RNA–Protein interactions for RNA: ENST00000534669.1

GEN1-207, Transcript of GEN1, Holliday junction 5' flap endonuclease, humanhuman

TSL 2

Gene GEN1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GEN1-207ENST00000534669 EAPPQ56P03 285 aaPredicted RBP9.56□□□□□ -0.88
GEN1-207ENST00000534669 LDHDQ86WU2 507 aa9.56□□□□□ -0.88
GEN1-207ENST00000534669 RNF123Q5XPI4 1314 aa9.56□□□□□ -0.88
GEN1-207ENST00000534669 NPR1P16066 1061 aa9.55□□□□□ -0.88
GEN1-207ENST00000534669 MAP1SQ66K74 1059 aaPredicted RBP9.55□□□□□ -0.88
GEN1-207ENST00000534669 MIS18AQ9NYP9 233 aa9.55□□□□□ -0.88
GEN1-207ENST00000534669 NIP7Q9Y221 180 aaKnown RBP eCLIP9.55□□□□□ -0.88
GEN1-207ENST00000534669 THSD7BQ9C0I4 1608 aa9.55□□□□□ -0.88
GEN1-207ENST00000534669 IQCA1LA6NCM1 817 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 C2orf72A6NCS6 295 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 TMEM88BA6NKF7 163 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 FZD9O00144 591 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 SNRPA1P09661 255 aaKnown RBP9.54□□□□□ -0.88
GEN1-207ENST00000534669 EPHX2P34913 555 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 SOGA3Q5TF21 947 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 CLEC4GQ6UXB4 293 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 NUTM1Q86Y26 1132 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 SYNE4Q8N205 404 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 TMC2Q8TDI7 906 aa9.54□□□□□ -0.88
GEN1-207ENST00000534669 TRPM7Q96QT4 1865 aa9.53□□□□□ -0.88
GEN1-207ENST00000534669 IARSP41252 1262 aaKnown RBP9.53□□□□□ -0.88
GEN1-207ENST00000534669 LBX1P52954 281 aa9.53□□□□□ -0.88
GEN1-207ENST00000534669 WBP1LQ9NX94 342 aa9.53□□□□□ -0.88
GEN1-207ENST00000534669 HACL1Q9UJ83 578 aa9.53□□□□□ -0.88
GEN1-207ENST00000534669 UBN2Q6ZU65 1347 aa9.53□□□□□ -0.88
GEN1-207ENST00000534669 LAMB2P55268 1798 aa9.52□□□□□ -0.88
GEN1-207ENST00000534669 U2AF1L5P0DN76 240 aaPredicted RBP9.52□□□□□ -0.89
GEN1-207ENST00000534669 HSPA8P11142 646 aaKnown RBP9.52□□□□□ -0.89
GEN1-207ENST00000534669 TAF1P21675 1872 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 U2AF1Q01081 240 aaKnown RBP eCLIP9.52□□□□□ -0.89
GEN1-207ENST00000534669 CRY2Q49AN0 593 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 TPTE2Q6XPS3 522 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 TTLL7Q6ZT98 887 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 NPM2Q86SE8 214 aaKnown RBP9.52□□□□□ -0.89
GEN1-207ENST00000534669 CNTROBQ8N137 903 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 NGEFQ8N5V2 710 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 PRDM10Q9NQV6 1147 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 ZNF652Q9Y2D9 606 aa9.52□□□□□ -0.89
GEN1-207ENST00000534669 RASSF10A6NK89 507 aa9.51□□□□□ -0.89
GEN1-207ENST00000534669 CTCFP49711 727 aaPredicted RBP9.51□□□□□ -0.89
GEN1-207ENST00000534669 RTKN2Q8IZC4 609 aa9.51□□□□□ -0.89
GEN1-207ENST00000534669 THUMPD2Q9BTF0 503 aaKnown RBP9.51□□□□□ -0.89
GEN1-207ENST00000534669 RIC1Q4ADV7 1423 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 TRAF5O00463 557 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 TCERG1O14776 1098 aaKnown RBP9.5□□□□□ -0.89
GEN1-207ENST00000534669 GPTP24298 496 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 EPS15P42566 896 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 SCNN1DP51172 638 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 SUSD4Q5VX71 490 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 GPR153Q6NV75 609 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 GPC2Q8N158 579 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 RTF1Q92541 710 aaKnown RBP9.5□□□□□ -0.89
GEN1-207ENST00000534669 PLSCR2Q9NRY7 297 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 GJA3Q9Y6H8 435 aa9.5□□□□□ -0.89
GEN1-207ENST00000534669 WDR33Q9C0J8 1336 aaKnown RBP9.5□□□□□ -0.89
GEN1-207ENST00000534669 FAM205CA6NFA0 338 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 ZEB1P37275 1124 aaPredicted RBP9.49□□□□□ -0.89
GEN1-207ENST00000534669 TAF7Q15545 349 aaPredicted RBP9.49□□□□□ -0.89
GEN1-207ENST00000534669 DEFB115Q30KQ5 88 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 AIDAQ96BJ3 306 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 CFAP53Q96M91 514 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 HS3ST6Q96QI5 342 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 PSMD1Q99460 953 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 ZBTB3Q9H5J0 574 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 DDX21Q9NR30 783 aaKnown RBP eCLIP9.49□□□□□ -0.89
GEN1-207ENST00000534669 ANKRD36CQ5JPF3 1778 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 MAP3K15Q6ZN16 1313 aa9.49□□□□□ -0.89
GEN1-207ENST00000534669 COL4A1P02462 1669 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 SLC34A2O95436 690 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 NTSR2O95665 410 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 MYL6BP14649 208 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 ALDH1B1P30837 517 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 HOXA10P31260 410 aaPredicted RBP9.48□□□□□ -0.89
GEN1-207ENST00000534669 CST9Q5W186 159 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 CYP4F22Q6NT55 531 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 PNMA8AQ86V59 439 aaPredicted RBP9.48□□□□□ -0.89
GEN1-207ENST00000534669 ABHD8Q96I13 439 aa9.48□□□□□ -0.89
GEN1-207ENST00000534669 ABT1Q9ULW3 272 aaKnown RBP9.48□□□□□ -0.89
GEN1-207ENST00000534669 RRP7AQ9Y3A4 280 aaKnown RBP9.48□□□□□ -0.89
GEN1-207ENST00000534669 CASP8AP2Q9UKL3 1982 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 HTATSF1O43719 755 aaKnown RBP9.47□□□□□ -0.89
GEN1-207ENST00000534669 GTPBP6O43824 516 aaPredicted RBP9.47□□□□□ -0.89
GEN1-207ENST00000534669 GTF2E1P29083 439 aaPredicted RBP9.47□□□□□ -0.89
GEN1-207ENST00000534669 EIF4A1P60842 406 aaKnown RBP9.47□□□□□ -0.89
GEN1-207ENST00000534669 LRP10Q7Z4F1 713 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 ZNF34Q8IZ26 560 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 PLEKHF1Q96S99 279 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 TSKSQ9UJT2 592 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 NUDCQ9Y266 331 aa9.47□□□□□ -0.89
GEN1-207ENST00000534669 IBTKQ9P2D0 1353 aaPredicted RBP9.47□□□□□ -0.89
GEN1-207ENST00000534669 DUOX1Q9NRD9 1551 aa9.46□□□□□ -0.89
GEN1-207ENST00000534669 ERVV-1B6SEH8 477 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 PPEF1O14829 653 aaPredicted RBP9.46□□□□□ -0.9
GEN1-207ENST00000534669 AOC2O75106 756 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 ANXA1P04083 346 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 EIF6P56537 245 aaKnown RBP9.46□□□□□ -0.9
GEN1-207ENST00000534669 GRM1Q13255 1194 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 AOC3Q16853 763 aa9.46□□□□□ -0.9
GEN1-207ENST00000534669 PROSER3Q2NL68 480 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms