RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 TRIM29Q14134 588 aa11□□□□□ -0.65
BDNF-216ENST00000532997 LLPHQ9BRT6 129 aaKnown RBP11□□□□□ -0.65
BDNF-216ENST00000532997 CTNNA3Q9UI47 895 aa11□□□□□ -0.65
BDNF-216ENST00000532997 PA2G4Q9UQ80 394 aaKnown RBP11□□□□□ -0.65
BDNF-216ENST00000532997 ANXA1P04083 346 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 LIG1P18858 919 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TSC1Q92574 1164 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TCEANC2Q96MN5 208 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 MRVI1Q9Y6F6 885 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 ROBO2Q9HCK4 1378 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TECPR2O15040 1411 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TPM1P09493 284 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 CDC25BP30305 580 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 ZSCAN25Q6NSZ9 544 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 MPRIPQ6WCQ1 1025 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 MAP4K1Q92918 833 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TPCN1Q9ULQ1 816 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 CCDC9Q9Y3X0 531 aaKnown RBP10.99□□□□□ -0.65
BDNF-216ENST00000532997 KDRP35968 1356 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 FAM177BA6PVY3 158 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 TAF7LQ5H9L4 462 aa10.99□□□□□ -0.65
BDNF-216ENST00000532997 USP42Q9H9J4 1324 aaKnown RBP10.98□□□□□ -0.65
BDNF-216ENST00000532997 Q6ZUG5 572 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 PHF8Q9UPP1 1060 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 SLU7O95391 586 aaKnown RBP10.98□□□□□ -0.65
BDNF-216ENST00000532997 SNW1Q13573 536 aaKnown RBP10.98□□□□□ -0.65
BDNF-216ENST00000532997 ERO1AQ96HE7 468 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 TBX22Q9Y458 520 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 U2AF2P26368 475 aaKnown RBP eCLIP10.98□□□□□ -0.65
BDNF-216ENST00000532997 ADCK5Q3MIX3 580 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 FAM227BQ96M60 508 aa10.98□□□□□ -0.65
BDNF-216ENST00000532997 CCDC69A6NI79 296 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 LARGE1O95461 756 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 MTX1Q13505 466 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 BMS1Q14692 1282 aaKnown RBP10.97□□□□□ -0.65
BDNF-216ENST00000532997 NECTIN1Q15223 517 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 MCMDC2Q4G0Z9 681 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 FAM173BQ6P4H8 233 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 IP6K1Q92551 441 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 TAOK2Q9UL54 1235 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 KNDC1Q76NI1 1749 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 NAA16Q6N069 864 aaPredicted RBP10.97□□□□□ -0.65
BDNF-216ENST00000532997 MRPS27Q92552 414 aaKnown RBP10.97□□□□□ -0.65
BDNF-216ENST00000532997 UBXN4Q92575 508 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 MRFAP1L1Q96HT8 127 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 FMNL2Q96PY5 1086 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 PLEKHG1Q9ULL1 1385 aa10.97□□□□□ -0.65
BDNF-216ENST00000532997 GTF3C6Q969F1 213 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 TRMT1Q9NXH9 659 aaKnown RBP10.96□□□□□ -0.65
BDNF-216ENST00000532997 AGLP35573 1532 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 SPATA31D1Q6ZQQ2 1576 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 SERPINC1P01008 464 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 FAM160A1Q05DH4 1040 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 CREBRFQ8IUR6 639 aa10.96□□□□□ -0.65
BDNF-216ENST00000532997 WASHC4Q2M389 1173 aa10.96□□□□□ -0.66
BDNF-216ENST00000532997 KCNG4Q8TDN1 519 aa10.96□□□□□ -0.66
BDNF-216ENST00000532997 MYD88Q99836 296 aa10.96□□□□□ -0.66
BDNF-216ENST00000532997 DDX21Q9NR30 783 aaKnown RBP eCLIP10.96□□□□□ -0.66
BDNF-216ENST00000532997 NRKQ7Z2Y5 1582 aa10.96□□□□□ -0.66
BDNF-216ENST00000532997 ZSCAN12O43309 604 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 SLC3A2P08195 630 aaKnown RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 MYL6BP14649 208 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 CWF19L2Q2TBE0 894 aaKnown RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 TMCO3Q6UWJ1 677 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 DHX32Q7L7V1 743 aaKnown RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 C8orf76Q96K31 380 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 CALCOCO1Q9P1Z2 691 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 IMPACTQ9P2X3 320 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 BICC1Q9H694 974 aaKnown RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 MON2Q7Z3U7 1717 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 CDKL5O76039 1030 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 ESCO1Q5FWF5 840 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 TMC6Q7Z403 805 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 AOPEPQ8N6M6 819 aa10.95□□□□□ -0.66
BDNF-216ENST00000532997 BCL11BQ9C0K0 894 aaPredicted RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 ALDH8A1Q9H2A2 487 aaPredicted RBP10.95□□□□□ -0.66
BDNF-216ENST00000532997 NPHP1O15259 732 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 GIGYF1O75420 1035 aaPredicted RBP10.94□□□□□ -0.66
BDNF-216ENST00000532997 TATP17735 454 aaPredicted RBP10.94□□□□□ -0.66
BDNF-216ENST00000532997 SAFBQ15424 915 aaKnown RBP eCLIP10.94□□□□□ -0.66
BDNF-216ENST00000532997 DACH1Q9UI36 760 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 PTPRUQ92729 1446 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 RNMTO43148 476 aaKnown RBP10.94□□□□□ -0.66
BDNF-216ENST00000532997 NR1I2O75469 434 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 LRMPQ12912 555 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 IMMTQ16891 758 aaKnown RBP10.94□□□□□ -0.66
BDNF-216ENST00000532997 FUCA2Q9BTY2 467 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 SRRTQ9BXP5 876 aaKnown RBP10.94□□□□□ -0.66
BDNF-216ENST00000532997 CACNA1FO60840 1977 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 PTPDC1A2A3K4 754 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 CCDC158Q5M9N0 1113 aa10.94□□□□□ -0.66
BDNF-216ENST00000532997 A0A0D9SFI3 127 aa10.93□□□□□ -0.66
BDNF-216ENST00000532997 GOLGA6L9A6NEM1 432 aa10.93□□□□□ -0.66
BDNF-216ENST00000532997 RICTORQ6R327 1708 aa10.93□□□□□ -0.66
BDNF-216ENST00000532997 EAF2Q96CJ1 260 aaPredicted RBP10.93□□□□□ -0.66
BDNF-216ENST00000532997 CCT2P78371 535 aaKnown RBP10.93□□□□□ -0.66
BDNF-216ENST00000532997 LRRC8AQ8IWT6 810 aa10.93□□□□□ -0.66
BDNF-216ENST00000532997 SUCLG2Q96I99 432 aa10.93□□□□□ -0.66
BDNF-216ENST00000532997 ATP5JP18859 108 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms