RNA–Protein interactions for RNA: ENST00000534685.5

CHEK1-217, Transcript of checkpoint kinase 1, humanhuman

TSL 5

Gene CHEK1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-217ENST00000534685 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
CHEK1-217ENST00000534685 DCTN1Q14203 1278 aa11.86□□□□□ -0.51
CHEK1-217ENST00000534685 NBPF10Q6P3W6 841 aaKnown RBP11.86□□□□□ -0.51
CHEK1-217ENST00000534685 NBPF15Q8N660 670 aa11.86□□□□□ -0.51
CHEK1-217ENST00000534685 HACL1Q9UJ83 578 aa11.86□□□□□ -0.51
CHEK1-217ENST00000534685 NPC1L1Q9UHC9 1359 aa11.86□□□□□ -0.51
CHEK1-217ENST00000534685 KLRG2A4D1S0 409 aaPredicted RBP11.85□□□□□ -0.51
CHEK1-217ENST00000534685 ITGBL1O95965 494 aaPredicted RBP11.85□□□□□ -0.51
CHEK1-217ENST00000534685 EPHX2P34913 555 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 RTKN2Q8IZC4 609 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 SYNE4Q8N205 404 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 NUDCQ9Y266 331 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 SLX4Q8IY92 1834 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 RNF123Q5XPI4 1314 aa11.85□□□□□ -0.51
CHEK1-217ENST00000534685 IARSP41252 1262 aaKnown RBP11.84□□□□□ -0.51
CHEK1-217ENST00000534685 CTCFP49711 727 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-217ENST00000534685 HLFQ16534 295 aa11.84□□□□□ -0.51
CHEK1-217ENST00000534685 MAP1SQ66K74 1059 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-217ENST00000534685 NGEFQ8N5V2 710 aa11.84□□□□□ -0.51
CHEK1-217ENST00000534685 FER1L6Q2WGJ9 1857 aa11.84□□□□□ -0.51
CHEK1-217ENST00000534685 CNTROBQ8N137 903 aa11.83□□□□□ -0.52
CHEK1-217ENST00000534685 PRDM10Q9NQV6 1147 aa11.83□□□□□ -0.52
CHEK1-217ENST00000534685 MIS18AQ9NYP9 233 aa11.83□□□□□ -0.52
CHEK1-217ENST00000534685 CCDC88AQ3V6T2 1871 aa11.83□□□□□ -0.52
CHEK1-217ENST00000534685 FZD9O00144 591 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 ALDH1B1P30837 517 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 LBX1P52954 281 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 PNMA8AQ86V59 439 aaPredicted RBP11.82□□□□□ -0.52
CHEK1-217ENST00000534685 NUTM1Q86Y26 1132 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 JDP2Q8WYK2 163 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 WBP1LQ9NX94 342 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 GJA3Q9Y6H8 435 aa11.82□□□□□ -0.52
CHEK1-217ENST00000534685 VIRMAQ69YN4 1812 aaKnown RBP11.81□□□□□ -0.52
CHEK1-217ENST00000534685 ABCC12Q96J65 1359 aa11.81□□□□□ -0.52
CHEK1-217ENST00000534685 DEFB115Q30KQ5 88 aa11.81□□□□□ -0.52
CHEK1-217ENST00000534685 GPC2Q8N158 579 aa11.81□□□□□ -0.52
CHEK1-217ENST00000534685 ABT1Q9ULW3 272 aaKnown RBP11.81□□□□□ -0.52
CHEK1-217ENST00000534685 SIPA1L3O60292 1781 aaPredicted RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 RASSF10A6NK89 507 aa11.8□□□□□ -0.52
CHEK1-217ENST00000534685 TCERG1O14776 1098 aaKnown RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 RGL2O15211 777 aa11.8□□□□□ -0.52
CHEK1-217ENST00000534685 PPP2R1AP30153 589 aa11.8□□□□□ -0.52
CHEK1-217ENST00000534685 EIF6P56537 245 aaKnown RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 TAF7Q15545 349 aaPredicted RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 SLC51AQ86UW1 340 aa11.8□□□□□ -0.52
CHEK1-217ENST00000534685 RPGRQ92834 1020 aaKnown RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 PSMD1Q99460 953 aa11.8□□□□□ -0.52
CHEK1-217ENST00000534685 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
CHEK1-217ENST00000534685 BCORQ6W2J9 1755 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 HTATSF1O43719 755 aaKnown RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 HSPA8P11142 646 aaKnown RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 GPTP24298 496 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 LMOD1P29536 600 aaPredicted RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 PBX2P40425 430 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 FMR1Q06787 632 aaKnown RBP eCLIP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 CRY2Q49AN0 593 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 TTLL7Q6ZT98 887 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 PAXIP1Q6ZW49 1069 aaPredicted RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
CHEK1-217ENST00000534685 DICER1Q9UPY3 1922 aaKnown RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 WDR33Q9C0J8 1336 aaKnown RBP11.79□□□□□ -0.52
CHEK1-217ENST00000534685 C2orf72A6NCS6 295 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 SLC34A2O95436 690 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 NUDT7P0C024 238 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 MYL6BP14649 208 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 EPS15P42566 896 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 GRM1Q13255 1194 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 KIF6Q6ZMV9 814 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 LARGE2Q8N3Y3 721 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 MFRPQ9BY79 579 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 ZBTB3Q9H5J0 574 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 DDX21Q9NR30 783 aaKnown RBP eCLIP11.78□□□□□ -0.52
CHEK1-217ENST00000534685 MAP3K15Q6ZN16 1313 aa11.78□□□□□ -0.52
CHEK1-217ENST00000534685 ERVV-1B6SEH8 477 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 PPEF1O14829 653 aaPredicted RBP11.77□□□□□ -0.53
CHEK1-217ENST00000534685 MAP2K1Q02750 393 aaPredicted RBP11.77□□□□□ -0.53
CHEK1-217ENST00000534685 SUSD4Q5VX71 490 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 CC2D2BQ6DHV5 1058 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 LHX6Q9UPM6 363 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 UBN2Q6ZU65 1347 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 SNED1Q8TER0 1413 aa11.77□□□□□ -0.53
CHEK1-217ENST00000534685 TRAF5O00463 557 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 HOXA10P31260 410 aaPredicted RBP11.76□□□□□ -0.53
CHEK1-217ENST00000534685 SCNN1DP51172 638 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 NIM1KQ8IY84 436 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 PNISRQ8TF01 805 aaKnown RBP11.76□□□□□ -0.53
CHEK1-217ENST00000534685 ABHD8Q96I13 439 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
CHEK1-217ENST00000534685 CAPNS2Q96L46 248 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 THUMPD2Q9BTF0 503 aaKnown RBP11.76□□□□□ -0.53
CHEK1-217ENST00000534685 ARFGEF2Q9Y6D5 1785 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 SCN4AP35499 1836 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 CACNA1SQ13698 1873 aa11.76□□□□□ -0.53
CHEK1-217ENST00000534685 COL4A5P29400 1685 aa11.75□□□□□ -0.53
CHEK1-217ENST00000534685 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
CHEK1-217ENST00000534685 NEFMP07197 916 aa11.75□□□□□ -0.53
CHEK1-217ENST00000534685 EIF4A1P60842 406 aaKnown RBP11.75□□□□□ -0.53
CHEK1-217ENST00000534685 CYP4F22Q6NT55 531 aa11.75□□□□□ -0.53
CHEK1-217ENST00000534685 NTSR2O95665 410 aa11.74□□□□□ -0.53
CHEK1-217ENST00000534685 AOC3Q16853 763 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms