RNA–Protein interactions for RNA: ENST00000533001.1

KNL1-211, Transcript of kinetochore scaffold 1, humanhuman

TSL 1 (best)

Gene KNL1, Length 5,923 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-211ENST00000533001 HECTD1Q9ULT8 2610 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 ROCK2O75116 1388 aaKnown RBP2.62□□□□□ -1.99
KNL1-211ENST00000533001 IBTKQ9P2D0 1353 aaPredicted RBP2.62□□□□□ -1.99
KNL1-211ENST00000533001 ERBB4Q15303 1308 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 NTSR2O95665 410 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 RSPH6AQ9H0K4 717 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 GPBP1L1Q9HC44 474 aaPredicted RBP2.62□□□□□ -1.99
KNL1-211ENST00000533001 ZANQ9Y493 2812 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 SLC10A5Q5PT55 438 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 USPL1Q5W0Q7 1092 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 SUGP2Q8IX01 1082 aaKnown RBP eCLIP2.62□□□□□ -1.99
KNL1-211ENST00000533001 PELP1Q8IZL8 1130 aaKnown RBP2.62□□□□□ -1.99
KNL1-211ENST00000533001 DDX54Q8TDD1 881 aaKnown RBP2.62□□□□□ -1.99
KNL1-211ENST00000533001 ADGRA2Q96PE1 1338 aa2.62□□□□□ -1.99
KNL1-211ENST00000533001 PLEKHG5O94827 1062 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 ZNF34Q8IZ26 560 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 MYO9AB2RTY4 2548 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 SLC39A6Q13433 755 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 PTPN18Q99952 460 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 SLC52A2Q9HAB3 445 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 NLRP2Q9NX02 1062 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 COL1A1P02452 1464 aaPredicted RBP2.61□□□□□ -1.99
KNL1-211ENST00000533001 TRAF5O00463 557 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 GJA5P36382 358 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 LMOD2Q6P5Q4 547 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 KAZALD1Q96I82 304 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 BRIP1Q9BX63 1249 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 PROSER3Q2NL68 480 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 MPRIPQ6WCQ1 1025 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 RRAGCQ9HB90 399 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 SF3B2Q13435 895 aaKnown RBP2.61□□□□□ -1.99
KNL1-211ENST00000533001 CDAN1Q8IWY9 1227 aa2.61□□□□□ -1.99
KNL1-211ENST00000533001 A0A0G2JS52 829 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 A1BGP04217 495 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 EPS15P42566 896 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 PSMD1Q99460 953 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 ATXN8OSP0DMR3 200 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 GPR162Q16538 588 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 TEPSINQ96N21 525 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 APCP25054 2843 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 GNPATO15228 680 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 VEGFAP15692 232 aaPredicted RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 TXNRD3Q86VQ6 643 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 NLGN1Q8N2Q7 840 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 ZNF526Q8TF50 670 aaPredicted RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 FANCMQ8IYD8 2048 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 ZNFX1Q9P2E3 1918 aaKnown RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 MCM3APO60318 1980 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 SETD2Q9BYW2 2564 aaPredicted RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 CCDC24Q8N4L8 307 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 TLN1Q9Y490 2541 aaKnown RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 LMNB1P20700 586 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 LBX1P52954 281 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 LDLRAD1Q5T700 205 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 CSRNP1Q96S65 589 aa2.6□□□□□ -1.99
KNL1-211ENST00000533001 DDX21Q9NR30 783 aaKnown RBP eCLIP2.6□□□□□ -1.99
KNL1-211ENST00000533001 CCDC9Q9Y3X0 531 aaKnown RBP2.6□□□□□ -1.99
KNL1-211ENST00000533001 AKAP9Q99996 3911 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 SOX1O00570 391 aaPredicted RBP2.59□□□□□ -1.99
KNL1-211ENST00000533001 RNMTO43148 476 aaKnown RBP2.59□□□□□ -1.99
KNL1-211ENST00000533001 ZNF853P0CG23 659 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 TMF1P82094 1093 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 ZNF384Q8TF68 577 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 DOCK2Q92608 1830 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 CXCL9Q07325 125 aa2.59□□□□□ -1.99
KNL1-211ENST00000533001 MAP1SQ66K74 1059 aaPredicted RBP2.59□□□□□ -1.99
KNL1-211ENST00000533001 PRPF40BQ6NWY9 871 aaKnown RBP2.59□□□□□ -1.99
KNL1-211ENST00000533001 ATAD5Q96QE3 1844 aa2.59□□□□□ -2
KNL1-211ENST00000533001 RNF123Q5XPI4 1314 aa2.59□□□□□ -2
KNL1-211ENST00000533001 POTEFA5A3E0 1075 aa2.59□□□□□ -2
KNL1-211ENST00000533001 AOC2O75106 756 aa2.59□□□□□ -2
KNL1-211ENST00000533001 IL6STP40189 918 aaPredicted RBP2.59□□□□□ -2
KNL1-211ENST00000533001 FLAD1Q8NFF5 587 aa2.59□□□□□ -2
KNL1-211ENST00000533001 TLL2Q9Y6L7 1015 aa2.59□□□□□ -2
KNL1-211ENST00000533001 ZNF790Q6PG37 636 aa2.58□□□□□ -2
KNL1-211ENST00000533001 PCDHAC2Q9Y5I4 1007 aa2.58□□□□□ -2
KNL1-211ENST00000533001 SPTA1P02549 2419 aa2.58□□□□□ -2
KNL1-211ENST00000533001 USP9YO00507 2555 aaPredicted RBP2.58□□□□□ -2
KNL1-211ENST00000533001 PLXNA3P51805 1871 aa2.58□□□□□ -2
KNL1-211ENST00000533001 ZBTB22O15209 634 aa2.58□□□□□ -2
KNL1-211ENST00000533001 SERPINB2P05120 415 aa2.58□□□□□ -2
KNL1-211ENST00000533001 EVA1CP58658 441 aa2.58□□□□□ -2
KNL1-211ENST00000533001 MS4A4AQ96JQ5 239 aa2.58□□□□□ -2
KNL1-211ENST00000533001 WDR33Q9C0J8 1336 aaKnown RBP2.58□□□□□ -2
KNL1-211ENST00000533001 PLXNA1Q9UIW2 1896 aa2.58□□□□□ -2
KNL1-211ENST00000533001 IFNL2Q8IZJ0 200 aa2.58□□□□□ -2
KNL1-211ENST00000533001 GPRC5DQ9NZD1 345 aa2.58□□□□□ -2
KNL1-211ENST00000533001 MTORP42345 2549 aa2.58□□□□□ -2
KNL1-211ENST00000533001 LRRC37A2A6NM11 1700 aa2.58□□□□□ -2
KNL1-211ENST00000533001 TESPA1A2RU30 521 aaPredicted RBP2.58□□□□□ -2
KNL1-211ENST00000533001 SOX12O15370 315 aa2.58□□□□□ -2
KNL1-211ENST00000533001 CHADLQ6NUI6 762 aa2.58□□□□□ -2
KNL1-211ENST00000533001 TTLL7Q6ZT98 887 aa2.58□□□□□ -2
KNL1-211ENST00000533001 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP2.58□□□□□ -2
KNL1-211ENST00000533001 ITPR3Q14573 2671 aa2.58□□□□□ -2
KNL1-211ENST00000533001 PIP4K2AP48426 406 aaPredicted RBP2.58□□□□□ -2
KNL1-211ENST00000533001 ZNF280AP59817 542 aaPredicted RBP2.58□□□□□ -2
KNL1-211ENST00000533001 PIM2Q9P1W9 311 aa2.58□□□□□ -2
KNL1-211ENST00000533001 DAGLAQ9Y4D2 1042 aa2.58□□□□□ -2
KNL1-211ENST00000533001 MYH13Q9UKX3 1938 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms