RNA–Protein interactions for RNA: ENST00000533499.1

NXF1-216, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-216ENST00000533499 RBM17Q96I25 401 aaKnown RBP21.88■■□□□ 1.09
NXF1-216ENST00000533499 BICC1Q9H694 974 aaKnown RBP21.88■■□□□ 1.09
NXF1-216ENST00000533499 LAMB2P55268 1798 aa21.88■■□□□ 1.09
NXF1-216ENST00000533499 MYH3P11055 1940 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 ZBTB7BO15156 539 aaPredicted RBP21.87■■□□□ 1.09
NXF1-216ENST00000533499 SRGNP10124 158 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 NPR1P16066 1061 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 MASTLQ96GX5 879 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 PLA2G12BQ9BX93 195 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 CHMP4BQ9H444 224 aaKnown RBP21.87■■□□□ 1.09
NXF1-216ENST00000533499 PDZRN3Q9UPQ7 1066 aa21.87■■□□□ 1.09
NXF1-216ENST00000533499 COL11A2P13942 1736 aaPredicted RBP21.86■■□□□ 1.09
NXF1-216ENST00000533499 FOXO4P98177 505 aa21.86■■□□□ 1.09
NXF1-216ENST00000533499 TTLL11Q8NHH1 800 aa21.86■■□□□ 1.09
NXF1-216ENST00000533499 ZNF219Q9P2Y4 722 aaPredicted RBP21.86■■□□□ 1.09
NXF1-216ENST00000533499 RIC1Q4ADV7 1423 aa21.86■■□□□ 1.09
NXF1-216ENST00000533499 SF3B3Q15393 1217 aaKnown RBP21.85■■□□□ 1.09
NXF1-216ENST00000533499 FAM161AQ3B820 660 aa21.85■■□□□ 1.09
NXF1-216ENST00000533499 KAZALD1Q96I82 304 aa21.85■■□□□ 1.09
NXF1-216ENST00000533499 GREM2Q9H772 168 aa21.85■■□□□ 1.09
NXF1-216ENST00000533499 SEC31BQ9NQW1 1179 aa21.85■■□□□ 1.09
NXF1-216ENST00000533499 PIM2Q9P1W9 311 aa21.85■■□□□ 1.09
NXF1-216ENST00000533499 CRY2Q49AN0 593 aa21.84■■□□□ 1.09
NXF1-216ENST00000533499 TAF7LQ5H9L4 462 aa21.84■■□□□ 1.09
NXF1-216ENST00000533499 STYK1Q6J9G0 422 aa21.84■■□□□ 1.09
NXF1-216ENST00000533499 CACNA1SQ13698 1873 aa21.83■■□□□ 1.09
NXF1-216ENST00000533499 KLRG2A4D1S0 409 aaPredicted RBP21.83■■□□□ 1.09
NXF1-216ENST00000533499 ANKRD44Q8N8A2 993 aa21.83■■□□□ 1.09
NXF1-216ENST00000533499 CNKSR1Q969H4 720 aa21.83■■□□□ 1.09
NXF1-216ENST00000533499 TAF1P21675 1872 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 ANKRD18BA2A2Z9 1011 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 ALDH1B1P30837 517 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 IFIT5Q13325 482 aaKnown RBP21.82■■□□□ 1.08
NXF1-216ENST00000533499 CCDC57Q2TAC2 916 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 DALRD3Q5D0E6 543 aaKnown RBP21.82■■□□□ 1.08
NXF1-216ENST00000533499 TTLL6Q8N841 843 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 BCS1LQ9Y276 419 aa21.82■■□□□ 1.08
NXF1-216ENST00000533499 NEFLP07196 543 aa21.81■■□□□ 1.08
NXF1-216ENST00000533499 CSF1RP07333 972 aa21.81■■□□□ 1.08
NXF1-216ENST00000533499 KCNA3P22001 575 aa21.81■■□□□ 1.08
NXF1-216ENST00000533499 ITGA6P23229 1130 aa21.81■■□□□ 1.08
NXF1-216ENST00000533499 EXOC6Q8TAG9 804 aa21.81■■□□□ 1.08
NXF1-216ENST00000533499 KIAA1551Q9HCM1 1747 aa21.8■■□□□ 1.08
NXF1-216ENST00000533499 HOXA10P31260 410 aaPredicted RBP21.8■■□□□ 1.08
NXF1-216ENST00000533499 CELF1Q92879 486 aaKnown RBP21.8■■□□□ 1.08
NXF1-216ENST00000533499 CRAMP1Q96RY5 1269 aa21.8■■□□□ 1.08
NXF1-216ENST00000533499 CDC5LQ99459 802 aaKnown RBP21.8■■□□□ 1.08
NXF1-216ENST00000533499 ZBTB40Q9NUA8 1239 aa21.8■■□□□ 1.08
NXF1-216ENST00000533499 GRAPQ13588 217 aa21.79■■□□□ 1.08
NXF1-216ENST00000533499 PRPF40BQ6NWY9 871 aaKnown RBP21.79■■□□□ 1.08
NXF1-216ENST00000533499 ANKRD18AQ8IVF6 992 aa21.79■■□□□ 1.08
NXF1-216ENST00000533499 GRAPLQ8TC17 118 aaPredicted RBP21.79■■□□□ 1.08
NXF1-216ENST00000533499 ZNF594Q96JF6 807 aaPredicted RBP21.79■■□□□ 1.08
NXF1-216ENST00000533499 DLEC1Q9Y238 1755 aa21.79■■□□□ 1.08
NXF1-216ENST00000533499 PPEF1O14829 653 aaPredicted RBP21.78■■□□□ 1.08
NXF1-216ENST00000533499 SRGAP3O43295 1099 aa21.78■■□□□ 1.08
NXF1-216ENST00000533499 IGHMBP2P38935 993 aaKnown RBP21.78■■□□□ 1.08
NXF1-216ENST00000533499 RPS8P62241 208 aaKnown RBP21.78■■□□□ 1.08
NXF1-216ENST00000533499 RABL6Q3YEC7 729 aaPredicted RBP21.78■■□□□ 1.08
NXF1-216ENST00000533499 TMX4Q9H1E5 349 aaPredicted RBP21.78■■□□□ 1.08
NXF1-216ENST00000533499 GPR162Q16538 588 aa21.77■■□□□ 1.08
NXF1-216ENST00000533499 MPHOSPH8Q99549 860 aa21.77■■□□□ 1.08
NXF1-216ENST00000533499 SPEF2Q9C093 1822 aa21.77■■□□□ 1.08
NXF1-216ENST00000533499 C21orf2O43822 256 aa21.76■■□□□ 1.07
NXF1-216ENST00000533499 KLHDC4Q8TBB5 520 aa21.76■■□□□ 1.07
NXF1-216ENST00000533499 SLX4Q8IY92 1834 aa21.76■■□□□ 1.07
NXF1-216ENST00000533499 RTL9Q8NET4 1388 aa21.75■■□□□ 1.07
NXF1-216ENST00000533499 BBOX1O75936 387 aa21.75■■□□□ 1.07
NXF1-216ENST00000533499 CNNM1Q9NRU3 951 aa21.75■■□□□ 1.07
NXF1-216ENST00000533499 PNMA6EA0A0J9YXQ4 647 aa21.74■■□□□ 1.07
NXF1-216ENST00000533499 ATP8B2P98198 1209 aa21.74■■□□□ 1.07
NXF1-216ENST00000533499 CEP85Q6P2H3 762 aa21.74■■□□□ 1.07
NXF1-216ENST00000533499 OLFM4Q6UX06 510 aa21.74■■□□□ 1.07
NXF1-216ENST00000533499 SIL1Q9H173 461 aa21.74■■□□□ 1.07
NXF1-216ENST00000533499 SLC51AQ86UW1 340 aa21.73■■□□□ 1.07
NXF1-216ENST00000533499 PA2G4Q9UQ80 394 aaKnown RBP21.73■■□□□ 1.07
NXF1-216ENST00000533499 BRCA1P38398 1863 aaKnown RBP21.73■■□□□ 1.07
NXF1-216ENST00000533499 COL4A1P02462 1669 aa21.72■■□□□ 1.07
NXF1-216ENST00000533499 DCAF8L1A6NGE4 600 aa21.72■■□□□ 1.07
NXF1-216ENST00000533499 LDHAL6AQ6ZMR3 332 aa21.72■■□□□ 1.07
NXF1-216ENST00000533499 HMMRO75330 724 aa21.71■■□□□ 1.07
NXF1-216ENST00000533499 OS9Q13438 667 aaPredicted RBP21.71■■□□□ 1.07
NXF1-216ENST00000533499 MTX1Q13505 466 aa21.71■■□□□ 1.07
NXF1-216ENST00000533499 RPAP2Q8IXW5 612 aaPredicted RBP21.71■■□□□ 1.07
NXF1-216ENST00000533499 ATP6V0A2Q9Y487 856 aa21.71■■□□□ 1.07
NXF1-216ENST00000533499 YBX3P16989 372 aaKnown RBP eCLIP21.7■■□□□ 1.06
NXF1-216ENST00000533499 RFX5P48382 616 aaPredicted RBP21.7■■□□□ 1.06
NXF1-216ENST00000533499 ARHGAP27Q6ZUM4 889 aa21.7■■□□□ 1.06
NXF1-216ENST00000533499 TMC4Q7Z404 712 aa21.7■■□□□ 1.06
NXF1-216ENST00000533499 SP8Q8IXZ3 490 aa21.7■■□□□ 1.06
NXF1-216ENST00000533499 PUS3Q9BZE2 481 aaKnown RBP21.7■■□□□ 1.06
NXF1-216ENST00000533499 SRCAPQ6ZRS2 3230 aa21.69■■□□□ 1.06
NXF1-216ENST00000533499 CCDC93Q567U6 631 aa21.69■■□□□ 1.06
NXF1-216ENST00000533499 BSDC1Q9NW68 430 aaPredicted RBP21.69■■□□□ 1.06
NXF1-216ENST00000533499 ANKIB1Q9P2G1 1089 aa21.69■■□□□ 1.06
NXF1-216ENST00000533499 NSFL1CQ9UNZ2 370 aaKnown RBP21.69■■□□□ 1.06
NXF1-216ENST00000533499 PCDHB15Q9Y5E8 787 aa21.69■■□□□ 1.06
NXF1-216ENST00000533499 SURF6O75683 361 aaKnown RBP21.68■■□□□ 1.06
NXF1-216ENST00000533499 PTPN12Q05209 780 aaKnown RBP21.68■■□□□ 1.06
NXF1-216ENST00000533499 LRRC24Q50LG9 513 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms