aa19.46■□□□□ 0.71
CNN1-202ENST00000535659 RBM17Q96I25 401 aaKnown RBP19.46■□□□□ 0.71
CNN1-202ENST00000535659 GREM2Q9H772 168 aa19.46■□□□□ 0.71
CNN1-202ENST00000535659 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
CNN1-202ENST00000535659 A0A0G2JLW4 131 aa19.45■□□□□ 0.7
CNN1-202ENST00000535659 CHRNA5P30532 468 aa19.45■□□□□ 0.7
CNN1-202ENST00000535659 CCDC57Q2TAC2 916 aa19.45■□□□□ 0.7
CNN1-202ENST00000535659 CEP85Q6P2H3 762 aa19.45■□□□□ 0.7
CNN1-202ENST00000535659 SRGAP3O43295 1099 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 DPEP1P16444 411 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 ITGA6P23229 1130 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 IFIT5Q13325 482 aaKnown RBP19.44■□□□□ 0.7
CNN1-202ENST00000535659 CRAMP1Q96RY5 1269 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 FHDC1Q9C0D6 1143 aaPredicted RBP19.44■□□□□ 0.7
CNN1-202ENST00000535659 SEC31BQ9NQW1 1179 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 PCDHB15Q9Y5E8 787 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 RTL9Q8NET4 1388 aa19.44■□□□□ 0.7
CNN1-202ENST00000535659 ANKRD18BA2A2Z9 1011 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 KCNA3P22001 575 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 ALDH1B1P30837 517 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 FAM161AQ3B820 660 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 STYK1Q6J9G0 422 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 ZNF622Q969S3 477 aaKnown RBP eCLIP19.43■□□□□ 0.7
CNN1-202ENST00000535659 KIF13BQ9NQT8 1826 aa19.43■□□□□ 0.7
CNN1-202ENST00000535659 PNMA6EA0A0J9YXQ4 647 aa19.42■□□□□ 0.7
CNN1-202ENST00000535659 SIRT2Q8IXJ6 389 aa19.42■□□□□ 0.7
CNN1-202ENST00000535659 RPS8P62241 208 aaKnown RBP19.41■□□□□ 0.7
CNN1-202ENST00000535659 SSH3Q8TE77 659 aa19.41■□□□□ 0.7
CNN1-202ENST00000535659 SYT17Q9BSW7 474 aa19.41■□□□□ 0.7
CNN1-202ENST00000535659 MYH3P11055 1940 aa19.41■□□□□ 0.7
CNN1-202ENST00000535659 RFX5P48382 616 aaPredicted RBP19.41■□□□□ 0.7
CNN1-202ENST00000535659 POLA2Q14181 598 aa19.41■□□□□ 0.7
CNN1-202ENST00000535659 CNKSR1Q969H4 720 aa19.41■□□□□ 0.7
CNN1-202ENST00000535659 CDC5LQ99459 802 aaKnown RBP19.41■□□□□ 0.7
CNN1-202ENST00000535659 COL11A2P13942 1736 aaPredicted RBP19.4■□□□□ 0.7
CNN1-202ENST00000535659 DCAF8L1A6NGE4 600 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 HMMRO75330 724 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 BBOX1O75936 387 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 GRAPQ13588 217 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 ERICH6BQ5W0A0 696 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 NLGN2Q8NFZ4 835 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 GRAPLQ8TC17 118 aaPredicted RBP19.4■□□□□ 0.7
CNN1-202ENST00000535659 CELF1Q92879 486 aaKnown RBP19.4■□□□□ 0.7
CNN1-202ENST00000535659 PIM2Q9P1W9 311 aa19.4■□□□□ 0.7
CNN1-202ENST00000535659 PTPN12Q05209 780 aaKnown RBP19.39■□□□□ 0.69
CNN1-202ENST00000535659 TAF7LQ5H9L4 462 aa19.39■□□□□ 0.69
CNN1-202ENST00000535659 ANKRD18AQ8IVF6 992 aa19.39■□□□□ 0.69
CNN1-202ENST00000535659 ZNF594Q96JF6 807 aaPredicted RBP19.39■□□□□ 0.69
CNN1-202ENST00000535659 IGHMBP2P38935 993 aaKnown RBP19.38■□□□□ 0.69
CNN1-202ENST00000535659 TTLL6Q8N841 843 aa19.38■□□□□ 0.69
CNN1-202ENST00000535659 COPRSQ9NQ92 184 aa19.38■□□□□ 0.69
CNN1-202ENST00000535659 KIAA1551Q9HCM1 1747 aa19.37■□□□□ 0.69
CNN1-202ENST00000535659 LDHAL6AQ6ZMR3 332 aa19.37■□□□□ 0.69
CNN1-202ENST00000535659 KLHDC4Q8TBB5 520 aa19.37■□□□□ 0.69
CNN1-202ENST00000535659 MPHOSPH8Q99549 860 aa19.37■□□□□ 0.69
CNN1-202ENST00000535659 BSDC1Q9NW68 430 aaPredicted RBP19.36■□□□□ 0.69
CNN1-202ENST00000535659 PA2G4Q9UQ80 394 aaKnown RBP19.36■□□□□ 0.69
CNN1-202ENST00000535659 TMC4Q7Z404 712 aa19.35■□□□□ 0.69
CNN1-202ENST00000535659 RWDD1Q9H446 243 aaPredicted RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 COL4A1P02462 1669 aa19.35■□□□□ 0.69
CNN1-202ENST00000535659 SURF6O75683 361 aaKnown RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 HDAC1Q13547 482 aaPredicted RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 DALRD3Q5D0E6 543 aaKnown RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 PRPF40BQ6NWY9 871 aaKnown RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
CNN1-202ENST00000535659 FBXO3Q9UK99 471 aa19.35■□□□□ 0.69
CNN1-202ENST00000535659 EYA2O00167 538 aa19.34■□□□□ 0.69
CNN1-202ENST00000535659 PPEF1O14829 653 aaPredicted RBP19.34■□□□□ 0.69
CNN1-202ENST00000535659 SP8Q8IXZ3 490 aa19.34■□□□□ 0.69
CNN1-202ENST00000535659 SIL1Q9H173 461 aa19.34■□□□□ 0.69
CNN1-202ENST00000535659 CNNM1Q9NRU3 951 aa19.34■□□□□ 0.69
CNN1-202ENST00000535659 NOP58Q9Y2X3 529 aaKnown RBP19.34■□□□□ 0.69
CNN1-202ENST00000535659 DLEC1Q9Y238 1755 aa19.34■□□□□ 0.69
CNN1-202ENST00000535659 GOLGB1Q14789 3259 aaKnown RBP19.33■□□□□ 0.69
CNN1-202ENST00000535659 CIAO1O76071 339 aa19.33■□□□□ 0.68
CNN1-202ENST00000535659 G3BP1Q13283 466 aaKnown RBP eCLIP19.33■□□□□ 0.68
CNN1-202ENST00000535659 ATP6V0A2Q9Y487 856 aa19.33■□□□□ 0.68
CNN1-202ENST00000535659 RIPOR2Q9Y4F9 1068 aa19.33■□□□□ 0.68
CNN1-202ENST00000535659 IGHDP01880 384 aa19.32■□□□□ 0.68
CNN1-202ENST00000535659 LRRC24Q50LG9 513 aa19.32■□□□□ 0.68
CNN1-202ENST00000535659 C7orf43Q8WVR3 580 aa19.32■□□□□ 0.68
CNN1-202ENST00000535659 TMX4Q9H1E5 349 aaPredicted RBP19.32■□□□□ 0.68
CNN1-202ENST00000535659 DCTPP1Q9H773 170 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms