RNA–Protein interactions for RNA: ENST00000534290.1

NCAPD3-212, Transcript of non-SMC condensin II complex subunit D3, humanhuman

TSL 2

Gene NCAPD3, Length 352 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAPD3-212ENST00000534290 L3MBTL3Q96JM7 780 aaPredicted RBP13.3□□□□□ -0.28
NCAPD3-212ENST00000534290 NIP7Q9Y221 180 aaKnown RBP eCLIP13.3□□□□□ -0.28
NCAPD3-212ENST00000534290 SLX4Q8IY92 1834 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 CACNA1FO60840 1977 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 FAM177BA6PVY3 158 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 FKBP4Q02790 459 aaKnown RBP eCLIP13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 OLFM4Q6UX06 510 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 RTKN2Q8IZC4 609 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 CLEC11AQ9Y240 323 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 PASKQ96RG2 1323 aa13.29□□□□□ -0.28
NCAPD3-212ENST00000534290 SCN7AQ01118 1682 aa13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 COL11A2P13942 1736 aaPredicted RBP13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 RGL2O15211 777 aa13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 ITGBL1O95965 494 aaPredicted RBP13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 SLC4A2P04920 1241 aa13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 GTF2E1P29083 439 aaPredicted RBP13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 ALDH1B1P30837 517 aa13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 EAPPQ56P03 285 aaPredicted RBP13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 HDAC5Q9UQL6 1122 aa13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 DICER1Q9UPY3 1922 aaKnown RBP13.28□□□□□ -0.28
NCAPD3-212ENST00000534290 SIPA1L3O60292 1781 aaPredicted RBP13.27□□□□□ -0.28
NCAPD3-212ENST00000534290 TMEM88BA6NKF7 163 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 FOXN1O15353 648 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 HLFQ16534 295 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 ANKRD45Q5TZF3 282 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 SYNE4Q8N205 404 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 HACL1Q9UJ83 578 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 CNTNAP1P78357 1384 aa13.27□□□□□ -0.29
NCAPD3-212ENST00000534290 GNAI3P08754 354 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 HOXB7P09629 217 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 EPHX2P34913 555 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 VEGFBP49765 207 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 ZNF541Q9H0D2 1346 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 MIS18AQ9NYP9 233 aa13.26□□□□□ -0.29
NCAPD3-212ENST00000534290 FZD9O00144 591 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 IARSP41252 1262 aaKnown RBP13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 BMP2KLQ5H9B9 411 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 CASC1Q6TDU7 716 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 PNMA8AQ86V59 439 aaPredicted RBP13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 SKAP1Q86WV1 359 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 CNTROBQ8N137 903 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 AIDAQ96BJ3 306 aa13.25□□□□□ -0.29
NCAPD3-212ENST00000534290 MAP1SQ66K74 1059 aaPredicted RBP13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 GPC2Q8N158 579 aa13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 ANKRD44Q8N8A2 993 aa13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 JDP2Q8WYK2 163 aa13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 DCTPP1Q9H773 170 aa13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 PRDM10Q9NQV6 1147 aa13.24□□□□□ -0.29
NCAPD3-212ENST00000534290 CTCFP49711 727 aaPredicted RBP13.23□□□□□ -0.29
NCAPD3-212ENST00000534290 DEFB115Q30KQ5 88 aa13.23□□□□□ -0.29
NCAPD3-212ENST00000534290 NUTM1Q86Y26 1132 aa13.23□□□□□ -0.29
NCAPD3-212ENST00000534290 NYXQ9GZU5 481 aa13.23□□□□□ -0.29
NCAPD3-212ENST00000534290 WBP1LQ9NX94 342 aa13.23□□□□□ -0.29
NCAPD3-212ENST00000534290 ERVV-1B6SEH8 477 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 CRY2Q49AN0 593 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 TBC1D32Q96NH3 1257 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 PSMD1Q99460 953 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 GJA3Q9Y6H8 435 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 SCN4AP35499 1836 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 BCORQ6W2J9 1755 aa13.22□□□□□ -0.29
NCAPD3-212ENST00000534290 RASSF10A6NK89 507 aa13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 GNAI2P04899 355 aa13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 EIF6P56537 245 aaKnown RBP13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 CC2D2BQ6DHV5 1058 aa13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 RPGRQ92834 1020 aaKnown RBP13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 C22orf23Q9BZE7 217 aa13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 LNPKQ9C0E8 428 aa13.21□□□□□ -0.29
NCAPD3-212ENST00000534290 CACNA1SQ13698 1873 aa13.21□□□□□ -0.3
NCAPD3-212ENST00000534290 HOXA10P31260 410 aaPredicted RBP13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 LBX1P52954 281 aa13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 KIF6Q6ZMV9 814 aa13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 TTLL7Q6ZT98 887 aa13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 ABT1Q9ULW3 272 aaKnown RBP13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 ARFGEF2Q9Y6D5 1785 aa13.2□□□□□ -0.3
NCAPD3-212ENST00000534290 MAP3K15Q6ZN16 1313 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 MYL6BP14649 208 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 GPTP24298 496 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 FKBP5Q13451 457 aaPredicted RBP13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 NBR1Q14596 966 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 GRIPAP1Q4V328 841 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 SUSD4Q5VX71 490 aa13.19□□□□□ -0.3
NCAPD3-212ENST00000534290 WDR33Q9C0J8 1336 aaKnown RBP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 LMOD1P29536 600 aaPredicted RBP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 EIF4A1P60842 406 aaKnown RBP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 MAP2K1Q02750 393 aaPredicted RBP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 FLIIQ13045 1269 aa13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 SLC4A10Q6U841 1118 aa13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 LARGE2Q8N3Y3 721 aa13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 IL27Q8NEV9 243 aa13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 RBM17Q96I25 401 aaKnown RBP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 DDX21Q9NR30 783 aaKnown RBP eCLIP13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 ABCC12Q96J65 1359 aa13.18□□□□□ -0.3
NCAPD3-212ENST00000534290 CDC45O75419 566 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 EPS15P42566 896 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 SCNN1DP51172 638 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 HDGFL1Q5TGJ6 251 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 ZNF34Q8IZ26 560 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 ZBTB3Q9H5J0 574 aa13.17□□□□□ -0.3
NCAPD3-212ENST00000534290 UBN2Q6ZU65 1347 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms