RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 FAM89AQ96GI7 184 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 PLA2R1Q13018 1463 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 HMGB1P09429 215 aaKnown RBP14.2□□□□□ -0.14
BDNF-218ENST00000533246 TMEM67Q5HYA8 995 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 CCDC70Q6NSX1 233 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 RGS22Q8NE09 1264 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 CAGE1Q8TC20 777 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 A1BGP04217 495 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 SFPQP23246 707 aaKnown RBP eCLIP14.2□□□□□ -0.14
BDNF-218ENST00000533246 ANAPC15P60006 121 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 SLC9C2Q5TAH2 1124 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 PLEKHF1Q96S99 279 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 ANKIB1Q9P2G1 1089 aa14.2□□□□□ -0.14
BDNF-218ENST00000533246 KRT18P05783 430 aaKnown RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 MARCKSP29966 332 aaPredicted RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 EPS15P42566 896 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 ATP2B3Q16720 1220 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 CAVIN4Q5BKX8 364 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 ZNF594Q96JF6 807 aaPredicted RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 MKNK2Q9HBH9 465 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 ANO10Q9NW15 660 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 EIF2AK4Q9P2K8 1649 aaKnown RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 F13A1P00488 732 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 IARSP41252 1262 aaKnown RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 SSR1P43307 286 aaKnown RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 MCMDC2Q4G0Z9 681 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 DBNDD2Q9BQY9 259 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 SLC26A6Q9BXS9 759 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 USP44Q9H0E7 712 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 PBRM1Q86U86 1689 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 APOBRQ0VD83 1088 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 NGLY1Q96IV0 654 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 DDX21Q9NR30 783 aaKnown RBP eCLIP14.19□□□□□ -0.14
BDNF-218ENST00000533246 ZNF219Q9P2Y4 722 aaPredicted RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 ATP7AQ04656 1500 aa14.19□□□□□ -0.14
BDNF-218ENST00000533246 MAGEC2Q9UBF1 373 aaPredicted RBP14.19□□□□□ -0.14
BDNF-218ENST00000533246 SOGA3Q5TF21 947 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 ZNF790Q6PG37 636 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 TSC1Q92574 1164 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 NOL7Q9UMY1 257 aaKnown RBP14.18□□□□□ -0.14
BDNF-218ENST00000533246 YEATS2Q9ULM3 1422 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 SLC5A1P13866 664 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 PTPN14Q15678 1187 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
BDNF-218ENST00000533246 TANGO6Q9C0B7 1094 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 DNAJC25Q9H1X3 360 aa14.18□□□□□ -0.14
BDNF-218ENST00000533246 ATP10AO60312 1499 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 C19orf44Q9H6X5 657 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 DDX19AQ9NUU7 478 aaKnown RBP14.17□□□□□ -0.14
BDNF-218ENST00000533246 PALD1Q9ULE6 856 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 JAG2Q9Y219 1238 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 CD2BP2O95400 341 aaKnown RBP14.17□□□□□ -0.14
BDNF-218ENST00000533246 RBSNQ9H1K0 784 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 VAT1LQ9HCJ6 419 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 ZPR1O75312 459 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 METAP2P50579 478 aaKnown RBP eCLIP14.17□□□□□ -0.14
BDNF-218ENST00000533246 ANO6Q4KMQ2 910 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 HSP90B2PQ58FF3 399 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 CCDC186Q7Z3E2 898 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 PAG1Q9NWQ8 432 aa14.17□□□□□ -0.14
BDNF-218ENST00000533246 DZIP1Q86YF9 867 aaKnown RBP14.16□□□□□ -0.14
BDNF-218ENST00000533246 NCOA7Q8NI08 942 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 TARBP1Q13395 1621 aaKnown RBP14.16□□□□□ -0.14
BDNF-218ENST00000533246 ZFYVE9O95405 1425 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 IQCA1Q86XH1 822 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 SUCLG2Q96I99 432 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 RSPH14Q9UHP6 348 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.16□□□□□ -0.14
BDNF-218ENST00000533246 CTCFLQ8NI51 663 aaPredicted RBP14.16□□□□□ -0.14
BDNF-218ENST00000533246 HMG20BQ9P0W2 317 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 MAST1Q9Y2H9 1570 aa14.16□□□□□ -0.14
BDNF-218ENST00000533246 LOC102724159A0A0B4J2E5 919 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 URI1O94763 535 aaPredicted RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 MCM5P33992 734 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 PWP2Q15269 919 aaKnown RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 SMARCE1Q969G3 411 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 NPHP3Q7Z494 1330 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 IL15P40933 162 aaPredicted RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 TMC6Q7Z403 805 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 C10orf67Q8IYJ2 551 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 NCOA5Q9HCD5 579 aaKnown RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 EDC4Q6P2E9 1401 aaKnown RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 OTUD7BQ6GQQ9 843 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 TRMT1LQ7Z2T5 733 aaKnown RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 MIGA1Q8NAN2 632 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 MYCBPQ99417 103 aaPredicted RBP14.15□□□□□ -0.14
BDNF-218ENST00000533246 METP08581 1390 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 ERVK-7P63135 1459 aa14.15□□□□□ -0.14
BDNF-218ENST00000533246 SMTNL1A8MU46 457 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 ZNF652Q9Y2D9 606 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 GADD45BO75293 160 aaPredicted RBP14.14□□□□□ -0.15
BDNF-218ENST00000533246 MFSD6Q6ZSS7 791 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 WASF1Q92558 559 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 SNX14Q9Y5W7 946 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 CCDC171Q6TFL3 1326 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 SGSM2O43147 1006 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 TERF1P54274 439 aa14.14□□□□□ -0.15
BDNF-218ENST00000533246 SSRP1Q08945 709 aaKnown RBP14.14□□□□□ -0.15
BDNF-218ENST00000533246 MPHOSPH10O00566 681 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms