RNA–Protein interactions for RNA: ENST00000533491.1

CSF3R-215, Transcript of colony stimulating factor 3 receptor, humanhuman

TSL 5

Gene CSF3R, Length 512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF3R-215ENST00000533491 NRXN2Q9P2S2 1712 aa16.98■□□□□ 0.31
CSF3R-215ENST00000533491 GTF2E1P29083 439 aaPredicted RBP16.97■□□□□ 0.31
CSF3R-215ENST00000533491 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
CSF3R-215ENST00000533491 NOP58Q9Y2X3 529 aaKnown RBP16.97■□□□□ 0.31
CSF3R-215ENST00000533491 CHMP3Q9Y3E7 222 aa16.97■□□□□ 0.31
CSF3R-215ENST00000533491 TNRC6CQ9HCJ0 1690 aaKnown RBP16.97■□□□□ 0.31
CSF3R-215ENST00000533491 SURF6O75683 361 aaKnown RBP16.96■□□□□ 0.31
CSF3R-215ENST00000533491 NUCB1Q02818 461 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 FAM161AQ3B820 660 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 ANKRD45Q5TZF3 282 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 PRR5LQ6MZQ0 368 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 ZNF594Q96JF6 807 aaPredicted RBP16.96■□□□□ 0.31
CSF3R-215ENST00000533491 GREM2Q9H772 168 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 ANKRD31Q8N7Z5 1873 aa16.96■□□□□ 0.31
CSF3R-215ENST00000533491 COL4A1P02462 1669 aa16.95■□□□□ 0.3
CSF3R-215ENST00000533491 APBB1O00213 710 aa16.95■□□□□ 0.3
CSF3R-215ENST00000533491 MMP10P09238 476 aa16.95■□□□□ 0.3
CSF3R-215ENST00000533491 COPRSQ9NQ92 184 aa16.95■□□□□ 0.3
CSF3R-215ENST00000533491 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
CSF3R-215ENST00000533491 SMARCA5O60264 1052 aaPredicted RBP16.94■□□□□ 0.3
CSF3R-215ENST00000533491 SF3B3Q15393 1217 aaKnown RBP16.94■□□□□ 0.3
CSF3R-215ENST00000533491 CNBD1Q8NA66 436 aa16.94■□□□□ 0.3
CSF3R-215ENST00000533491 HSP90B1P14625 803 aaKnown RBP16.93■□□□□ 0.3
CSF3R-215ENST00000533491 ITGA6P23229 1130 aa16.93■□□□□ 0.3
CSF3R-215ENST00000533491 PDE4AP27815 886 aa16.93■□□□□ 0.3
CSF3R-215ENST00000533491 CHD1LQ86WJ1 897 aa16.93■□□□□ 0.3
CSF3R-215ENST00000533491 SIL1Q9H173 461 aa16.93■□□□□ 0.3
CSF3R-215ENST00000533491 SEC31BQ9NQW1 1179 aa16.93■□□□□ 0.3
CSF3R-215ENST00000533491 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.93■□□□□ 0.3
CSF3R-215ENST00000533491 SASH1O94885 1247 aa16.92■□□□□ 0.3
CSF3R-215ENST00000533491 IFIT5Q13325 482 aaKnown RBP16.92■□□□□ 0.3
CSF3R-215ENST00000533491 R3HDM1Q15032 1099 aaKnown RBP16.92■□□□□ 0.3
CSF3R-215ENST00000533491 CCDC57Q2TAC2 916 aa16.92■□□□□ 0.3
CSF3R-215ENST00000533491 PUS3Q9BZE2 481 aaKnown RBP16.92■□□□□ 0.3
CSF3R-215ENST00000533491 LNPKQ9C0E8 428 aa16.92■□□□□ 0.3
CSF3R-215ENST00000533491 RTL9Q8NET4 1388 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 NPHP1O15259 732 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 RAB11FIP3O75154 756 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 CCDC152Q4G0S7 254 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 LRRC24Q50LG9 513 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 ATG9AQ7Z3C6 839 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 C16orf71Q8IYS4 520 aaPredicted RBP16.91■□□□□ 0.3
CSF3R-215ENST00000533491 SLC16A10Q8TF71 515 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 NLRP3Q96P20 1036 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 PARP3Q9Y6F1 533 aa16.91■□□□□ 0.3
CSF3R-215ENST00000533491 RIC1Q4ADV7 1423 aa16.9■□□□□ 0.3
CSF3R-215ENST00000533491 ANKRD18BA2A2Z9 1011 aa16.9■□□□□ 0.3
CSF3R-215ENST00000533491 G3BP1Q13283 466 aaKnown RBP eCLIP16.9■□□□□ 0.3
CSF3R-215ENST00000533491 RHPN1Q8TCX5 695 aa16.9■□□□□ 0.3
CSF3R-215ENST00000533491 LRRCC1Q9C099 1032 aa16.9■□□□□ 0.3
CSF3R-215ENST00000533491 EYA2O00167 538 aa16.89■□□□□ 0.29
CSF3R-215ENST00000533491 ST5P78524 1137 aa16.89■□□□□ 0.29
CSF3R-215ENST00000533491 OS9Q13438 667 aaPredicted RBP16.89■□□□□ 0.29
CSF3R-215ENST00000533491 HSP90AB4PQ58FF6 505 aa16.89■□□□□ 0.29
CSF3R-215ENST00000533491 BCL11AQ9H165 835 aa16.89■□□□□ 0.29
CSF3R-215ENST00000533491 IL1RAPL2Q9NP60 686 aa16.89■□□□□ 0.29
CSF3R-215ENST00000533491 PSDA5PKW4 1024 aaPredicted RBP16.88■□□□□ 0.29
CSF3R-215ENST00000533491 RGS3P49796 1198 aa16.88■□□□□ 0.29
CSF3R-215ENST00000533491 OTUD7AQ8TE49 926 aaPredicted RBP16.88■□□□□ 0.29
CSF3R-215ENST00000533491 KIF1BPQ96EK5 621 aa16.88■□□□□ 0.29
CSF3R-215ENST00000533491 ZBTB7AO95365 584 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 TFCP2Q12800 502 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 CRY2Q49AN0 593 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 TAF7LQ5H9L4 462 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 RIPOR2Q9Y4F9 1068 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 LRP5O75197 1615 aa16.87■□□□□ 0.29
CSF3R-215ENST00000533491 KLRG2A4D1S0 409 aaPredicted RBP16.86■□□□□ 0.29
CSF3R-215ENST00000533491 CIAO1O76071 339 aa16.86■□□□□ 0.29
CSF3R-215ENST00000533491 LDHAL6AQ6ZMR3 332 aa16.86■□□□□ 0.29
CSF3R-215ENST00000533491 ERC1Q8IUD2 1116 aa16.86■□□□□ 0.29
CSF3R-215ENST00000533491 CELF1Q92879 486 aaKnown RBP16.86■□□□□ 0.29
CSF3R-215ENST00000533491 BRIP1Q9BX63 1249 aa16.86■□□□□ 0.29
CSF3R-215ENST00000533491 ATF5Q9Y2D1 282 aaPredicted RBP16.86■□□□□ 0.29
CSF3R-215ENST00000533491 COL11A2P13942 1736 aaPredicted RBP16.86■□□□□ 0.29
CSF3R-215ENST00000533491 A0A1B0GUL6 1792 aa16.86■□□□□ 0.29
CSF3R-215ENST00000533491 IL15P40933 162 aaPredicted RBP16.85■□□□□ 0.29
CSF3R-215ENST00000533491 FBXO3Q9UK99 471 aa16.85■□□□□ 0.29
CSF3R-215ENST00000533491 PLEKHM2Q8IWE5 1019 aa16.84■□□□□ 0.29
CSF3R-215ENST00000533491 EAF2Q96CJ1 260 aaPredicted RBP16.84■□□□□ 0.29
CSF3R-215ENST00000533491 CNNM1Q9NRU3 951 aa16.84■□□□□ 0.29
CSF3R-215ENST00000533491 ZBTB47Q9UFB7 747 aaPredicted RBP16.84■□□□□ 0.29
CSF3R-215ENST00000533491 SALL3Q9BXA9 1300 aa16.84■□□□□ 0.29
CSF3R-215ENST00000533491 HOXA10P31260 410 aaPredicted RBP16.83■□□□□ 0.28
CSF3R-215ENST00000533491 CACNA1SQ13698 1873 aa16.83■□□□□ 0.28
CSF3R-215ENST00000533491 DDX46Q7L014 1031 aaKnown RBP16.83■□□□□ 0.28
CSF3R-215ENST00000533491 ANKRD18AQ8IVF6 992 aa16.83■□□□□ 0.28
CSF3R-215ENST00000533491 CDC5LQ99459 802 aaKnown RBP16.83■□□□□ 0.28
CSF3R-215ENST00000533491 MTFR1LQ9H019 292 aa16.83■□□□□ 0.28
CSF3R-215ENST00000533491 KIF13BQ9NQT8 1826 aa16.82■□□□□ 0.28
CSF3R-215ENST00000533491 IGHMBP2P38935 993 aaKnown RBP16.82■□□□□ 0.28
CSF3R-215ENST00000533491 RPS8P62241 208 aaKnown RBP16.82■□□□□ 0.28
CSF3R-215ENST00000533491 SLC51AQ86UW1 340 aa16.82■□□□□ 0.28
CSF3R-215ENST00000533491 RPGRQ92834 1020 aaKnown RBP16.82■□□□□ 0.28
CSF3R-215ENST00000533491 MPHOSPH8Q99549 860 aa16.82■□□□□ 0.28
CSF3R-215ENST00000533491 SRGNP10124 158 aa16.81■□□□□ 0.28
CSF3R-215ENST00000533491 PDE6BP35913 854 aa16.81■□□□□ 0.28
CSF3R-215ENST00000533491 TNNI3KQ59H18 835 aa16.81■□□□□ 0.28
CSF3R-215ENST00000533491 CLASRPQ8N2M8 674 aaKnown RBP16.81■□□□□ 0.28
CSF3R-215ENST00000533491 VGLL2Q8N8G2 317 aa16.81■□□□□ 0.28
CSF3R-215ENST00000533491 HELBQ8NG08 1087 aaPredicted RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms