RNA–Protein interactions for RNA: ENST00000533761.5

CCDC90B-218, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 1,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-218ENST00000533761 COL15A1P39059 1388 aa13.77□□□□□ -0.21
CCDC90B-218ENST00000533761 PXDNLA1KZ92 1463 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 ZPR1O75312 459 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 RLBP1P12271 317 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 UBR3Q6ZT12 1888 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 COPS6Q7L5N1 327 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 LRP10Q7Z4F1 713 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 TMEM57Q8N5G2 664 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 PNPLA7Q6ZV29 1317 aa13.76□□□□□ -0.21
CCDC90B-218ENST00000533761 INTS3Q68E01 1043 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 KIF6Q6ZMV9 814 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 AMIGO3Q86WK7 504 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 DZIP3Q86Y13 1208 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 AIMP1Q12904 312 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 R3HDM1Q15032 1099 aaKnown RBP13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 B4GALNT3Q6L9W6 998 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 XAGE3Q8WTP9 111 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 NARFQ9UHQ1 456 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 TBC1D2BQ9UPU7 963 aa13.75□□□□□ -0.21
CCDC90B-218ENST00000533761 SMIM5Q71RC9 77 aa13.74□□□□□ -0.21
CCDC90B-218ENST00000533761 RNF25Q96BH1 459 aaPredicted RBP13.74□□□□□ -0.21
CCDC90B-218ENST00000533761 PHAXQ9H814 394 aaKnown RBP13.74□□□□□ -0.21
CCDC90B-218ENST00000533761 HDAC5Q9UQL6 1122 aa13.74□□□□□ -0.21
CCDC90B-218ENST00000533761 ERVV-1B6SEH8 477 aa13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 SLC4A10Q6U841 1118 aa13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 ERICH6Q7L0X2 663 aa13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 CENPQQ7L2Z9 268 aaPredicted RBP13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 SLC16A10Q8TF71 515 aa13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 QSER1Q2KHR3 1735 aa13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 USP42Q9H9J4 1324 aaKnown RBP13.73□□□□□ -0.21
CCDC90B-218ENST00000533761 RGL2O15211 777 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 CLEC4GQ6UXB4 293 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 TTLL7Q6ZT98 887 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 PLBD2Q8NHP8 589 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 ZNF652Q9Y2D9 606 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 MAP3K15Q6ZN16 1313 aa13.72□□□□□ -0.21
CCDC90B-218ENST00000533761 NEXNQ0ZGT2 675 aa13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 G2E3Q7L622 706 aa13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 RIC3Q7Z5B4 369 aa13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 NLGN1Q8N2Q7 840 aa13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 RWDD1Q9H446 243 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 DAXXQ9UER7 740 aaPredicted RBP13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 TUBGCP6Q96RT7 1819 aa13.71□□□□□ -0.21
CCDC90B-218ENST00000533761 CAMTA2O94983 1202 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 GNAI3P08754 354 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 USPL1Q5W0Q7 1092 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 KSR2Q6VAB6 950 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 TMC2Q8TDI7 906 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 DNAAF4Q8WXU2 420 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 ZBTB3Q9H5J0 574 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 ZBTB40Q9NUA8 1239 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 SRP68Q9UHB9 627 aaKnown RBP13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 TNNQ9UQP3 1299 aa13.71□□□□□ -0.22
CCDC90B-218ENST00000533761 PI4KAP2A4QPH2 592 aa13.7□□□□□ -0.22
CCDC90B-218ENST00000533761 PPP4R3BQ5MIZ7 849 aa13.7□□□□□ -0.22
CCDC90B-218ENST00000533761 PI4KAP1Q8N8J0 262 aa13.7□□□□□ -0.22
CCDC90B-218ENST00000533761 SRCIN1Q9C0H9 1055 aa13.7□□□□□ -0.22
CCDC90B-218ENST00000533761 ATP10DQ9P241 1426 aa13.7□□□□□ -0.22
CCDC90B-218ENST00000533761 C4AP0C0L4 1744 aa13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 ZBTB7BO15156 539 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 GYS1P13807 737 aa13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 HSP90AB3PQ58FF7 597 aa13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 GIGYF2Q6Y7W6 1299 aaKnown RBP13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 PDGFDQ9GZP0 370 aaPredicted RBP13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 MAP3K2Q9Y2U5 619 aa13.69□□□□□ -0.22
CCDC90B-218ENST00000533761 N4BP2Q86UW6 1770 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-218ENST00000533761 HLFQ16534 295 aa13.68□□□□□ -0.22
CCDC90B-218ENST00000533761 Q6ZNB5 142 aa13.68□□□□□ -0.22
CCDC90B-218ENST00000533761 MTFR1LQ9H019 292 aa13.68□□□□□ -0.22
CCDC90B-218ENST00000533761 IBTKQ9P2D0 1353 aaPredicted RBP13.68□□□□□ -0.22
CCDC90B-218ENST00000533761 F6X3S4 739 aa13.67□□□□□ -0.22
CCDC90B-218ENST00000533761 ALDH1L1O75891 902 aa13.67□□□□□ -0.22
CCDC90B-218ENST00000533761 BCL2L12Q9HB09 334 aa13.67□□□□□ -0.22
CCDC90B-218ENST00000533761 TCIRG1Q13488 830 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 HDAC1Q13547 482 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 SETDB2Q96T68 719 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 METTL22Q9BUU2 404 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 ADCY9O60503 1353 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 HMMRO75330 724 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 ZBTB7AO95365 584 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 RPAP2Q8IXW5 612 aaPredicted RBP13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 LINS1Q8NG48 757 aa13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 NIP7Q9Y221 180 aaKnown RBP eCLIP13.66□□□□□ -0.22
CCDC90B-218ENST00000533761 SCN7AQ01118 1682 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 GNAI2P04899 355 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 UBTFL1P0CB47 393 aaPredicted RBP13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 TBC1D9BQ66K14 1250 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 MSL1Q68DK7 614 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 BICDL1Q6ZP65 573 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 MFRPQ9BY79 579 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 BCORQ6W2J9 1755 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 CASZ1Q86V15 1759 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 NUP98P52948 1817 aa13.65□□□□□ -0.22
CCDC90B-218ENST00000533761 TM4SF1P30408 202 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 TRIM28Q13263 835 aaKnown RBP13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 NFIXQ14938 502 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 PARP10Q53GL7 1025 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 BEND3Q5T5X7 828 aa13.64□□□□□ -0.23
CCDC90B-218ENST00000533761 ZNF34Q8IZ26 560 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms