RNA–Protein interactions for RNA: ENST00000533350.1

PICALM-221, Transcript of phosphatidylinositol binding clathrin assembly protein, humanhuman

TSL 3

Gene PICALM, Length 541 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PICALM-221ENST00000533350 ATXN7L1Q9ULK2 861 aaPredicted RBP7.55□□□□□ -1.2
PICALM-221ENST00000533350 PRR12Q9ULL5 1215 aa7.55□□□□□ -1.2
PICALM-221ENST00000533350 BNIP3LO60238 219 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 ARHGEF15O94989 841 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 FGFR3P22607 806 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 FGD1P98174 961 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 TNP2Q05952 138 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 CCINQ13939 588 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 FAM129BQ96TA1 746 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 COL25A1Q9BXS0 654 aaPredicted RBP7.54□□□□□ -1.2
PICALM-221ENST00000533350 GGNBP2Q9H3C7 697 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 AMOTL2Q9Y2J4 779 aa7.54□□□□□ -1.2
PICALM-221ENST00000533350 GPR182O15218 404 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 TREHO43280 583 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 PHACTR2O75167 634 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 RARAP10276 462 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 RANGAP1P46060 587 aaPredicted RBP7.53□□□□□ -1.2
PICALM-221ENST00000533350 PDE12Q6L8Q7 609 aaKnown RBP7.53□□□□□ -1.2
PICALM-221ENST00000533350 NPAS4Q8IUM7 802 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 SNX29Q8TEQ0 813 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 ELP3Q9H9T3 547 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 KCNMB2Q9Y691 235 aa7.53□□□□□ -1.2
PICALM-221ENST00000533350 PNMA6FA0A0J9YX94 578 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 SASH3O75995 380 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 P4HBP07237 508 aaKnown RBP7.52□□□□□ -1.21
PICALM-221ENST00000533350 TBC1D8BQ0IIM8 1120 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 SPEM2Q0P670 501 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 TRIP4Q15650 581 aaPredicted RBP7.52□□□□□ -1.21
PICALM-221ENST00000533350 NLRP13Q86W25 1043 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 WHAMMQ8TF30 809 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 BHMTQ93088 406 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 SCARF2Q96GP6 870 aaPredicted RBP7.52□□□□□ -1.21
PICALM-221ENST00000533350 CFHR5Q9BXR6 569 aa7.52□□□□□ -1.21
PICALM-221ENST00000533350 PHF20L1A8MW92 1017 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 LDHBP07195 334 aaKnown RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 THBS1P07996 1170 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 SLURP2P0DP57 97 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 BMP4P12644 408 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 NFKB1P19838 968 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 KCNQ4P56696 695 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 XPCQ01831 940 aaPredicted RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 RAB44Q7Z6P3 723 aaPredicted RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 NANOS1Q8WY41 292 aaKnown RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 ALKBH8Q96BT7 664 aaKnown RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 IGFLR1Q9H665 355 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 C11orf16Q9NQ32 467 aa7.51□□□□□ -1.21
PICALM-221ENST00000533350 ABI2Q9NYB9 513 aaPredicted RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 NSFL1CQ9UNZ2 370 aaKnown RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.51□□□□□ -1.21
PICALM-221ENST00000533350 EFSO43281 561 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 CPNE3O75131 537 aaKnown RBP7.5□□□□□ -1.21
PICALM-221ENST00000533350 TNFRSF21O75509 655 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 PSAPP07602 524 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 MX2P20592 715 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 TARSP26639 723 aaKnown RBP7.5□□□□□ -1.21
PICALM-221ENST00000533350 ORC1Q13415 861 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 COL19A1Q14993 1142 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 CSRNP1Q96S65 589 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 MRS2Q9HD23 443 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 STRN4Q9NRL3 753 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 TMEM63CQ9P1W3 806 aa7.5□□□□□ -1.21
PICALM-221ENST00000533350 FOXD3Q9UJU5 478 aaPredicted RBP7.5□□□□□ -1.21
PICALM-221ENST00000533350 EIF1AYO14602 144 aaKnown RBP7.49□□□□□ -1.21
PICALM-221ENST00000533350 MSTNO14793 375 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 CES1P23141 567 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 ITGAEP38570 1179 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 FMR1Q06787 632 aaKnown RBP eCLIP7.49□□□□□ -1.21
PICALM-221ENST00000533350 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
PICALM-221ENST00000533350 RNFT1Q5M7Z0 435 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 PMEPA1Q969W9 287 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 PSMG3-AS1Q96PY0 264 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 KRTAP9-2Q9BYQ4 174 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 GSX2Q9BZM3 304 aa7.49□□□□□ -1.21
PICALM-221ENST00000533350 EGFRP00533 1210 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 ALG1LQ6GMV1 187 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 XKR5Q6UX68 686 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 SLC30A3Q99726 388 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 DNAJC25Q9H1X3 360 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 EFCC1Q9HA90 598 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 NDFIP2Q9NV92 336 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 NLRP2Q9NX02 1062 aa7.48□□□□□ -1.21
PICALM-221ENST00000533350 RBM47A0AV96 593 aaKnown RBP7.47□□□□□ -1.21
PICALM-221ENST00000533350 ZNF16P17020 682 aaPredicted RBP7.47□□□□□ -1.21
PICALM-221ENST00000533350 GRNP28799 593 aaKnown RBP7.47□□□□□ -1.21
PICALM-221ENST00000533350 CTBSQ01459 385 aa7.47□□□□□ -1.21
PICALM-221ENST00000533350 DSC3Q14574 896 aa7.47□□□□□ -1.21
PICALM-221ENST00000533350 GRIN2CQ14957 1233 aa7.47□□□□□ -1.21
PICALM-221ENST00000533350 ZNF428Q96B54 188 aa7.47□□□□□ -1.21
PICALM-221ENST00000533350 SPACA7Q96KW9 195 aa7.47□□□□□ -1.21
PICALM-221ENST00000533350 UBE2OQ9C0C9 1292 aaKnown RBP7.47□□□□□ -1.21
PICALM-221ENST00000533350 E9PSI1 815 aa7.46□□□□□ -1.22
PICALM-221ENST00000533350 MMP20O60882 483 aa7.46□□□□□ -1.22
PICALM-221ENST00000533350 GADD45BO75293 160 aaPredicted RBP7.46□□□□□ -1.22
PICALM-221ENST00000533350 PRPF40AO75400 957 aaKnown RBP7.46□□□□□ -1.22
PICALM-221ENST00000533350 PLAURQ03405 335 aa7.46□□□□□ -1.22
PICALM-221ENST00000533350 ENOX2Q16206 610 aaKnown RBP7.46□□□□□ -1.22
PICALM-221ENST00000533350 FAM182BQ5T319 152 aa7.46□□□□□ -1.22
PICALM-221ENST00000533350 NCAPG2Q86XI2 1143 aa7.46□□□□□ -1.22
PICALM-221ENST00000533350 C1orf127Q8N9H9 656 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms