RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 H3BQV1 296 aa15.83■□□□□ 0.12
HDAC4-214ENST00000535493 IFFO2Q5TF58 517 aa15.83■□□□□ 0.12
HDAC4-214ENST00000535493 NPHP3Q7Z494 1330 aa15.83■□□□□ 0.12
HDAC4-214ENST00000535493 USP42Q9H9J4 1324 aaKnown RBP15.83■□□□□ 0.12
HDAC4-214ENST00000535493 PSMA5P28066 241 aa15.82■□□□□ 0.12
HDAC4-214ENST00000535493 ZNF530Q6P9A1 599 aaPredicted RBP15.82■□□□□ 0.12
HDAC4-214ENST00000535493 CCDC112Q8NEF3 446 aa15.82■□□□□ 0.12
HDAC4-214ENST00000535493 KCNB2Q92953 911 aa15.82■□□□□ 0.12
HDAC4-214ENST00000535493 PDCP20941 246 aa15.82■□□□□ 0.12
HDAC4-214ENST00000535493 ELP1O95163 1332 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 MYL6BP14649 208 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 FGD1P98174 961 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 Q6ZUG5 572 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 CTNNA3Q9UI47 895 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 TNRQ92752 1358 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 CCT2P78371 535 aaKnown RBP15.81■□□□□ 0.12
HDAC4-214ENST00000535493 ZNF771Q7L3S4 317 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-214ENST00000535493 CHST3Q7LGC8 479 aa15.81■□□□□ 0.12
HDAC4-214ENST00000535493 DNAJC2Q99543 621 aaKnown RBP15.81■□□□□ 0.12
HDAC4-214ENST00000535493 DDX19AQ9NUU7 478 aaKnown RBP15.81■□□□□ 0.12
HDAC4-214ENST00000535493 DBF4Q9UBU7 674 aaPredicted RBP15.81■□□□□ 0.12
HDAC4-214ENST00000535493 COL15A1P39059 1388 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 A0A0G2JLW4 131 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 SMTNL1A8MU46 457 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 GOLGA6L19H0YKK7 550 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 CEP135Q66GS9 1140 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 TDRD7Q8NHU6 1098 aaKnown RBP15.8■□□□□ 0.12
HDAC4-214ENST00000535493 GTPBP4Q9BZE4 634 aaKnown RBP15.8■□□□□ 0.12
HDAC4-214ENST00000535493 ZNF215Q9UL58 517 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-214ENST00000535493 NPHP4O75161 1426 aaPredicted RBP15.8■□□□□ 0.12
HDAC4-214ENST00000535493 EPHA10Q5JZY3 1008 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 RNF20Q5VTR2 975 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 LRRC8AQ8IWT6 810 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 GOLPH3LQ9H4A5 285 aa15.8■□□□□ 0.12
HDAC4-214ENST00000535493 PXDNLA1KZ92 1463 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 TAF5LO75529 589 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 NCOA5Q9HCD5 579 aaKnown RBP15.79■□□□□ 0.12
HDAC4-214ENST00000535493 GRM8O00222 908 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 SKILP12757 684 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 MTX1Q13505 466 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 KSR2Q6VAB6 950 aa15.79■□□□□ 0.12
HDAC4-214ENST00000535493 SCRN1Q12765 414 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 RESTQ13127 1097 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 ST7Q9NRC1 585 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 BECN2A8MW95 431 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 IQCB1Q15051 598 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 DDX46Q7L014 1031 aaKnown RBP15.78■□□□□ 0.12
HDAC4-214ENST00000535493 CCAR1Q8IX12 1150 aaKnown RBP15.78■□□□□ 0.12
HDAC4-214ENST00000535493 GTF3C6Q969F1 213 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 NALCNQ8IZF0 1738 aa15.78■□□□□ 0.12
HDAC4-214ENST00000535493 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-214ENST00000535493 GIGYF1O75420 1035 aaPredicted RBP15.77■□□□□ 0.12
HDAC4-214ENST00000535493 ERC1Q8IUD2 1116 aa15.77■□□□□ 0.12
HDAC4-214ENST00000535493 FMNL2Q96PY5 1086 aa15.77■□□□□ 0.12
HDAC4-214ENST00000535493 NEK1Q96PY6 1258 aa15.77■□□□□ 0.12
HDAC4-214ENST00000535493 CEMIPQ8WUJ3 1361 aa15.77■□□□□ 0.12
HDAC4-214ENST00000535493 NWD1Q149M9 1564 aa15.77■□□□□ 0.11
HDAC4-214ENST00000535493 CYP21A2P08686 494 aa15.77■□□□□ 0.11
HDAC4-214ENST00000535493 ANKRD1Q15327 319 aa15.77■□□□□ 0.11
HDAC4-214ENST00000535493 RBM43Q6ZSC3 357 aaKnown RBP15.77■□□□□ 0.11
HDAC4-214ENST00000535493 FMN2Q9NZ56 1722 aa15.77■□□□□ 0.11
HDAC4-214ENST00000535493 KMT5BQ4FZB7 885 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 LMOD2Q6P5Q4 547 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 OGFRQ9NZT2 677 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 CCDC69A6NI79 296 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 IGKV5-2P06315 115 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 APOBRQ0VD83 1088 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 ELF2Q15723 593 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 OTUD7BQ6GQQ9 843 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 USP28Q96RU2 1077 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 PODXL2Q9NZ53 605 aa15.76■□□□□ 0.11
HDAC4-214ENST00000535493 CGNQ9P2M7 1197 aaKnown RBP15.76■□□□□ 0.11
HDAC4-214ENST00000535493 ZBTB22O15209 634 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 KCNA6P17658 529 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 PTPN14Q15678 1187 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 RIC3Q7Z5B4 369 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 BABAM1Q9NWV8 329 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 DBNLQ9UJU6 430 aaKnown RBP15.75■□□□□ 0.11
HDAC4-214ENST00000535493 PTPN21Q16825 1174 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 ISM2Q6H9L7 571 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 STOX1Q6ZVD7 989 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 AOPEPQ8N6M6 819 aa15.75■□□□□ 0.11
HDAC4-214ENST00000535493 ME1P48163 572 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 RAB11FIP4Q86YS3 637 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 LRRN4CLQ8ND94 238 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 EID1Q9Y6B2 187 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 BIN1O00499 593 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 ADD1P35611 737 aaKnown RBP15.74■□□□□ 0.11
HDAC4-214ENST00000535493 TFCP2Q12800 502 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 A0A1B0GVL5 298 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 HIP1O00291 1037 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 KIF20AO95235 890 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 SNW1Q13573 536 aaKnown RBP15.74■□□□□ 0.11
HDAC4-214ENST00000535493 KIF18AQ8NI77 898 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 FEZ1Q99689 392 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 DDX41Q9UJV9 622 aaKnown RBP15.74■□□□□ 0.11
HDAC4-214ENST00000535493 PAXBP1Q9Y5B6 917 aa15.74■□□□□ 0.11
HDAC4-214ENST00000535493 PIK3C2AO00443 1686 aa15.73■□□□□ 0.11
HDAC4-214ENST00000535493 MED23Q9ULK4 1368 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms