RNA–Protein interactions for RNA: ENST00000533440.1

NXF1-215, Transcript of nuclear RNA export factor 1, humanhuman

TSL 2

Gene NXF1, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-215ENST00000533440 TNIP1Q15025 636 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 RGMBQ6NW40 437 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 GIGYF2Q6Y7W6 1299 aaKnown RBP10.4□□□□□ -0.74
NXF1-215ENST00000533440 PPP1R42Q7Z4L9 355 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 USP48Q86UV5 1035 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 SP8Q8IXZ3 490 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 BCL2L13Q9BXK5 485 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 ZBTB3Q9H5J0 574 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 MIS18AQ9NYP9 233 aa10.4□□□□□ -0.74
NXF1-215ENST00000533440 CNOT7Q9UIV1 285 aaKnown RBP10.4□□□□□ -0.74
NXF1-215ENST00000533440 RRP7AQ9Y3A4 280 aaKnown RBP10.4□□□□□ -0.74
NXF1-215ENST00000533440 SHTN1A0MZ66 631 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 YDJCA8MPS7 323 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 H7C1D1 291 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 BBOX1O75936 387 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 RAD17O75943 681 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 PARP10Q53GL7 1025 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 DLK2Q6UY11 383 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 DPP8Q6V1X1 898 aaPredicted RBP10.39□□□□□ -0.75
NXF1-215ENST00000533440 MPNDQ8N594 471 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 CCDC102AQ96A19 550 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 CFAP53Q96M91 514 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 RNF186Q9NXI6 227 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 NUDCQ9Y266 331 aa10.39□□□□□ -0.75
NXF1-215ENST00000533440 U2AF1L5P0DN76 240 aaPredicted RBP10.38□□□□□ -0.75
NXF1-215ENST00000533440 MYL6BP14649 208 aa10.38□□□□□ -0.75
NXF1-215ENST00000533440 EIF4A1P60842 406 aaKnown RBP10.38□□□□□ -0.75
NXF1-215ENST00000533440 U2AF1Q01081 240 aaKnown RBP eCLIP10.38□□□□□ -0.754e-16■■■■■ 31.9
NXF1-215ENST00000533440 KIF23Q02241 960 aaPredicted RBP10.38□□□□□ -0.75
NXF1-215ENST00000533440 MICALL2Q8IY33 904 aa10.38□□□□□ -0.75
NXF1-215ENST00000533440 PNISRQ8TF01 805 aaKnown RBP10.38□□□□□ -0.75
NXF1-215ENST00000533440 DPF2Q92785 391 aa10.38□□□□□ -0.75
NXF1-215ENST00000533440 GBA2Q9HCG7 927 aaPredicted RBP10.38□□□□□ -0.75
NXF1-215ENST00000533440 KDM3BQ7LBC6 1761 aa10.38□□□□□ -0.75
NXF1-215ENST00000533440 ERBB4Q15303 1308 aa10.37□□□□□ -0.75
NXF1-215ENST00000533440 TRPA1O75762 1119 aa10.37□□□□□ -0.75
NXF1-215ENST00000533440 LRP10Q7Z4F1 713 aa10.37□□□□□ -0.75
NXF1-215ENST00000533440 CTU1Q7Z7A3 348 aaKnown RBP10.37□□□□□ -0.75
NXF1-215ENST00000533440 C2orf69Q8N8R5 385 aa10.37□□□□□ -0.75
NXF1-215ENST00000533440 CSRNP1Q96S65 589 aa10.37□□□□□ -0.75
NXF1-215ENST00000533440 UTP14AQ9BVJ6 771 aaKnown RBP10.37□□□□□ -0.75
NXF1-215ENST00000533440 DUOX1Q9NRD9 1551 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 SLC10A3P09131 477 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 ZNF157P51786 506 aaPredicted RBP10.36□□□□□ -0.75
NXF1-215ENST00000533440 CNGB1Q14028 1251 aaPredicted RBP10.36□□□□□ -0.75
NXF1-215ENST00000533440 SAMD7Q7Z3H4 446 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 KRT26Q7Z3Y9 468 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 ZBTB12Q9Y330 459 aaPredicted RBP10.36□□□□□ -0.75
NXF1-215ENST00000533440 AKAP11Q9UKA4 1901 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 ANKRD36CQ5JPF3 1778 aa10.36□□□□□ -0.75
NXF1-215ENST00000533440 POLR2AP24928 1970 aaKnown RBP10.35□□□□□ -0.75
NXF1-215ENST00000533440 LAMB2P55268 1798 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 ADM5C9JUS6 153 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 PSMD14O00487 310 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 EGFRP00533 1210 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 GRAPQ13588 217 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 TBC1D10BQ4KMP7 808 aaPredicted RBP10.35□□□□□ -0.75
NXF1-215ENST00000533440 GRAPLQ8TC17 118 aaPredicted RBP10.35□□□□□ -0.75
NXF1-215ENST00000533440 PCGF6Q9BYE7 350 aa10.35□□□□□ -0.75
NXF1-215ENST00000533440 RPS12P25398 132 aaKnown RBP10.34□□□□□ -0.75
NXF1-215ENST00000533440 PDIA6Q15084 440 aa10.34□□□□□ -0.75
NXF1-215ENST00000533440 DDX46Q7L014 1031 aaKnown RBP10.34□□□□□ -0.75
NXF1-215ENST00000533440 TMC4Q7Z404 712 aa10.34□□□□□ -0.75
NXF1-215ENST00000533440 REM2Q8IYK8 340 aaPredicted RBP10.34□□□□□ -0.75
NXF1-215ENST00000533440 DCPSQ96C86 337 aaKnown RBP10.34□□□□□ -0.75
NXF1-215ENST00000533440 FOXD4L1Q9NU39 408 aa10.34□□□□□ -0.75
NXF1-215ENST00000533440 HPS5Q9UPZ3 1129 aa10.34□□□□□ -0.75
NXF1-215ENST00000533440 LRRC37AA6NMS7 1700 aa10.33□□□□□ -0.76
NXF1-215ENST00000533440 HCLS1P14317 486 aaPredicted RBP10.33□□□□□ -0.76
NXF1-215ENST00000533440 PPP2R1AP30153 589 aa10.33□□□□□ -0.76
NXF1-215ENST00000533440 PKN2Q16513 984 aaKnown RBP10.33□□□□□ -0.76
NXF1-215ENST00000533440 NLRP10Q86W26 655 aa10.33□□□□□ -0.76
NXF1-215ENST00000533440 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
NXF1-215ENST00000533440 RTL9Q8NET4 1388 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 WASHC4Q2M389 1173 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 HSP90AB3PQ58FF7 597 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 RASAL3Q86YV0 1011 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
NXF1-215ENST00000533440 DBNDD1Q9H9R9 158 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 MKI67P46013 3256 aaKnown RBP10.32□□□□□ -0.76
NXF1-215ENST00000533440 TAF1P21675 1872 aa10.32□□□□□ -0.76
NXF1-215ENST00000533440 PROSER3Q2NL68 480 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 KIF4BQ2VIQ3 1234 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 RBM26Q5T8P6 1007 aaKnown RBP10.31□□□□□ -0.76
NXF1-215ENST00000533440 SULF1Q8IWU6 871 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 CDCA5Q96FF9 252 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 KCNQ5Q9NR82 932 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 GGA3Q9NZ52 723 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 POLLQ9UGP5 575 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 TRMT112Q9UI30 125 aaKnown RBP10.31□□□□□ -0.76
NXF1-215ENST00000533440 SH3TC1Q8TE82 1336 aa10.31□□□□□ -0.76
NXF1-215ENST00000533440 ECE2O60344 883 aa10.3□□□□□ -0.76
NXF1-215ENST00000533440 VIL1P09327 827 aaKnown RBP10.3□□□□□ -0.76
NXF1-215ENST00000533440 FKBP1BP68106 108 aa10.3□□□□□ -0.76
NXF1-215ENST00000533440 TCIRG1Q13488 830 aa10.3□□□□□ -0.76
NXF1-215ENST00000533440 NOM1Q5C9Z4 860 aaKnown RBP10.3□□□□□ -0.76
NXF1-215ENST00000533440 ZNF296Q8WUU4 475 aaPredicted RBP10.3□□□□□ -0.76
NXF1-215ENST00000533440 GCC1Q96CN9 775 aa10.3□□□□□ -0.76
NXF1-215ENST00000533440 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
NXF1-215ENST00000533440 NSFL1CQ9UNZ2 370 aaKnown RBP10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms