RNA–Protein interactions for RNA: ENST00000534320.5

PHRF1-206, Transcript of PHD and ring finger domains 1, humanhuman

TSL 5

Gene PHRF1, Length 5,178 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-206ENST00000534320 UBE2HP62256 183 aa20.01■□□□□ 0.79
PHRF1-206ENST00000534320 ORC3Q9UBD5 711 aaPredicted RBP20.01■□□□□ 0.79
PHRF1-206ENST00000534320 TFCP2Q12800 502 aa20.01■□□□□ 0.79
PHRF1-206ENST00000534320 PAG1Q9NWQ8 432 aa20.01■□□□□ 0.79
PHRF1-206ENST00000534320 CKAP2LQ8IYA6 745 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 RBM27Q9P2N5 1060 aaKnown RBP20■□□□□ 0.79
PHRF1-206ENST00000534320 GOLGA6L7A0A1B0GV03 622 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 CTAGE5O15320 804 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 CCDC112Q8NEF3 446 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 ARAP3Q8WWN8 1544 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 AATKQ6ZMQ8 1374 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 IARSP41252 1262 aaKnown RBP20■□□□□ 0.79
PHRF1-206ENST00000534320 MFSD6Q6ZSS7 791 aa20■□□□□ 0.79
PHRF1-206ENST00000534320 PLEKHG1Q9ULL1 1385 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 ATP7BP35670 1465 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 PPP1R1BQ9UD71 204 aaPredicted RBP19.99■□□□□ 0.79
PHRF1-206ENST00000534320 ZNF521Q96K83 1311 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 ABCC3O15438 1527 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 RBM25P49756 843 aaKnown RBP19.99■□□□□ 0.79
PHRF1-206ENST00000534320 ZNF444Q8N0Y2 327 aaPredicted RBP19.99■□□□□ 0.79
PHRF1-206ENST00000534320 CATIPQ7Z7H3 387 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 MICU3Q86XE3 530 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 FSIP1Q8NA03 581 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 LRRC2Q9BYS8 371 aa19.99■□□□□ 0.79
PHRF1-206ENST00000534320 DZIP3Q86Y13 1208 aaKnown RBP19.98■□□□□ 0.79
PHRF1-206ENST00000534320 ABCC4O15439 1325 aa19.98■□□□□ 0.79
PHRF1-206ENST00000534320 METAP2P50579 478 aaKnown RBP eCLIP19.98■□□□□ 0.791e-7■□□□□ 11.3
PHRF1-206ENST00000534320 CAGE1Q8TC20 777 aa19.98■□□□□ 0.79
PHRF1-206ENST00000534320 SMARCC1Q92922 1105 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-206ENST00000534320 METTL22Q9BUU2 404 aaPredicted RBP19.98■□□□□ 0.79
PHRF1-206ENST00000534320 ZNHIT6Q9NWK9 470 aaKnown RBP19.98■□□□□ 0.79
PHRF1-206ENST00000534320 PPFIA3O75145 1194 aa19.98■□□□□ 0.79
PHRF1-206ENST00000534320 SLC52A2Q9HAB3 445 aa19.98■□□□□ 0.79
PHRF1-206ENST00000534320 KIF24Q5T7B8 1368 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 NBPF5PQ86XG9 351 aaPredicted RBP19.97■□□□□ 0.79
PHRF1-206ENST00000534320 RAB11FIP4Q86YS3 637 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 CCDC144CPQ8IYA2 1237 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 ZSCAN23Q3MJ62 389 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 ZSCAN16Q9H4T2 348 aaPredicted RBP19.97■□□□□ 0.79
PHRF1-206ENST00000534320 EIF4A1P60842 406 aaKnown RBP19.97■□□□□ 0.79
PHRF1-206ENST00000534320 RAB3GAP1Q15042 981 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 SEC63Q9UGP8 760 aaKnown RBP19.97■□□□□ 0.79
PHRF1-206ENST00000534320 MYO6Q9UM54 1294 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 EIF3JO75822 258 aaKnown RBP19.97■□□□□ 0.79
PHRF1-206ENST00000534320 ANKRD18AQ8IVF6 992 aa19.97■□□□□ 0.79
PHRF1-206ENST00000534320 CLASP1Q7Z460 1538 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 KLF18A0A0U1RQI7 1052 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 PLBD2Q8NHP8 589 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 ZHX3Q9H4I2 956 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 RFC4P35249 363 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 ZRSR2Q15696 482 aaKnown RBP19.96■□□□□ 0.79
PHRF1-206ENST00000534320 Q6ZUG5 572 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 USP25Q9UHP3 1055 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 NIP7Q9Y221 180 aaKnown RBP eCLIP19.96■□□□□ 0.79
PHRF1-206ENST00000534320 PNMA6EA0A0J9YXQ4 647 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 AK2P54819 239 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 RAD50Q92878 1312 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 UNC13BO14795 1591 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 MPHOSPH10O00566 681 aaKnown RBP19.96■□□□□ 0.79
PHRF1-206ENST00000534320 TOM1O60784 492 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 CFAP100Q494V2 611 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 SLC9C2Q5TAH2 1124 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 CREB3L3Q68CJ9 461 aa19.96■□□□□ 0.79
PHRF1-206ENST00000534320 UTP14AQ9BVJ6 771 aaKnown RBP19.96■□□□□ 0.79
PHRF1-206ENST00000534320 SLF2Q8IX21 1173 aa19.95■□□□□ 0.78
PHRF1-206ENST00000534320 PDCL3Q9H2J4 239 aa19.95■□□□□ 0.78
PHRF1-206ENST00000534320 BMP2KQ9NSY1 1161 aaPredicted RBP19.95■□□□□ 0.78
PHRF1-206ENST00000534320 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
PHRF1-206ENST00000534320 INCENPQ9NQS7 918 aa19.95■□□□□ 0.78
PHRF1-206ENST00000534320 BTG4Q9NY30 223 aa19.95■□□□□ 0.78
PHRF1-206ENST00000534320 LDHCP07864 332 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 NBPF7P0C2Y1 421 aaPredicted RBP19.94■□□□□ 0.78
PHRF1-206ENST00000534320 TRPM1Q7Z4N2 1603 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 RNF113AO15541 343 aaKnown RBP19.94■□□□□ 0.78
PHRF1-206ENST00000534320 SSBP05455 408 aaKnown RBP eCLIP19.94■□□□□ 0.78
PHRF1-206ENST00000534320 TMOD2Q9NZR1 351 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 CNPY2Q9Y2B0 182 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 ERLIN1O75477 346 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 ZGPATQ8N5A5 531 aaKnown RBP19.94■□□□□ 0.78
PHRF1-206ENST00000534320 IL17REQ8NFR9 667 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 C6orf229H3BNL8 230 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 GIMAP7Q8NHV1 300 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 CLTCL1P53675 1640 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 AOX1Q06278 1338 aa19.94■□□□□ 0.78
PHRF1-206ENST00000534320 SPTY2D1Q68D10 685 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-206ENST00000534320 CRACR2BQ8N4Y2 399 aaPredicted RBP19.93■□□□□ 0.78
PHRF1-206ENST00000534320 DYDC1Q8WWB3 177 aa19.93■□□□□ 0.78
PHRF1-206ENST00000534320 INTS4Q96HW7 963 aaKnown RBP19.93■□□□□ 0.78
PHRF1-206ENST00000534320 CROCC2H7BZ55 1655 aa19.93■□□□□ 0.78
PHRF1-206ENST00000534320 F13A1P00488 732 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 PDE4BQ07343 736 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 USP48Q86UV5 1035 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 SETDB2Q96T68 719 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 SLC26A6Q9BXS9 759 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 ROBO2Q9HCK4 1378 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 CYP7A1P22680 504 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 NLRP5P59047 1200 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 BAG3O95817 575 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 KRT23Q9C075 422 aa19.92■□□□□ 0.78
PHRF1-206ENST00000534320 IQSEC3Q9UPP2 1182 aaPredicted RBP19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms