RNA–Protein interactions for RNA: ENST00000535147.5

DDB1-204, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 2,789 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-204ENST00000535147 LEO1Q8WVC0 666 aaPredicted RBP12.17□□□□□ -0.46
DDB1-204ENST00000535147 ELP1O95163 1332 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.16□□□□□ -0.46
DDB1-204ENST00000535147 HIP1O00291 1037 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 NR1I2O75469 434 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 MYL6BP14649 208 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 CCDC186Q7Z3E2 898 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 SLC39A6Q13433 755 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 LMOD2Q6P5Q4 547 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 PGBD1Q96JS3 809 aa12.16□□□□□ -0.46
DDB1-204ENST00000535147 SCAND2PQ9GZW5 306 aaPredicted RBP12.16□□□□□ -0.46
DDB1-204ENST00000535147 GOLGA6L6A8MZA4 724 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 TAF5LO75529 589 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 CCDC129Q6ZRS4 1044 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 RIC3Q7Z5B4 369 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 DRC7Q8IY82 874 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 BICD2Q8TD16 824 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 LRRC2Q9BYS8 371 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 PRDM4Q9UKN5 801 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 MED23Q9ULK4 1368 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 NPHP3Q7Z494 1330 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 PIP4K2AP48426 406 aaPredicted RBP12.15□□□□□ -0.46
DDB1-204ENST00000535147 PDE4CQ08493 712 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 PDIA6Q15084 440 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 ANKRD1Q15327 319 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 SEC62Q99442 399 aaKnown RBP12.15□□□□□ -0.46
DDB1-204ENST00000535147 SNRKQ9NRH2 765 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 COL15A1P39059 1388 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 NFAT5O94916 1531 aa12.15□□□□□ -0.46
DDB1-204ENST00000535147 FOSBP53539 338 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 CBX1P83916 185 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 CEBPZQ03701 1054 aaKnown RBP12.14□□□□□ -0.47
DDB1-204ENST00000535147 AMOTQ4VCS5 1084 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 BRF1Q92994 677 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 TRIM5Q9C035 493 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 DNAJC25Q9H1X3 360 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 DDX21Q9NR30 783 aaKnown RBP eCLIP12.14□□□□□ -0.47
DDB1-204ENST00000535147 HDAC5Q9UQL6 1122 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 CCDC9Q9Y3X0 531 aaKnown RBP12.14□□□□□ -0.47
DDB1-204ENST00000535147 DDX58O95786 925 aaKnown RBP12.14□□□□□ -0.47
DDB1-204ENST00000535147 PPP4R3BQ5MIZ7 849 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 HEG1Q9ULI3 1381 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 KIF13AQ9H1H9 1805 aa12.14□□□□□ -0.47
DDB1-204ENST00000535147 PPFIA3O75145 1194 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 TPM3P06753 285 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 CHAF1AQ13111 956 aaPredicted RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 ATP2B3Q16720 1220 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 CLSTN2Q9H4D0 955 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 DBNLQ9UJU6 430 aaKnown RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 UTYO14607 1347 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 GCP02774 474 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 ZNF165P49910 485 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 Q6ZUG5 572 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 KCNH5Q8NCM2 988 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 ANKRD24Q8TF21 1146 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 C16orf45Q96MC5 204 aaPredicted RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 MYD88Q99836 296 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 AXIN2Q9Y2T1 843 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 NEURL1BA8MQ27 555 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 HSP90B1P14625 803 aaKnown RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 SMAP1Q8IYB5 467 aaPredicted RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 GTF3C6Q969F1 213 aa12.13□□□□□ -0.47
DDB1-204ENST00000535147 DNAJC2Q99543 621 aaKnown RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 FTOQ9C0B1 505 aaKnown RBP eCLIP12.13□□□□□ -0.47
DDB1-204ENST00000535147 DDX19AQ9NUU7 478 aaKnown RBP12.13□□□□□ -0.47
DDB1-204ENST00000535147 ZNF75DP51815 510 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 GCKRQ14397 625 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 SLFNL1Q499Z3 407 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 COPS6Q7L5N1 327 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 XAGE3Q8WTP9 111 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 NEK1Q96PY6 1258 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 A0A087WWV3 80 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 SPDYE4A6NLX3 237 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 TFCP2Q12800 502 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 RESTQ13127 1097 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
DDB1-204ENST00000535147 HMG20BQ9P0W2 317 aa12.12□□□□□ -0.47
DDB1-204ENST00000535147 LMO7Q8WWI1 1683 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 USP54Q70EL1 1684 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 H3BQV1 296 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 CYP21A2P08686 494 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 NEXNQ0ZGT2 675 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 IFFO2Q5TF58 517 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 ZSCAN25Q6NSZ9 544 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 RBM43Q6ZSC3 357 aaKnown RBP12.11□□□□□ -0.47
DDB1-204ENST00000535147 DDX46Q7L014 1031 aaKnown RBP12.11□□□□□ -0.47
DDB1-204ENST00000535147 ARHGEF25Q86VW2 580 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 ALDH8A1Q9H2A2 487 aaPredicted RBP12.11□□□□□ -0.47
DDB1-204ENST00000535147 CCDC144BQ3MJ40 725 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 TSGA10IPQ3SY00 556 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 PLA2G4DQ86XP0 818 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 CCDC144CPQ8IYA2 1237 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 PDCL2Q8N4E4 241 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 ORAI2Q96SN7 254 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 DBNDD2Q9BQY9 259 aa12.11□□□□□ -0.47
DDB1-204ENST00000535147 CHD2O14647 1828 aaKnown RBP12.1□□□□□ -0.47
DDB1-204ENST00000535147 TNNI3KQ59H18 835 aa12.1□□□□□ -0.47
DDB1-204ENST00000535147 TDRD7Q8NHU6 1098 aaKnown RBP12.1□□□□□ -0.47
DDB1-204ENST00000535147 FPGT-TNNI3KV9GXZ4 949 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms