RNA–Protein interactions for RNA: ENST00000535191.5

NEK4-207, Transcript of NIMA related kinase 4, humanhuman

TSL 2 BASIC

Gene NEK4, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-207ENST00000535191 GJB2P29033 226 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 BLOC1S2Q6QNY1 142 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 TRIM44Q96DX7 344 aaPredicted RBP16.56■□□□□ 0.24
NEK4-207ENST00000535191 NEUROD6Q96NK8 337 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 TMOD3Q9NYL9 352 aa16.56■□□□□ 0.24
NEK4-207ENST00000535191 GLI3P10071 1580 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 TSGA10IPQ3SY00 556 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 LRSAM1Q6UWE0 723 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 TPCN1Q9ULQ1 816 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 CCDC9Q9Y3X0 531 aaKnown RBP16.55■□□□□ 0.24
NEK4-207ENST00000535191 SYCE3A1L190 88 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 GADD45BO75293 160 aaPredicted RBP16.55■□□□□ 0.24
NEK4-207ENST00000535191 IL15P40933 162 aaPredicted RBP16.55■□□□□ 0.24
NEK4-207ENST00000535191 TIMM10P62072 90 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 NECAB1Q8N987 351 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 TAF6LQ9Y6J9 622 aa16.55■□□□□ 0.24
NEK4-207ENST00000535191 COL9A3Q14050 684 aaPredicted RBP16.54■□□□□ 0.24
NEK4-207ENST00000535191 USPL1Q5W0Q7 1092 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 PPP1R9BQ96SB3 815 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 ALDH8A1Q9H2A2 487 aaPredicted RBP16.54■□□□□ 0.24
NEK4-207ENST00000535191 GPR108Q9NPR9 543 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 KCPQ6ZWJ8 1503 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 F13A1P00488 732 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 RPS6KB1P23443 525 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 ANKRD1Q15327 319 aa16.54■□□□□ 0.24
NEK4-207ENST00000535191 ARFGEF2Q9Y6D5 1785 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 KDM4FA0A1W2PPD8 638 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 EYA2O00167 538 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 DTNBO60941 627 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 ST3GAL1Q11201 340 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 TCIRG1Q13488 830 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 MCMDC2Q4G0Z9 681 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 DDX46Q7L014 1031 aaKnown RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 ZNF594Q96JF6 807 aaPredicted RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 ATP6V1DQ9Y5K8 247 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 CHGBP05060 677 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 LRRC24Q50LG9 513 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 KBTBD3Q8NAB2 608 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 SYAP1Q96A49 352 aaPredicted RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 SEC62Q99442 399 aaKnown RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 ISCA1Q9BUE6 129 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 ATG3Q9NT62 314 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 CNPY2Q9Y2B0 182 aa16.53■□□□□ 0.24
NEK4-207ENST00000535191 ZNF330Q9Y3S2 320 aaPredicted RBP16.53■□□□□ 0.24
NEK4-207ENST00000535191 JCADQ9P266 1359 aa16.52■□□□□ 0.24
NEK4-207ENST00000535191 TCEANC2Q96MN5 208 aa16.52■□□□□ 0.24
NEK4-207ENST00000535191 TEX13AQ9BXU3 409 aaPredicted RBP16.52■□□□□ 0.24
NEK4-207ENST00000535191 ASAP1Q9ULH1 1129 aa16.52■□□□□ 0.24
NEK4-207ENST00000535191 TNS2Q63HR2 1409 aa16.52■□□□□ 0.24
NEK4-207ENST00000535191 KRT32Q14532 448 aa16.52■□□□□ 0.23
NEK4-207ENST00000535191 CCDC129Q6ZRS4 1044 aa16.52■□□□□ 0.23
NEK4-207ENST00000535191 PIGBQ92521 554 aa16.52■□□□□ 0.23
NEK4-207ENST00000535191 MTMR6Q9Y217 621 aa16.52■□□□□ 0.23
NEK4-207ENST00000535191 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 U3KPZ7 1027 aaPredicted RBP16.51■□□□□ 0.23
NEK4-207ENST00000535191 ESPNB1AK53 854 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 GOLIM4O00461 696 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 CIAO1O76071 339 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 DNAJC10Q8IXB1 793 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 BTG4Q9NY30 223 aa16.51■□□□□ 0.23
NEK4-207ENST00000535191 TRIM28Q13263 835 aaKnown RBP16.5■□□□□ 0.23
NEK4-207ENST00000535191 TOB2Q14106 344 aaPredicted RBP16.5■□□□□ 0.23
NEK4-207ENST00000535191 VSIG10Q8N0Z9 540 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 PUS3Q9BZE2 481 aaKnown RBP16.5■□□□□ 0.23
NEK4-207ENST00000535191 PAG1Q9NWQ8 432 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 ZNF609O15014 1411 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 UBR2Q8IWV8 1755 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 CLCN1P35523 988 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 LARP1BQ659C4 914 aaKnown RBP16.5■□□□□ 0.23
NEK4-207ENST00000535191 NEK1Q96PY6 1258 aa16.5■□□□□ 0.23
NEK4-207ENST00000535191 STARD3NLO95772 234 aa16.49■□□□□ 0.23
NEK4-207ENST00000535191 CCDC57Q2TAC2 916 aa16.49■□□□□ 0.23
NEK4-207ENST00000535191 CEP126Q9P2H0 1117 aa16.49■□□□□ 0.23
NEK4-207ENST00000535191 PDIA4P13667 645 aaKnown RBP16.48■□□□□ 0.23
NEK4-207ENST00000535191 KIF6Q6ZMV9 814 aa16.48■□□□□ 0.23
NEK4-207ENST00000535191 A0A1B0GUL7 405 aa16.48■□□□□ 0.23
NEK4-207ENST00000535191 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
NEK4-207ENST00000535191 HELLSQ9NRZ9 838 aa16.48■□□□□ 0.23
NEK4-207ENST00000535191 PAPPAQ13219 1627 aa16.48■□□□□ 0.23
NEK4-207ENST00000535191 NHSL1Q5SYE7 1610 aa16.48■□□□□ 0.23
NEK4-207ENST00000535191 CYP21A2P08686 494 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 IFIT1P09914 478 aaKnown RBP16.47■□□□□ 0.23
NEK4-207ENST00000535191 UBE2HP62256 183 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 TICAM2Q86XR7 235 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 FAM89AQ96GI7 184 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 PHF14O94880 888 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 PCCAP05165 728 aaPredicted RBP16.47■□□□□ 0.23
NEK4-207ENST00000535191 DNM1Q05193 864 aaKnown RBP16.47■□□□□ 0.23
NEK4-207ENST00000535191 TSPY26PQ9H489 355 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 SH3TC1Q8TE82 1336 aa16.47■□□□□ 0.23
NEK4-207ENST00000535191 FIBPO43427 364 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 PDCP20941 246 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 SLFNL1Q499Z3 407 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 STK3Q13188 491 aa16.46■□□□□ 0.23
NEK4-207ENST00000535191 CSPP1Q1MSJ5 1256 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms